Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulomyxa_20filosa_20[genbank_20GCA_5F000512085.1_202013-12-30] 50,809 sequences; 101,867,045 total letters Query= AAMG01001946.1 Length=179 Score E Sequences producing significant alignments: (Bits) Value seq35950 201 1e-49 seq22555 192 6e-47 seq20133 187 2e-45 seq5548 183 3e-44 seq2809 138 1e-30 seq21152 129 6e-28 seq32140 93.3 4e-17 seq43636 78.8 9e-13 >seq35950 Length=2181 Score = 201 bits (222), Expect = 1e-49 Identities = 138/156 (88%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||| Sbjct 106 GTTGAGCGATGGCCCTTCCATACAGAACCACCGGATCACTATGTCCTGCTTTCGCATCTG 165 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 ||||| |||| ||||||||| |||| |||||||||||||||||| | |||||||||| Sbjct 166 CTCGACTTGTCAGTCTCGCAGTTAAGCACGCTTATGCCATTGCACTATCGTCACGATGTC 225 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 ||||||| | |||| ||||||| ||||||||||| Sbjct 226 CGACCGTAACTAGCGTACCTTCGAACTCCTCCGTTA 261 >seq22555 Length=2992 Score = 192 bits (212), Expect = 6e-47 Identities = 136/156 (87%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||||||||||||||| ||||||||||||||||||| ||||| |||||| ||||| Sbjct 211 GTTGAGCGATGGCCCTTCCATACAGAACCACCGGATCACTAAGACCTACTTTCGTACCTG 270 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 ||||| ||| ||||||||| |||| |||| |||| ||||||||||| |||||||| Sbjct 271 CTCGACGTGTCTGTCTCGCAGTTAAGCTGGCTTCTGCCTTTGCACTAACCGTACGATGTC 330 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 ||||||| ||||| |||||||||||||||||||| Sbjct 331 CGACCGTACTTAGCCAACCTTCGTGCTCCTCCGTTA 366 >seq20133 Length=1753 Score = 187 bits (206), Expect = 2e-45 Identities = 135/156 (87%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 973 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGTCCTGCTTTCGCACCTG 1032 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 ||||| ||| ||||||||| |||| | ||| ||||||||||||| | |||||| || Sbjct 1033 CTCGACTTGTCGGTCTCGCAGTTAAGCTACCTTTTGCCATTGCACTATCAGCACGATTTC 1092 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 ||||||| ||| | ||||||| ||||||||||| Sbjct 1093 CGACCGTACCTAGGTAACCTTCGAACTCCTCCGTTA 1128 >seq5548 Length=810 Score = 183 bits (202), Expect = 3e-44 Identities = 134/156 (86%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||||||||||||||| |||||||||||||||||| || ||| |||||| ||||| Sbjct 705 GTTGAGCGATGGCCCTTCCATACAGAACCACCGGATCACTTTGTCCTACTTTCGTACCTG 646 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 ||||| |||| |||||||||||||| |||||||||| ||||||| | |||||| || Sbjct 645 CTCGACTTGTCAGTCTCGCAGTCAAGCACGCTTATGCCAATGCACTATCAACACGATTTC 586 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 ||||||| ||||| ||||||| ||||||||||| Sbjct 585 CGACCGTATTTAGCGTACCTTCGAACTCCTCCGTTA 550 >seq2809 Length=5502 Score = 138 bits (152), Expect = 1e-30 Identities = 127/160 (79%), Gaps = 7/160 (4%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 |||||| ||||||||||||| |||||||||| ||||||||||||| |||||| ||| Sbjct 3441 GTTGAGTGATGGCCCTTCCACACAGAACCACCAGATCACTATGACCGACTTTCGTCTCTG 3382 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCAC----GA 139 ||||| |||| ||||||||||| || |||||||||||||||||| || || || Sbjct 3381 CTCGACTTGTCAGTCTCGCAGTCAGGCAAGCTTATGCCATTGCACT---CTTACAGTTGA 3325 Query 140 TGTCCGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 | ||||||| | |||| ||||||| | ||||||||| Sbjct 3324 TTTCCGACCAACCTGAGCTTACCTTCGCACGCCTCCGTTA 3285 >seq21152 Length=2898 Score = 129 bits (142), Expect = 6e-28 Identities = 122/156 (78%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||||||||| || | ||||||||||||||||||| || |||||| |||| Sbjct 757 GTTGAGCGATGGCCCACTCACGCGGAACCACCGGATCACTATGGCCGACTTTCGTCCCTG 816 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 ||||| |||| ||||||||||| || |||| |||||||||||| | | |||| || Sbjct 817 CTCGACTTGTCAGTCTCGCAGTCAGGCGGGCTTGTGCCATTGCACTCAGCAGCCGATTTC 876 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 |||||| | ||| ||| ||| || ||||||||| Sbjct 877 CGACCGGCCTGAGCCCACCATCGCGCGCCTCCGTTA 912 >seq32140 Length=457 Score = 93.3 bits (102), Expect = 4e-17 Identities = 95/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 56 GGATCACTATGACCTGCTTTCGCACCTGCTCGAGCCGTCACTCTCGCAGTCAAGCCAGCT 115 ||||||||||| || |||||| |||||||| |||| ||| ||||||| || ||| Sbjct 457 GGATCACTATGGCCGACTTTCGTCTCTGCTCGACTTGTCAGTCTTGCAGTCAGGCTGGCT 398 Query 116 TATGCCATTGCACTAACCTCACGATGTCCGACCGTGATTAGCTGACCTTCGTGCTCCTCC 175 | |||||||||||| | | |||| |||||||| | ||| ||||||| || ||||| Sbjct 397 TCTGCCATTGCACTCAACGAGCGATTTCCGACCGCTCTGAGCCAACCTTCGCGCGCCTCC 338 Query 176 GTTA 179 |||| Sbjct 337 GTTA 334 >seq43636 Length=858 Score = 78.8 bits (86), Expect = 9e-13 Identities = 82/108 (76%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 72 CTTTCGCACCTGCTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAA 131 |||||| |||||||| |||| ||||||||||| || ||||||||||||||||| Sbjct 854 CTTTCGTCTCTGCTCGACTTGTCAGTCTCGCAGTCAGGCGGGCTTATGCCATTGCACTCG 795 Query 132 CCTCACGATGTCCGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 | |||| |||||||| | ||| ||| ||| || ||||||||| Sbjct 794 ACGACCGATTTCCGACCGGTCTGAGCCCACCATCGCGCGCCTCCGTTA 747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 473366888308