Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulomyxa_20filosa_20[genbank_20GCA_5F000512085.1_202013-12-30] 50,809 sequences; 101,867,045 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq42319 257 3e-66 seq36788 244 2e-62 seq5550 230 4e-58 seq25966 221 2e-55 seq5841 215 9e-54 seq5849 210 4e-52 seq5840 181 2e-43 seq13716 163 5e-38 seq47862 118 2e-24 seq33506 100 5e-19 >seq42319 Length=3671 Score = 257 bits (284), Expect = 3e-66 Identities = 226/282 (80%), Gaps = 0/282 (0%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||||||||||||| ||||||||||||| | |||| | ||||||||||||||||||| Sbjct 697 CCCACGCTTTCGCACCTCAGCGTCAGTATCGAGCCAGTGAGCCGCCTTCGCCACTGGTGT 638 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 ||||||| ||||||||| |||||||| |||||| ||||||||| | |||||| | | Sbjct 637 TCCTCCGAATATCTACGAATTTCACCTCTACACTCGGAATTCCACTCACCTCTCTCGACC 578 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 |||||| ||||||||| |||| ||||||||||| | |||||| |||||| Sbjct 577 TCAAGACTGGGAGTTTCAAAGGCAGTTCCGGGGTTGAGCCCCGGGATTTCACCCCTGACT 518 Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240 | || |||||||| || |||||| |||| ||| |||| | |||||| ||| ||| || Sbjct 517 TTCCAGTCCGCCTACGTGCGCTTTACGCCCAGTAATTCCGAACAACGCTAGCCCCCTCCG 458 Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282 |||||||||||||||||||||| ||||||||| ||||| ||| Sbjct 457 TATTACCGCGGCTGCTGGCACGGAGTTAGCCGGGGCTTCTTC 416 >seq36788 Length=1761 Score = 244 bits (270), Expect = 2e-62 Identities = 228/290 (79%), Gaps = 0/290 (0%) Strand=Plus/Plus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||||||||||||| ||||||||||||| | | |||| | ||||||||||||||||||| Sbjct 1348 CCCACGCTTTCGCACCTCAGCGTCAGTACCGGGCCAGTGAGCCGCCTTCGCCACTGGTGT 1407 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 || |||| ||||||||| |||||||| |||||| |||| |||| | ||||||| | || Sbjct 1408 TCTTCCGAATATCTACGAATTTCACCTCTACACTCGGAGTTCCACTCACCTCTCCCGGAC 1467 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 ||||| |||||| ||||| |||| ||||||||| | |||||| |||||| Sbjct 1468 TCAAGGTCAACAGTATCAAAGGCAGTTCCGAGGTTGAGCCTCGGGATTTCACCCCTGACT 1527 Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240 | |||||||| || |||||| |||| | | |||| | |||||| ||| ||| || Sbjct 1528 TATTGATCCGCCTACGTGCGCTTTACGCCCAGTGATTCCGAACAACGCTAGCCCCCTTCG 1587 Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 |||||||||||||||||||||| ||||||||| ||||| ||| | |||| Sbjct 1588 TATTACCGCGGCTGCTGGCACGAAGTTAGCCGGGGCTTCTTCTGCTGGTA 1637 >seq5550 Length=2568 Score = 230 bits (254), Expect = 4e-58 Identities = 225/290 (78%), Gaps = 0/290 (0%) Strand=Plus/Plus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 |||||||||||| || | ||||||||| | |||| |||||||||| ||||| Sbjct 1805 CCCACGCTTTCGTGCATGAGCGTCAGTACAGGCCCAGGGGATTGCCTTCGCCATCGGTGT 1864 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 ||||||| ||||||||||||||||| ||||||| ||||||||| ||||| | | || Sbjct 1865 TCCTCCGCATATCTACGCATTTCACTGCTACACGCGGAATTCCATCCCCCTCTACCGTAC 1924 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 || || | |||| |||| |||| |||||||||| | |||||| |||| || Sbjct 1925 TCTAGCTATGCAGTCACAAAGGCAGTTCCCAGGTTGAGCCCGGGGATTTCACCTCTGTCT 1984 Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240 ||| | |||||| | | | |||||| |||| ||| |||| ||||||| || |||||| Sbjct 1985 TGCATAACCGCCTGCGCACGCTTTACGCCCAGTAATTCCGATTAACGCTCGCACCCTACG 2044 Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 |||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct 2045 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGGTGCTTATTCTTCAGGTA 2094 >seq25966 Length=3938 Score = 221 bits (244), Expect = 2e-55 Identities = 223/290 (77%), Gaps = 0/290 (0%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 |||||||||||| || | ||||||||| | |||| | |||||||||| ||||| Sbjct 966 CCCACGCTTTCGTGCATGAGCGTCAGTGTCATCCCAGGGGGCTGCCTTCGCCATCGGTGT 907 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 ||||||| || |||||||||||||| ||||||| ||||||||| ||||| |||| Sbjct 906 TCCTCCGCATCTCTACGCATTTCACTGCTACACGCGGAATTCCACCCCCCTCTGACGCAC 847 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 || || |||||| |||| |||| ||||||| | | ||||||||||| || Sbjct 846 TCTAGTCTGACAGTTCCAAACGCAGTTCCCAAGTTGAGCTCGGGGATTTCACATCTGGCT 787 Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240 | | |||||| | | | |||||| |||| ||| |||| ||||||| || |||||| Sbjct 786 TATCAAACCGCCTGCGCACGCTTTACGCCCAGTAATTCCGATTAACGCTCGCACCCTACG 727 Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 |||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct 726 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGGTGCTTATTCTTCAGGTA 677 >seq5841 Length=1512 Score = 215 bits (238), Expect = 9e-54 Identities = 217/282 (77%), Gaps = 0/282 (0%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||||||||||||| |||||| |||||| | |||||| |||||||||||||||||| Sbjct 1372 CCCACGCTTTCGCACCTCAGTGTCAGTATCAGTCCAGGTGGTCGCCTTCGCCACTGGTGT 1313 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 |||| | ||||||||||||||||||||||||||| | |||||| ||||| | || Sbjct 1312 TCCTTCCTATATCTACGCATTTCACCGCTACACAGGAAATTCCACCACCCTCTACCATAC 1253 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 || || |||||| |||||| |||||||||| | ||||||||| ||| Sbjct 1252 TCTAGCTCGCCAGTTTTGGATGCAGTTCCCAGGTTGAGCCCGGGGCTTTCACATCCAACT 1193 Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240 | | || ||||| ||| |||||| |||| ||| |||| |||||||||| ||| | Sbjct 1192 TAACGAACCACCTACGCGCGCTTTACGCCCAGTAATTCCGATTAACGCTTGCACCCTCTG 1133 Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282 ||||||||||||||||||||| ||||||||| |||||||| Sbjct 1132 TATTACCGCGGCTGCTGGCACAGAGTTAGCCGGTGCTTATTC 1091 >seq5849 Length=3646 Score = 210 bits (232), Expect = 4e-52 Identities = 218/283 (77%), Gaps = 2/283 (1%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 |||||||||||| || |||||||||| || |||| | |||| ||||| | ||||| Sbjct 2739 CCCACGCTTTCGTGCAACAGCGTCAGTATCTAGCCAGATAGCCGCTTTCGCTTCCGGTGT 2680 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 |||||| ||||||||| |||||||| |||||| ||||||||| | |||||| ||||| Sbjct 2679 TCCTCCTAATATCTACGAATTTCACCTCTACACTAGGAATTCCGCTATCCTCTCTAGCAC 2620 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGG-GTTGAGCCCATAGTTTTCACATCTGAC 179 || || || |||||| || ||| | ||| ||||||| | | |||||| || || Sbjct 2619 TCTAGTCAAGCAGTTTTGAAAGCAAT-TCTGGAGTTGAGCTCCAGGATTTCACTTCCAAC 2561 Query 180 TTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTAC 239 || | | |||||| | | |||||| |||| ||| |||| ||| ||| ||| ||| | Sbjct 2560 TTACTAAACAGCCTACGCACGCTTTACGCCCAGTAATTCCGAGTAATGCTAGCCCCCTTC 2501 Query 240 GTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282 ||||||||||||||||||||||| ||||||||| ||||| ||| Sbjct 2500 GTATTACCGCGGCTGCTGGCACGAAGTTAGCCGGGGCTTTTTC 2458 >seq5840 Length=1738 Score = 181 bits (200), Expect = 2e-43 Identities = 179/229 (78%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 62 CCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACT 121 |||||| ||||||||||||||||| ||||||| ||||||||| ||||| | | ||| Sbjct 1738 CCTCCGCATATCTACGCATTTCACTGCTACACGCGGAATTCCATCCCCCTCTACCGTACT 1679 Query 122 CAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTT 181 | || | |||| |||||||||| |||| ||||| | ||||||||||| ||| Sbjct 1678 CTAGCTATGCAGTCACAAATGCAGGTCCCAGGTT-AGCCCGGGGATTTCACATCTGTCTT 1620 Query 182 GCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGT 241 | | |||||| | | | |||||| |||| ||| |||| ||||||| || ||||||| Sbjct 1619 ACATAACCGCCTGCGCACGCTTTACGCCCAGTAATTCCGATTAACGCT-GCACCCTACGT 1561 Query 242 ATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 ||||||||||||||||||||||||||||||| |||||||| | |||| Sbjct 1560 ATTACCGCGGCTGCTGGCACGTAGTTAGCCGGTGCTTATTCTTACGGTA 1512 >seq13716 Length=566 Score = 163 bits (180), Expect = 5e-38 Identities = 154/195 (79%), Gaps = 1/195 (1%) Strand=Plus/Plus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||||||||||||| ||||||||||||| | | |||| | ||||||||||||||||||| Sbjct 370 CCCACGCTTTCGCACCTCAGCGTCAGTATCGG-CCAGTGAGCCGCCTTCGCCACTGGTGT 428 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 ||||||| ||||||||| |||||||| |||||| ||||||||| | |||||| | | Sbjct 429 TCCTCCGAATATCTACGAATTTCACCTCTACACTCGGAATTCCACTCACCTCTCTCGACC 488 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 |||||| ||||||||| |||| ||||||||||| | |||||| |||||| Sbjct 489 TCAAGACTGGGAGTTTCAAAGGCAGTTCCGGGGTTGAGCCCCGGGATTTCACCCCTGACT 548 Query 181 TGCCTTCCCGCCTAC 195 | || |||||||| Sbjct 549 TTCCAGTCCGCCTAC 563 >seq47862 Length=579 Score = 118 bits (130), Expect = 2e-24 Identities = 88/103 (85%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 |||||| | | | |||||| |||| ||| |||| ||||||| || ||||||||||||| Sbjct 577 CCGCCTGCGCACGCTTTACGCCCAGTAATTCCGATTAACGCTCGCACCCTACGTATTACC 518 Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 ||||||||||||||||||||||||| |||||||| ||||||| Sbjct 517 GCGGCTGCTGGCACGTAGTTAGCCGGTGCTTATTCTTCAGGTA 475 >seq33506 Length=1068 Score = 100 bits (110), Expect = 5e-19 Identities = 78/93 (84%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 198 GCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTGCTG 257 || |||||| |||| ||| |||| | |||||| ||| ||| ||| ||||||||||||||| Sbjct 1068 GCGCTTTACGCCCAGTAATTCCGAACAACGCTAGCCCCCTTCGTCTTACCGCGGCTGCTG 1009 Query 258 GCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 ||||| ||||||||| ||||||||| | |||| Sbjct 1008 GCACGAAGTTAGCCGGGGCTTATTCTGCGGGTA 976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828392054539