Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulomyxa_20filosa_20[genbank_20GCA_5F000512085.1_202013-12-30] 50,809 sequences; 101,867,045 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq13840 235 1e-59 seq46395 181 2e-43 >seq13840 Length=1178 Score = 235 bits (260), Expect = 1e-59 Identities = 209/259 (81%), Gaps = 2/259 (1%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131 ||||||||||||||||| ||| |||||||||| |||||||||||||||||||| Sbjct 281 CTTCTTAGAGGGACTATGTATGTAAGTGCATGGAAGTTTAAGGCAATAACAGGTCTGTGA 222 Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATC-A 190 ||||| |||| || ||||||||||||||||||||||||||| || |||| | || | Sbjct 221 TGCCCCTAGACGTCCTGGGCCGCACGCGCGCTACACTGACACGTTCAGCGAGCTTATTTA 162 Query 191 CCTTGGCCGGAAGGTCT-GGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATT 249 ||| ||| |||| | ||| |||||||||| |||||||||||||||||| | || Sbjct 161 CCTGTCCCGAAAGGGCACGGGAAATCTTGTTAGGACGTGTCGTGCTGGGGATAGATCTTT 102 Query 250 GCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGAT 309 |||||||| | |||| |||||||||| ||| |||||| | ||||||||| | | ||| Sbjct 101 GCAATTATAGATCTTGAACGAGGAATTCCTTGTAAGCACAGGTCATCAGCCTGTGCTGAA 42 Query 310 TACGTCCCTGCCCTTTGTA 328 ||||||||||||||||||| Sbjct 41 TACGTCCCTGCCCTTTGTA 23 >seq46395 Length=3700 Score = 181 bits (200), Expect = 2e-43 Identities = 239/331 (72%), Gaps = 24/331 (7%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGC-----GGGTCGCCGGCTT 74 || |||||||| | |||||||||||| || ||| || | | | | | ||| Sbjct 719 GAACGAGACCTCAGCCTGCTAAATAGTT--GCTCGCCTTTTCTATAAGACTTGACAACTT 776 Query 75 CTTAGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGC 134 |||||||||||| | | ||| | | |||||||||||||||||||||||||||||||| Sbjct 777 CTTAGAGGGACTTTGTGTGCAACCACAAGGAAGTTTGAGGCAATAACAGGTCTGTGATGC 836 Query 135 CCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGA------------ 182 |||||||||| |||||||||||||| |||||||||| | |||||| Sbjct 837 CCTTAGATGTCCTGGGCCGCACGCGTGCTACACTGATACGTACAACGAGGTATATGTACT 896 Query 183 -GTTCATCA--CCTTGGCCGGA--AGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGG 237 || ||||| || ||| | || | ||||||| | || | |||||||| Sbjct 897 TGTACATCAATGCTGCTCCGAAATAGACGAGCTTAATCTTATAAATACGTATCGTGCTGC 956 Query 238 GGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCA 297 ||||||| | ||| |||||| |||| || | ||||| |||||||||||| |||| | Sbjct 957 GGATAGATCGTTGAAATTATGAATCTTGAAGGTGGAATTCCTAGTAAGCGCACGTCACTA 1016 Query 298 GCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | ||||||||||||||||||||||||||| Sbjct 1017 ACGTGCGTTGATTACGTCCCTGCCCTTTGTA 1047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946718737152