Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulomyxa_20filosa_20[genbank_20GCA_5F000512085.1_202013-12-30] 50,809 sequences; 101,867,045 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq5841 443 5e-122 seq25966 408 1e-111 seq47862 389 1e-105 seq5550 372 7e-101 seq5849 333 6e-89 seq5840 309 7e-82 seq33506 298 1e-78 seq42319 284 3e-74 seq36788 149 2e-33 >seq5841 Length=1512 Score = 443 bits (490), Expect = 5e-122 Identities = 347/415 (84%), Gaps = 20/415 (5%) Strand=Plus/Minus Query 1 GTACTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCC 60 || |||||||| |||||| ||||||||| |||||||||||||||| ||||||||| |||| Sbjct 1033 GTGCTTTACAATCCGAAGACCTTCTTCACACACGCGGCATGGCTGGATCAGGCTTTCGCC 974 Query 61 CATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCA 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 973 CATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCA 914 Query 121 GTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCC 180 ||||||||| ||||||||||| ||||||||||||||||||||| |||| ||||||||| | Sbjct 913 GTGTGGCTGATCATCCTCTCAAACCAGCTAGGGATCGTCGCCTTGGTGAGCCATTACCTC 854 Query 181 GCCAACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCT 240 ||||||||||||||||| | || |||||||||| | |||||||||||||| | || Sbjct 853 ACCAACTAGCTAATCCCACGTAGGCACATCCGATAGCATGTGGCCCGAAGGTCCCACACT 794 Query 241 TTGGTCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCA 300 |||||| ||| ||||||||||||| | |||||||| | |||||||||| ||| Sbjct 793 TTGGTCCGTAGACATTATGCGGTATTAACAGTCGTTTCCAACTGGTATCCCCCTCTATCG 734 Query 301 GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACT-CGTCAGCGAAGCAGCAAGCTGCT 359 || || |||| | ||||||||||||||||||| || ||| |||| || | Sbjct 733 GGTAGCTTCCTACGCATTACTCACCCGTCCGCCGCTAGGTC--CGAA-----AACC---- 685 Query 360 TCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 684 --------CCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 638 >seq25966 Length=3938 Score = 408 bits (452), Expect = 1e-111 Identities = 343/416 (82%), Gaps = 10/416 (2%) Strand=Plus/Minus Query 1 GTACTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCC 60 || ||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||| Sbjct 627 GTCCTTTACAACCCGAAGGCCTTCTTCAGACACGCGGCATGGCTGGATCAGGCTTTCGCC 568 Query 61 CATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCA 120 |||||| ||| |||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct 567 CATTGTCCAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCA 508 Query 121 GTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCC 180 ||||||| | ||||||||||||||| |||| |||||||||||||||| ||| ||||| | Sbjct 507 GTGTGGCGGATCATCCTCTCAGACCCGCTACTGATCGTCGCCTAGGTGAGCCTTTACCTC 448 Query 181 GCCAACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCT 240 || ||||||||||| | | || || |||| | |||||||||||||||||| || Sbjct 447 ACCTACTAGCTAATCAGACGTCGGCCGCTCGAATAGCGTGAGGCCCGAAGGTCCCCCACT 388 Query 241 TTGGTCTTGCG-ACGTTATGCGGTATTAGC-CACCGTTTCCAGTGGTTATCCCCCTCCAT 298 || | | | ||| |||||||||||||| || | |||| |||||||||| | | Sbjct 387 TTCTACCTCAGTACG-TATGCGGTATTAGCACAAC-TTTCGCTGCGTTATCCCCCACTAC 330 Query 299 CAGGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGC 358 |||| |||| | |||||||||||||| ||||||||||||||| ||| || Sbjct 329 TCGGCACGTTCCGACGCATTACTCACCCGTTCGCCACTCGTCAGCGGTGCA------AGC 276 Query 359 TTCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 |||||||||||||||||||||||||| | || |||||||||||||||||||||| Sbjct 275 ACCCTGTTACCGTTCGACTTGCATGTGTAAAGCATGCCGCCAGCGTTCAATCTGAG 220 >seq47862 Length=579 Score = 389 bits (430), Expect = 1e-105 Identities = 335/414 (81%), Gaps = 8/414 (2%) Strand=Plus/Minus Query 1 GTACTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCC 60 || ||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||| Sbjct 425 GTCCTTTACAACCCGAAGGCCTTCTTCAGACACGCGGCATGGCTGGATCAGGCTTTCGCC 366 Query 61 CATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCA 120 |||||| ||| |||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct 365 CATTGTCCAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCA 306 Query 121 GTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCC 180 |||||||||||| ||||||||||||||||| |||||| | || |||||||| ||||||| Sbjct 305 GTGTGGCTGGTCGTCCTCTCAGACCAGCTACAGATCGTTGGCTTGGTGGGCCTTTACCCC 246 Query 181 GCCAACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCT 240 ||||||| |||||| || | || ||| || | | |||| | | |||||| || Sbjct 245 ACCAACTACCTAATCTGATATCGGCCGCTCCAATTGCGCGAGGTCTTGCGATCCCCCGCT 186 Query 241 TTGGTCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCA 300 || | | | |||||||||||||| | |||| || |||||||||| | | Sbjct 185 TTCACCCTCAGGTCGTATGCGGTATTAGCTGCTCTTTCGAGCAGTTATCCCCCACAACTG 126 Query 301 GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTT 360 |||| |||| | ||||||||||||||| ||||||||||| || || | ||| Sbjct 125 GGCACGTTCCGATACATTACTCACCCGTTCGCCACTCGTC-GC-------CAGGTTGCCC 74 Query 361 CCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 | ||||||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct 73 CGCGTTACCGTTCGACTTGCATGTGTAAGGCATGCCGCCAGCGTTCAATCTGAG 20 >seq5550 Length=2568 Score = 372 bits (412), Expect = 7e-101 Identities = 329/410 (80%), Gaps = 8/410 (2%) Strand=Plus/Plus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 ||||||||||||||||||||||| ||||||||||||||| ||||| |||||| ||||| Sbjct 2148 TTTACAACCCGAAGGCCTTCTTCCCGCACGCGGCATGGCTGGATCAGACTTGCGTCCATT 2207 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 || ||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct 2208 GTCCAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGT 2267 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 |||||||| ||||||||||||||||| |||||| | || |||||||| ||||||| ||| Sbjct 2268 GGCTGGTCGTCCTCTCAGACCAGCTACAGATCGTTGGCTTGGTGGGCCTTTACCCCACCA 2327 Query 185 ACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGG 244 |||| |||||| || | || ||| || | | |||| | | |||||| |||| Sbjct 2328 ACTACCTAATCTGATATCGGCCGCTCCAATTGCGCGAGGTCTTGCGATCCCCCGCTTTCA 2387 Query 245 TCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCA 304 | | | |||||||||||||| | |||| || |||||||||| | | |||| Sbjct 2388 CCCTCAGGTCGTATGCGGTATTAGCTGCTCTTTCGAGCAGTTATCCCCCACAACTGGGCA 2447 Query 305 GTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTG 364 |||| | ||||||||||||||| ||||||||||| || || | ||| | | Sbjct 2448 CGTTCCGATACATTACTCACCCGTTCGCCACTCGTC-GC-------CAGGTTGCCCCGCG 2499 Query 365 TTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 |||||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct 2500 TTACCGTTCGACTTGCATGTGTAAGGCATGCCGCCAGCGTTCAATCTGAG 2549 >seq5849 Length=3646 Score = 333 bits (368), Expect = 6e-89 Identities = 325/414 (79%), Gaps = 21/414 (5%) Strand=Plus/Minus Query 4 CTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCAT 63 ||||||||||||||||||||| ||| |||||||| | |||| ||||||||||||||||| Sbjct 2422 CTTTACAACCCGAAGGCCTTCATCACTCACGCGGCGTCGCTGGATCAGGCTTGCGCCCAT 2363 Query 64 TGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTG 123 ||| |||||| |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 2362 TGTCCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTATCTCAGTTCCAGTG 2303 Query 124 TGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCC 183 |||||| |||||||||||||||||||| |||||| |||| ||| || ||||| | || Sbjct 2302 TGGCTGATCATCCTCTCAGACCAGCTAAAGATCGTTGCCTTGGTAAGCTTTTACCTCACC 2243 Query 184 AACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTG 243 |||||||||||| |||| |||||| |||| || |||||| Sbjct 2242 AACTAGCTAATCTTGCATGGGCTCATCC-------TTAGGCAATAA-------ATCTTTG 2197 Query 244 GTCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGC 303 || || | ||||||||||||||| |||||||| |||||||||| || ||| Sbjct 2196 ACCTCTCGGCATTATGCGGTATTAGCAGTCGTTTCCAACTGTTATCCCCCACCTAAGGGC 2137 Query 304 AGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTC-- 361 || |||||| |||||||||||||| |||||| | ||| || | | | |||| | Sbjct 2136 AGATTCCCATGTATTACTCACCCGTCTGCCACTAG-CAG-TAATCCGTA--TTGCTACGG 2081 Query 362 CTGTTAC-CGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 | |||| |||||||||||||||||||| || ||||||||| |||| |||||| Sbjct 2080 CACTTACTCGTTCGACTTGCATGTGTTAAGCACGCCGCCAGCATTCACTCTGAG 2027 >seq5840 Length=1738 Score = 309 bits (342), Expect = 7e-82 Identities = 316/412 (77%), Gaps = 34/412 (8%) Strand=Plus/Minus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 |||||||||||||||||||| || | ||||||||||||||| ||||||||| |||||||| Sbjct 1458 TTTACAACCCGAAGGCCTTCATCCTGCACGCGGCATGGCTGGATCAGGCTTTCGCCCATT 1399 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 || ||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct 1398 GTCCAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGT 1339 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 |||||||| ||||||||||||||||| ||||||||||| |||||||||||||||| ||| Sbjct 1338 GGCTGGTCGTCCTCTCAGACCAGCTACAGATCGTCGCCTTGGTGGGCCATTACCCCACCA 1279 Query 185 ACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGG 244 ||||||||||| | || ||||| | | || | || ||||| Sbjct 1278 ACTAGCTAATCGTACGCGGACTCATCTTTTGGCGATA------AA--------TCTTTAT 1233 Query 245 TC--TTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGG 302 | | | || || |||||||||| | |||||| | ||||| || ||| ||| Sbjct 1232 CCCGTAGGAAC--CATCCGGTATTAGCTCCAGTTTCCCGGAGTTATTCCGAACCAAAAGG 1175 Query 303 CAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCC 362 ||| | ||| | |||||||||||| |||||||||| | | |||| | Sbjct 1174 CAGATATCCACGCGTTACTCACCCGTGCGCCACTCGT----GTA--------TTGCTACA 1127 Query 363 TGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 | |||||||||||||||||||| ||||||||||||||||| |||||| Sbjct 1126 CG----CGTTCGACTTGCATGTGTTAAGCCTGCCGCCAGCGTTCGTTCTGAG 1079 >seq33506 Length=1068 Score = 298 bits (330), Expect = 1e-78 Identities = 314/413 (76%), Gaps = 34/413 (8%) Strand=Plus/Minus Query 4 CTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCAT 63 ||||||||||||||||||||| ||| ||||||||||||||| |||||| |||| ||||| Sbjct 948 CTTTACAACCCGAAGGCCTTCATCACTCACGCGGCATGGCTGGATCAGGGTTGCCCCCAT 889 Query 64 TGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTG 123 ||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct 888 TGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTG 829 Query 124 TGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCC 183 |||||| || ||||||||||||||||| ||||||||||| |||| ||||||||| | || Sbjct 828 TGGCTGATCGTCCTCTCAGACCAGCTAACGATCGTCGCCTTGGTGAGCCATTACCTCACC 769 Query 184 AACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTG 243 |||||||||||| | || ||||| | | || | || ||||| Sbjct 768 AACTAGCTAATCGTACGCGGACTCATCTTTTGGCGATA------AA--------TCTTTA 723 Query 244 GTC--TTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAG 301 | | | || || |||||||||| | |||||| | ||||| || ||| || Sbjct 722 TCCCGTAGGAAC--CATCCGGTATTAGCTCCAGTTTCCCGGAGTTATTCCGAACCAAAAG 665 Query 302 GCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTC 361 |||| | ||| | |||||||||||| |||||||||| | | |||| | Sbjct 664 GCAGATATCCACGCGTTACTCACCCGTGCGCCACTCGT----GTA--------TTGCTAC 617 Query 362 CTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 | |||||||||||||||||||| ||||||||||||||||| |||||| Sbjct 616 ACG----CGTTCGACTTGCATGTGTTAAGCCTGCCGCCAGCGTTCGTTCTGAG 568 >seq42319 Length=3671 Score = 284 bits (314), Expect = 3e-74 Identities = 309/411 (75%), Gaps = 32/411 (8%) Strand=Plus/Minus Query 4 CTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCAT 63 ||||||||||| ||||||||| || |||||||||||||| ||||||||||||||||| Sbjct 380 CTTTACAACCCTAAGGCCTTCATCGCTCACGCGGCATGGCTAGATCAGGCTTGCGCCCAT 321 Query 64 TGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTG 123 ||| || |||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct 320 TGTCTAAGATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTG 261 Query 124 TGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCC 183 |||||| ||||||||||| |||||||| ||||||||| || ||| |||||||||||| || Sbjct 260 TGGCTGATCATCCTCTCAAACCAGCTATGGATCGTCGGCTTGGTAGGCCATTACCCCACC 201 Query 184 AACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTG 243 ||||| ||||||| | ||| |||| | || | || | ||| | | Sbjct 200 AACTACCTAATCCAACGCGGGCCGATCCTTTGCCGATA------AATCTTTCCCCCGAAG 147 Query 244 GTCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGC 303 | | || || |||||||| | | |||||| | || ||| || || ||| Sbjct 146 GGC-----AC---ATACGGTATTACTCCCAGTTTCCCGAGGCTATTCCGTAGCAAAGGGC 95 Query 304 AGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCT 363 | |||||| | ||||||||||||||||| || | | ||||| |||| Sbjct 94 ACGTTCCCACGCGTTACTCACCCGTCCGCCGCTAG-GACCGAAG------------TCCT 48 Query 364 GTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 || ||||||||||||||||||||||||||||||||||| |||||| Sbjct 47 -----CGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCGTTCTGAG 2 >seq36788 Length=1761 Score = 149 bits (164), Expect = 2e-33 Identities = 91/97 (94%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 4 CTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCAT 63 ||||||||||| ||||||||| ||| ||||||||||||||| ||||||||||||||||| Sbjct 1665 CTTTACAACCCTAAGGCCTTCATCACTCACGCGGCATGGCTGGATCAGGCTTGCGCCCAT 1724 Query 64 TGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTC 100 ||| ||||||||||||||||||||||||||||||||| Sbjct 1725 TGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTC 1761 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1221778910784