Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulomyxa_20filosa_20[genbank_20GCA_5F000512085.1_202013-12-30] 50,809 sequences; 101,867,045 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq5849 376 7e-102 seq42319 369 1e-99 seq33506 358 2e-96 seq25966 336 7e-90 seq5840 309 9e-82 seq5841 300 5e-79 seq5550 300 5e-79 seq47862 295 2e-77 seq36788 277 5e-72 >seq5849 Length=3646 Score = 376 bits (416), Expect = 7e-102 Identities = 284/333 (85%), Gaps = 1/333 (0%) Strand=Plus/Plus Query 167 GATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAG 226 ||||||||||||||| |||||| |||||||||||| |||||| |||| | ||||||| Sbjct 2231 GATTAGCTAGTTGGTGAGGTAAAAGCTTACCAAGGCAACGATCTTTAGCTGGTCTGAGAG 2290 Query 227 GGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGG 286 | ||||| |||||| ||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 2291 GATGATCAGCCACACTGGAACTGAGATACGGTCCAGACTCCTACGGGAGGCAGCAGTGGG 2350 Query 287 GAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCCTT 346 | |||||| ||||||||| ||||||||| |||| |||||||||||| |||||||||||| Sbjct 2351 GGATATTGGACAATGGGCGCAAGCCTGATCCAGCGACGCCGCGTGAGTGATGAAGGCCTT 2410 Query 347 CGGGTCGTAAAGCTCTGTCCTCAAGGAAGATAATGACGGTACTTGAGGAGGAAGCCCCGG 406 ||||| |||||||||| | | ||||| |||||||||| || ||||||||| Sbjct 2411 CGGGTTGTAAAGCTCTTTTAGTGGGAAAGATTATGACGGTACCCACAGAAAAAGCCCCGG 2470 Query 407 CTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTG 466 |||||| |||||||||||||||||||||||| ||||||||||| ||| |||||||||| Sbjct 2471 CTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGGGCTAGCATTACTCGGAATTACT- 2529 Query 467 GGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGT 499 |||||||||| ||||||||| |||| ||||| Sbjct 2530 GGGCGTAAAGCGTGCGTAGGCTGTTTAGTAAGT 2562 >seq42319 Length=3671 Score = 369 bits (408), Expect = 1e-99 Identities = 290/346 (84%), Gaps = 1/346 (0%) Strand=Plus/Plus Query 144 CGGTACAGGATAGACCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCG 203 ||| | ||||| | ||||||| |||||| |||||||| ||||| ||| ||||||| || Sbjct 166 CGGCAAAGGATCGGCCCGCGTTGGATTAGGTAGTTGGTGGGGTAATGGCCTACCAAGCCG 225 Query 204 ACGATCAGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAA 263 |||||| |||| | ||||||| ||||| |||||| ||| |||||||||||| ||| | Sbjct 226 ACGATCCATAGCTGGTTTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGA 285 Query 264 CTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAAC 323 ||||||||||||||||||||||||||| || ||||||||| ||||||||| ||| | Sbjct 286 CTCCTACGGGAGGCAGCAGTGGGGAATCTTAGACAATGGGCGCAAGCCTGATCTAGCCAT 345 Query 324 GCCGCGTGAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGATAATGAC 383 ||||||||||||||||||||||| |||| |||||||||| || ||||||||||||| Sbjct 346 GCCGCGTGAGCGATGAAGGCCTTAGGGTTGTAAAGCTCTTTCAGTGGGGAAGATAATGAC 405 Query 384 GGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGG 443 ||||| || |||||||||||||||| |||||||||||||||||||||||| ||||| Sbjct 406 GGTACCCACAGAAGAAGCCCCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGG 465 Query 444 GCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGG 489 ||||||||| | |||||||||| |||||||||| | |||||| || Sbjct 466 GCTAGCGTTGTTCGGAATTACT-GGGCGTAAAGCGCACGTAGGCGG 510 >seq33506 Length=1068 Score = 358 bits (396), Expect = 2e-96 Identities = 271/318 (85%), Gaps = 1/318 (0%) Strand=Plus/Plus Query 159 CCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGA 218 |||||| ||||||||||||||| |||||| |||| ||||||||||||||| |||| | Sbjct 749 CCGCGTACGATTAGCTAGTTGGTGAGGTAATGGCTCACCAAGGCGACGATCGTTAGCTGG 808 Query 219 CCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCA 278 |||||||| |||| |||||| ||| |||||||||||| ||| |||||||||||||||| Sbjct 809 TCTGAGAGGACGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCA 868 Query 279 GCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATG 338 |||||||||||||||| |||||||| || |||||| |||| | |||||||||| |||| Sbjct 869 GCAGTGGGGAATATTGGACAATGGGGGCAACCCTGATCCAGCCATGCCGCGTGAGTGATG 928 Query 339 AAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGATAATGACGGTACTTGAGGAGGA 398 ||||||||||||| |||||||||| | | ||| ||| |||||||||| | || | Sbjct 929 AAGGCCTTCGGGTTGTAAAGCTCTTTTGGCGGGGACGATGATGACGGTACCCGCAGAATA 988 Query 399 AGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGG 458 |||||||||||||| |||||||||||||||||||| ||| |||||||||||||| | ||| Sbjct 989 AGCCCCGGCTAACTTCGTGCCAGCAGCCGCGGTAAGACGAAGGGGGCTAGCGTTGTTCGG 1048 Query 459 AATTACTGGGGCGTAAAG 476 ||||||| |||||||||| Sbjct 1049 AATTACT-GGGCGTAAAG 1065 >seq25966 Length=3938 Score = 336 bits (372), Expect = 7e-90 Identities = 379/507 (75%), Gaps = 33/507 (7%) Strand=Plus/Plus Query 19 GAAGAGCGGCGGACGGGTGAGTAACGCGTGGGTAACCTGCCCTGTACACACGGATAACAT 78 || ||| |||| |||||||||||| |||| || ||| |||| ||| ||||||| Sbjct 288 GACGAGTGGCGAACGGGTGAGTAATGCGTCGG-AACGTGCCGAGTAGTGGGGGATAACGC 346 Query 79 ACCGAAAGGTATGCTAATACGAGATAATATACTTTTATCGCA--TGGTAGAAGTATCAAA 136 | |||||| | ||||||||| ||| |||| | | | ||| || | || Sbjct 347 AGCGAAAGTTGTGCTAATACCGCATACG-TACTGAGGTAGAAAGTGGGGGACCT-TCGGG 404 Query 137 GCTCCGGCGGTACAGGATAGACCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTAC 196 ||| || | | || | || |||||||||||||||| ||| |||||| |||| || Sbjct 405 CCTCACGCTATTC--GAGCGGCCGACGTCTGATTAGCTAGTAGGTGAGGTAAAGGCTCAC 462 Query 197 CAAGGCGACGATCAGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACG 256 | ||||||||||||||||| | |||||||| ||||| |||||| ||| ||||||||||| Sbjct 463 CTAGGCGACGATCAGTAGCGGGTCTGAGAGGATGATCCGCCACACTGGGACTGAGACACG 522 Query 257 GTCCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATG 316 | ||| |||||||||||||||||||||||||||| ||| ||||||||| |||||||||| Sbjct 523 GCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGCGAAAGCCTGATC 582 Query 317 CAGCAACGCCGCGTGAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA 376 |||| | |||||||| || |||||||||||||| |||||| || | ||| ||| || Sbjct 583 CAGCCATGCCGCGTGTCTGAAGAAGGCCTTCGGGTTGTAAAGGACTTTTGTCAGGGAGGA 642 Query 377 TA-------------------------ATGACGGTACTTGAGGAGGAAGCCCCGGCTAAC 411 | ||||| |||| ||| || |||| ||||||||| Sbjct 643 AATCCCTAGCGTTAATACCGCTGGGGGATGACAGTACCTGAAGAATAAGCACCGGCTAAC 702 Query 412 TACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGGCG 471 ||||||||||||||||||||||||||||||| || ||||||| |||||||||| ||||| Sbjct 703 TACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTAATCGGAATTACT-GGGCG 761 Query 472 TAAAGGGTGCGTAGGTGGTTTCTTAAG 498 ||||| ||||| ||| ||||| |||| Sbjct 762 TAAAGCGTGCGCAGGCGGTTTGATAAG 788 >seq5840 Length=1738 Score = 309 bits (342), Expect = 9e-82 Identities = 283/358 (79%), Gaps = 27/358 (8%) Strand=Plus/Plus Query 159 CCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGA 218 |||||| ||||||||||||||| ||||| ||| ||||||||||||||| ||||| | Sbjct 1260 CCGCGTACGATTAGCTAGTTGGTGGGGTAATGGCCCACCAAGGCGACGATCTGTAGCTGG 1319 Query 219 CCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCA 278 |||||||| || | |||||| ||| |||||||||||| ||| |||||||||||||||| Sbjct 1320 TCTGAGAGGACGACCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCA 1379 Query 279 GCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATG 338 |||||||||||| ||| ||||||||| |||||||||| |||| | |||||||| |||| Sbjct 1380 GCAGTGGGGAATTTTGGACAATGGGCGAAAGCCTGATCCAGCCATGCCGCGTGCAGGATG 1439 Query 339 AAGGCCTTCGGGTCGTAAA--GC-TCTGTCCTCAAGGAA--------------------- 374 ||||||||||||| ||||| || | ||| | || ||| Sbjct 1440 AAGGCCTTCGGGTTGTAAACTGCTTTTGTACGGAACGAAACGGCGAGCTCTAATACAGTT 1499 Query 375 -GATAATGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAA 433 | |||||||||||| | || |||| ||||||||||||||||||||||||||||||| Sbjct 1500 TGCTAATGACGGTACCGTAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAA 1559 Query 434 TACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTT 491 ||||||||| || ||||||| |||||||||| |||||||||| ||||| ||| |||| Sbjct 1560 TACGTAGGGTGC-AGCGTTAATCGGAATTACT-GGGCGTAAAGCGTGCGCAGGCGGTT 1615 >seq5841 Length=1512 Score = 300 bits (332), Expect = 5e-79 Identities = 280/358 (78%), Gaps = 26/358 (7%) Strand=Plus/Plus Query 167 GATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAG 226 ||||||||||||||| |||||| |||| ||||||||||||||| |||| | |||||| Sbjct 839 GATTAGCTAGTTGGTGAGGTAATGGCTCACCAAGGCGACGATCCCTAGCTGGTTTGAGAG 898 Query 227 GGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGG 286 | ||||| |||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct 899 GATGATCAGCCACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAGTGGG 958 Query 287 GAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCCTT 346 |||||||| ||||||||| |||||||||| |||| | |||||||| | || ||||| ||| Sbjct 959 GAATATTGGACAATGGGCGAAAGCCTGATCCAGCCATGCCGCGTGTGTGAAGAAGGTCTT 1018 Query 347 CGGGTCGTAAAGCTCT----GTCCTCA--------AGGAAGATAA-------------TG 381 ||| | ||||||| || || | || ||| ||| || Sbjct 1019 CGGATTGTAAAGCACTTTAAGTTGGGAGGAAGGGCAGTAAGTTAATACCTTGCTGTTTTG 1078 Query 382 ACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGG 441 ||| ||| || |||| |||||||||| |||||||||||||||||||||| ||| Sbjct 1079 ACGTTACCGACAGAATAAGCACCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGG 1138 Query 442 GGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGT 499 | || ||||||| |||||||||| |||||||||| | |||||||||||| |||||| Sbjct 1139 GTGCAAGCGTTAATCGGAATTACT-GGGCGTAAAGCGCGCGTAGGTGGTTCGTTAAGT 1195 >seq5550 Length=2568 Score = 300 bits (332), Expect = 5e-79 Identities = 275/353 (78%), Gaps = 26/353 (7%) Strand=Plus/Minus Query 164 TCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGA 223 || |||||| |||||||| ||||| ||| |||||| | |||||| ||||| | |||| Sbjct 2341 TCAGATTAGGTAGTTGGTGGGGTAAAGGCCCACCAAGCCAACGATCTGTAGCTGGTCTGA 2282 Query 224 GAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGT 283 |||| || | |||||| ||| |||||||||||| ||| ||||||||||||||||||||| Sbjct 2281 GAGGACGACCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGT 2222 Query 284 GGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGC 343 ||||||| ||| ||||||| | ||| ||||| |||| | |||||||| | || |||||| Sbjct 2221 GGGGAATTTTGGACAATGGACGCAAGTCTGATCCAGCCATGCCGCGTGCGGGAAGAAGGC 2162 Query 344 CTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA-------------------------TA 378 |||||||| ||||| | || | ||| |||||| || Sbjct 2161 CTTCGGGTTGTAAACCGCTTTTGTCAGGGAAGAAACGGTCTGGGTTAATACCTCGGGCTA 2102 Query 379 ATGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGT 438 |||||||||| ||| || |||| |||||||||||||||||||||||||||||||||||| Sbjct 2101 ATGACGGTACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGT 2042 Query 439 AGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTT 491 |||| || ||||||| |||||||||| |||||||||| ||||| ||| |||| Sbjct 2041 AGGGTGCGAGCGTTAATCGGAATTACT-GGGCGTAAAGCGTGCGCAGGCGGTT 1990 >seq47862 Length=579 Score = 295 bits (326), Expect = 2e-77 Identities = 274/353 (78%), Gaps = 26/353 (7%) Strand=Plus/Plus Query 164 TCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGA 223 || |||||| |||||||| ||||| ||| |||||| | |||||| ||||| | |||| Sbjct 228 TCAGATTAGGTAGTTGGTGGGGTAAAGGCCCACCAAGCCAACGATCTGTAGCTGGTCTGA 287 Query 224 GAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGT 283 |||| || | |||||| ||| |||||||||||| ||| ||||||||||||||||||||| Sbjct 288 GAGGACGACCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGT 347 Query 284 GGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGC 343 ||||||| ||| ||||||||| |||||||||| |||| | |||||||| || |||||| Sbjct 348 GGGGAATTTTGGACAATGGGCGAAAGCCTGATCCAGCCATGCCGCGTGTCTGAAGAAGGC 407 Query 344 CTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGATA------------------------- 378 |||||||| |||||| || | ||| ||| || | Sbjct 408 CTTCGGGTTGTAAAGGACTTTTGTCAGGGAGGAAATCCCTAGCGTTAATACCGCTGGGGG 467 Query 379 ATGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGT 438 ||||| |||| ||| || |||| |||||||||||||||||||||||||||||||||||| Sbjct 468 ATGACAGTACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGT 527 Query 439 AGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTT 491 |||| || ||||||| |||||||||| |||||||||| ||||| ||| |||| Sbjct 528 AGGGTGCGAGCGTTAATCGGAATTACT-GGGCGTAAAGCGTGCGCAGGCGGTT 579 >seq36788 Length=1761 Score = 277 bits (306), Expect = 5e-72 Identities = 205/238 (86%), Gaps = 1/238 (0%) Strand=Plus/Minus Query 263 ACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAA 322 |||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||| | Sbjct 1760 ACTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGGCGCAAGCCTGATCCAGCCA 1701 Query 323 CGCCGCGTGAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGATAATGA 382 |||||||||| |||||||||||| |||| |||||||||| || | |||||||||||| Sbjct 1700 TGCCGCGTGAGTGATGAAGGCCTTAGGGTTGTAAAGCTCTTTCAGCTGGGAAGATAATGA 1641 Query 383 CGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGG 442 |||||| | || |||||||||||||||| |||||||||||||||||||||||| |||| Sbjct 1640 CGGTACCAGCAGAAGAAGCCCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGG 1581 Query 443 GGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500 |||||||||| | |||||| ||| |||||||||| | |||||| || | |||||| Sbjct 1580 GGCTAGCGTTGTTCGGAATCACT-GGGCGTAAAGCGCACGTAGGCGGATCAATAAGTC 1524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1496839084416