Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulomyxa_20filosa_20[genbank_20GCA_5F000512085.1_202013-12-30] 50,809 sequences; 101,867,045 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq13840 145 8e-33 >seq13840 Length=1178 Score = 145 bits (160), Expect = 8e-33 Identities = 142/179 (79%), Gaps = 8/179 (4%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACATTACCATGGA 72 ||||| |||||||| | ||| |||| | ||||| ||| || |||||||||| |||||| Sbjct 903 TTTACCTTGAAAAATT--GAGTGTTCCAGGCAGGTCTTCGCCGGAATACATTAGCATGGA 846 Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132 ||||| ||||||||| || | | |||||| ||||| |||||| |||||||| | Sbjct 845 ATAATGGAATAGGACTTGGG----TCTTTTGTTGGTTT-TAGGACTTGA-GTAATGATTA 792 Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTATT 191 ||| ||| || ||||| | |||||| |||||||| |||||||||||||||||||||| Sbjct 791 ATAGGGACAGATGGGGGCATTAGTATTTAATTGTCAGAGGTGAAATTCTTGGATTTATT 733 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511747987360