Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulomyxa_20filosa_20[genbank_20GCA_5F000512085.1_202013-12-30] 50,809 sequences; 101,867,045 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq42319 408 1e-111 seq36788 408 1e-111 seq5841 363 4e-98 seq5849 358 2e-96 seq25966 342 1e-91 seq5550 340 4e-91 seq13716 280 4e-73 seq5840 203 8e-50 seq47862 136 1e-29 seq33506 118 3e-24 >seq42319 Length=3671 Score = 408 bits (452), Expect = 1e-111 Identities = 331/400 (83%), Gaps = 2/400 (1%) Strand=Plus/Plus Query 9 GAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTA 68 || |||||||||||||||| |||||||||||||||||||||||| |||||||||||||| Sbjct 416 GAAGAAGCCCCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGGGCTAGCGTTG 475 Query 69 TCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCT 128 | |||||||||||||||||||| | |||||| || | ||||||| ||||||| | Sbjct 476 TTCGGAATTACTGGGCGTAAAGCGCACGTAGGCGGACTGGAAAGTCAGGGGTGAAATCCC 535 Query 129 ATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTG 188 ||||||||||||| ||||| ||||||||| | | || ||| | ||| || |||| Sbjct 536 GGGGCTCAACCCCGGAACTGCCTTTGAAACTCCCAGTCTTGAGGTCGAGAGAGGTGAGTG 595 Query 189 GAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCG 248 ||||||| ||||||| |||||||| |||||||||| |||||||||||||||||||||||| Sbjct 596 GAATTCCGAGTGTAGAGGTGAAATTCGTAGATATTCGGAGGAACACCAGTGGCGAAGGCG 655 Query 249 GCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGAT 308 ||| |||| | |||||| |||||| |||||||||||||||||||||||||||||| Sbjct 656 GCTCACTGGCTCGATACTGACGCTGAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAGAT 715 Query 309 ACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGCTCCG 368 |||||||||||||||||| |||||||||||| | || |||||| |||| | | || Sbjct 716 ACCCTGGTAGTCCACGCCCTAAACGATGAATGCCAGACGTCGGGCAGCAT--GCTGTTCG 773 Query 369 GTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 ||| | || | |||| | |||| ||||| ||||||||||| Sbjct 774 GTGTCACACCTAACGGATTAAGCATTCCGCCTGGGGAGTA 813 >seq36788 Length=1761 Score = 408 bits (452), Expect = 1e-111 Identities = 331/400 (83%), Gaps = 2/400 (1%) Strand=Plus/Minus Query 9 GAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTA 68 || |||||||||||||||| |||||||||||||||||||||||| |||||||||||||| Sbjct 1629 GAAGAAGCCCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTTG 1570 Query 69 TCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCT 128 | |||||| ||||||||||||| | |||||| || | |||||||| ||||||| | Sbjct 1569 TTCGGAATCACTGGGCGTAAAGCGCACGTAGGCGGATCAATAAGTCAGGGGTGAAATCCC 1510 Query 129 ATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTG 188 ||||||||| ||| ||||| ||||| |||| | || |||| | |||| || |||| Sbjct 1509 GAGGCTCAACCTCGGAACTGCCTTTGATACTGTTGACCTTGAGTCCGGGAGAGGTGAGTG 1450 Query 189 GAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCG 248 ||| ||| ||||||| |||||||| |||||||||| ||| |||||||||||||||||||| Sbjct 1449 GAACTCCGAGTGTAGAGGTGAAATTCGTAGATATTCGGAAGAACACCAGTGGCGAAGGCG 1390 Query 249 GCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGAT 308 ||| |||| | | |||||| |||||| |||||||||||||||||||||||||||||| Sbjct 1389 GCTCACTGGCCCGGTACTGACGCTGAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAGAT 1330 Query 309 ACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGCTCCG 368 |||||||||||||||||||||||||||| | |||| |||||| |||| | | || Sbjct 1329 ACCCTGGTAGTCCACGCCGTAAACGATGGAAGCTAGCCGTCGGGCAGCAT--GCTGTTCG 1272 Query 369 GTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 ||| |||||| |||||| |||| | || ||||||||||| Sbjct 1271 GTGGCGCAGCTAACGCATTAAGCTTCCCGCCTGGGGAGTA 1232 >seq5841 Length=1512 Score = 363 bits (402), Expect = 4e-98 Identities = 319/396 (81%), Gaps = 1/396 (0%) Strand=Plus/Plus Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72 |||| |||||||||| |||||||||||||||||||||| |||| || ||||||| || Sbjct 1095 AAGCACCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGGTGCAAGCGTTAATCG 1154 Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132 |||||||||||||||||| | |||||||||||| |||||| || ||||||| | || Sbjct 1155 GAATTACTGGGCGTAAAGCGCGCGTAGGTGGTTCGTTAAGTTGGATGTGAAAGCCCCGGG 1214 Query 133 CTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAAT 192 ||||||| || ||||| | |||||| | |||||||| | || || ||||||| Sbjct 1215 CTCAACCTGGGAACTGCATCCAAAACTGGCGAGCTAGAGTATGGTAGAGGGTGGTGGAAT 1274 Query 193 TCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTT 252 | | ||||||||||||||||||||||||| | |||||||||||||||||||||| | Sbjct 1275 TTCCTGTGTAGCGGTGAAATGCGTAGATATAGGAAGGAACACCAGTGGCGAAGGCGACCA 1334 Query 253 GCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCC 312 |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1335 CCTGGACTGATACTGACACTGAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCC 1394 Query 313 TGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGCTCCGGTGC 372 |||||||||||||||||||||||| ||||| || || | | || | ||| Sbjct 1395 TGGTAGTCCACGCCGTAAACGATGTCAACTAGCCGTTGGAATCCTTGAG-ATTTTAGTGG 1453 Query 373 CGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 |||||| |||||| ||||| || ||||||||||| Sbjct 1454 CGCAGCTAACGCATTAAGTTGACCGCCTGGGGAGTA 1489 >seq5849 Length=3646 Score = 358 bits (396), Expect = 2e-96 Identities = 318/396 (80%), Gaps = 4/396 (1%) Strand=Plus/Plus Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72 ||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||| || Sbjct 2462 AAGCCCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGGGCTAGCATTACTCG 2521 Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132 |||||||||||||||||| ||||||||| |||| ||||| || |||||| || | Sbjct 2522 GAATTACTGGGCGTAAAGCGTGCGTAGGCTGTTTAGTAAGTTGGAAGTGAAATCCTGGAG 2581 Query 133 CTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAAT 192 |||||| || | | |||||| ||||||| | ||||||||| ||| || || ||||| Sbjct 2582 CTCAACTCCAGAATTGCTTTCAAAACTGCTTGACTAGAGTGCTAGAGAGGATAGCGGAAT 2641 Query 193 TCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTT 252 ||||||||||| |||||||| |||||||||||||||||||||| | ||||| |||||| Sbjct 2642 TCCTAGTGTAGAGGTGAAATTCGTAGATATTAGGAGGAACACCGGAAGCGAAAGCGGCTA 2701 Query 253 GCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCC 312 |||| | |||||| ||| || |||||||||||||| ||||||||||||||||||| Sbjct 2702 TCTGGCTAGATACTGACGCTGTTGCACGAAAGCGTGGGGATCAAACAGGATTAGATACCC 2761 Query 313 TGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGCTCCGGTGC 372 ||||||||||||| ||||||||||| |||| | | || | | || || ||| Sbjct 2762 TGGTAGTCCACGCAGTAAACGATGAGCGCTAGATATTAGGAC---TTAGATCT-TAGTGT 2817 Query 373 CGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 || ||| ||||| |||| ||| ||||||||||| Sbjct 2818 CGTAGCTAACGCGTTAAGCGCTCCGCCTGGGGAGTA 2853 >seq25966 Length=3938 Score = 342 bits (378), Expect = 1e-91 Identities = 321/408 (79%), Gaps = 2/408 (0%) Strand=Plus/Plus Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 60 ||| ||| || |||| |||||||||||||||||||||||||||||||||||||||| || Sbjct 677 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 736 Query 61 TAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGT 120 ||||||| |||||||||||||||||||| ||||| ||| ||||| |||| |||| || Sbjct 737 GAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTTGATAAGCCAGATGT 796 Query 121 GAAAGGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGG 180 |||| | ||||||| || ||||| |||| ||||| | ||||||||| || Sbjct 797 GAAATCCCCGAGCTCAACTTGGGAACTGCGTTTGGAACTGTCAGACTAGAGTGCGTCAGA 856 Query 181 GGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGG 240 || |||||||||| ||||||| |||||||||||||| || ||||||||||| ||| Sbjct 857 GGGGGGTGGAATTCCGCGTGTAGCAGTGAAATGCGTAGAGATGCGGAGGAACACCGATGG 916 Query 241 CGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAG 300 ||||||| || |||| || |||||| || | || |||||||||||||||||||||| Sbjct 917 CGAAGGCAGCCCCCTGGGATGACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 976 Query 301 GATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAA 360 |||||||||||||||||||||||||| ||||||||| | ||| ||| |||| | || Sbjct 977 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATGTCAATTAGCTGTTGGGGGTTAGAA 1036 Query 361 GTGCTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 | | ||| || ||| ||||| || | || ||||||||||| Sbjct 1037 --TCCCTGGTAGCGTAGCTAACGCGTGAAATTGACCGCCTGGGGAGTA 1082 >seq5550 Length=2568 Score = 340 bits (376), Expect = 4e-91 Identities = 291/355 (82%), Gaps = 6/355 (2%) Strand=Plus/Minus Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 60 ||| ||| || |||| |||||||||||||||||||||||||||||||||||||||| || Sbjct 2094 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 2035 Query 61 TAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGT 120 ||||||| |||||||||||||||||||| ||||| ||| |||| ||| ||||||| Sbjct 2034 GAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTATGCAAGACAGAGGT 1975 Query 121 GAAAGGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAG--GA 178 |||| | ||||||||| || ||||| |||| |||||| |||||||| | | || Sbjct 1974 GAAATCCCCGGGCTCAACCTGGGAACTGCCTTTGTGACTGCATAGCTAGAGTACGGTAGA 1915 Query 179 GGGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGT 238 |||| | ||||||||| ||||||| ||||||||||||||||| ||||||||||| | Sbjct 1914 GGGGGA--TGGAATTCCGCGTGTAGCAGTGAAATGCGTAGATATGCGGAGGAACACCGAT 1857 Query 239 GGCGAAGGCGGCTTGCT-GGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAA 297 ||||||||| || || |||| |||||| || | || ||||||||||||||||||| Sbjct 1856 GGCGAAGGCAATCCCCTGGGCCTGT-ACTGACGCTCATGCACGAAAGCGTGGGGAGCAAA 1798 Query 298 CAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGG 352 ||||||||||||||||||||||||||||| ||||||||| ||| | ||| ||| Sbjct 1797 CAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGTCAACTGGTTGTTGGG 1743 >seq13716 Length=566 Score = 280 bits (310), Expect = 4e-73 Identities = 243/299 (81%), Gaps = 3/299 (1%) Strand=Plus/Minus Query 110 AAGTCAGAGGTGAAAGGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAG 169 ||||||| ||||||| | ||||||||||||| ||||| ||||||||| | | || | Sbjct 549 AAGTCAGGGGTGAAATCCCGGGGCTCAACCCCGGAACTGCCTTTGAAACTCCCAGTCTTG 490 Query 170 AGTGCAGGAGGGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGG 229 || | ||| || ||||||||||| ||||||| |||||||| |||||||||| ||||| Sbjct 489 AGGTCGAGAGAGGTGAGTGGAATTCCGAGTGTAGAGGTGAAATTCGTAGATATTCGGAGG 430 Query 230 AACACCAGTGGCGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGG 289 |||||||||||||||||||||| |||| | | |||||| |||||| ||||||||||| Sbjct 429 AACACCAGTGGCGAAGGCGGCTCACTGG-CCGATACTGACGCTGAGGTGCGAAAGCGTGG 371 Query 290 GGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTC 349 ||||||||||||||||||||||||||||||||||||| |||||||||||| | || ||| Sbjct 370 GGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGAATGCCAGACGTC 311 Query 350 GGGGCGCATAAGTGCTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 ||| |||| | | ||||| | || | |||| | |||| | || ||||||||||| Sbjct 310 GGGCAGCAT--GCTGTTCGGTGTCACACCTAACGGATTAAGCTTCCCGCCTGGGGAGTA 254 >seq5840 Length=1738 Score = 203 bits (224), Expect = 8e-50 Identities = 179/219 (82%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72 |||| |||||||||||||||||||||||||||||||||||||||| || ||||||| || Sbjct 1524 AAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC-AGCGTTAATCG 1582 Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132 |||||||||||||||||| ||||| ||| |||| |||| |||| |||||| | || Sbjct 1583 GAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTATGTAAGACAGATGTGAAATCCCCGGG 1642 Query 133 CTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAG--GAGGGGCAAGTGGA 190 || |||| || |||| |||| |||||| |||||||| | | |||||| | |||| Sbjct 1643 CT-AACCTGGGACCTGCATTTGTGACTGCATAGCTAGAGTACGGTAGAGGGGGA--TGGA 1699 Query 191 ATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGG 229 ||||| ||||||| ||||||||||||||||| ||||| Sbjct 1700 ATTCCGCGTGTAGCAGTGAAATGCGTAGATATGCGGAGG 1738 >seq47862 Length=579 Score = 136 bits (150), Expect = 1e-29 Identities = 93/105 (89%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 60 ||| ||| || |||| |||||||||||||||||||||||||||||||||||||||| || Sbjct 475 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 534 Query 61 TAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTT 105 ||||||| |||||||||||||||||||| ||||| ||| |||| Sbjct 535 GAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTT 579 >seq33506 Length=1068 Score = 118 bits (130), Expect = 3e-24 Identities = 73/78 (94%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72 ||||||||||||||| |||||||||||||||||||| ||| |||||||||||||| | || Sbjct 988 AAGCCCCGGCTAACTTCGTGCCAGCAGCCGCGGTAAGACGAAGGGGGCTAGCGTTGTTCG 1047 Query 73 GAATTACTGGGCGTAAAG 90 |||||||||||||||||| Sbjct 1048 GAATTACTGGGCGTAAAG 1065 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1202588666112