Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulomyxa_20filosa_20[genbank_20GCA_5F000512085.1_202013-12-30] 50,809 sequences; 101,867,045 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq38752 271 1e-70 seq5550 260 3e-67 seq25966 253 4e-65 seq20132 253 4e-65 seq22555 194 3e-47 seq48268 185 2e-44 seq2809 159 6e-37 seq30679 120 6e-25 seq30149 118 2e-24 seq21152 111 3e-22 seq42319 104 4e-20 >seq38752 Length=1498 Score = 271 bits (300), Expect = 1e-70 Identities = 253/320 (79%), Gaps = 1/320 (0%) Strand=Plus/Minus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 |||||| |||||||||||||||||||||||||||| ||||||||| |||| ||||||| Sbjct 485 AGTGCATGTGGTGGATGCCTTGGCGATTACAGGCGAAGAAGGACGTGATAGCCTGCGATA 426 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 |||| ||||||| ||||| |||||||||| |||||||||||||||||||||| | Sbjct 425 AGCTTCGGGGAGCTGGCAAATTAGCTTTGATCCGGAGATTTCCGAATGGGGAAACCCACC 366 Query 121 CCTTTGG-GTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAA 179 | | | | |||||||||||||||||| |||| |||||| || ||||||||| Sbjct 365 TCGCAAGAGGTAACGCATGCTGAATACATAGGCATGCGTGGCGAACCGGGTGAACTGAAA 306 Query 180 CATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAA 239 ||||| ||||||| ||||||||| ||||||||||||||| ||||||||||||||||||| Sbjct 305 CATCTCAGTAGCTCGAGGAAAAGACATCAACCGAGATTCCGAAAGTAGTGGCGAGCGAAA 246 Query 240 TGGGATGAGCCTTTACGAGATAGTTGAATTGATAGTGGAATCCTCTGGAAATAGGAGCCA 299 | ||| |||| | || ||| | | ||| ||| |||||| |||| Sbjct 245 TCGGAGTAGCCCTCGCGTTTTAGCAGTTTGCATATCAGAACGGAATGGAAAGTCCGGCCA 186 Query 300 TAGCGGGTGATAGCCCCGTA 319 |||||||||||||||||||| Sbjct 185 TAGCGGGTGATAGCCCCGTA 166 >seq5550 Length=2568 Score = 260 bits (288), Expect = 3e-67 Identities = 209/251 (83%), Gaps = 1/251 (0%) Strand=Plus/Minus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 |||||| |||||||||||||||||||||||||||| ||||||||| |||| ||||||| Sbjct 324 AGTGCATGTGGTGGATGCCTTGGCGATTACAGGCGAAGAAGGACGTGATAGCCTGCGATA 265 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 |||| ||||||| ||||| |||||||||| |||||||||||||||||||||| | Sbjct 264 AGCTTCGGGGAGCTGGCAAATTAGCTTTGATCCGGAGATTTCCGAATGGGGAAACCCACC 205 Query 121 CCTTTGG-GTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAA 179 | | | | |||||||||||||||||| |||| |||||| || ||||||||| Sbjct 204 TCGCAAGAGGTAACGCATGCTGAATACATAGGCATGCGTGGCGAACCGGGTGAACTGAAA 145 Query 180 CATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAA 239 ||||| ||||||| ||||||||| ||||||||||||||| ||||||||||||||||||| Sbjct 144 CATCTCAGTAGCTCGAGGAAAAGACATCAACCGAGATTCCGAAAGTAGTGGCGAGCGAAA 85 Query 240 TGGGATGAGCC 250 | ||| |||| Sbjct 84 TCGGAGTAGCC 74 >seq25966 Length=3938 Score = 253 bits (280), Expect = 4e-65 Identities = 252/321 (79%), Gaps = 4/321 (1%) Strand=Plus/Plus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 |||||| ||||||||||||||||||| |||||||||||||||||| ||| ||||| | Sbjct 2323 AGTGCATCTGGTGGATGCCTTGGCGATCACAGGCGATGAAGGACGTGCAAGCCTGCGAAA 2382 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 ||| |||||||| |||| ||||||||||| ||| ||||||||||||||||| | Sbjct 2383 AGCAGCGGGGAGCTGGCAATGGAGCTTTGATCCGCTGATGTCCGAATGGGGAAACCCCTC 2442 Query 121 CCTTTGGGTCATTGCATGCTGAATACATAGGTATGCAAAG-CGAACGCGGCGAACTGAAA 179 | || || | |||||| ||||||| | || ||||| || ||||||||| Sbjct 2443 CGCAAGGAG-ATCCCTGGCTGAACACATAGGCCAGTGGAGGCGAACCGGGAGAACTGAAA 2501 Query 180 CATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAA 239 |||||||||| | ||||||||||||||||||||||||| ||||||||||||||||| Sbjct 2502 CATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCGTAAGTAGTGGCGAGCGAAC 2561 Query 240 TGGGATGAGCCTTTACGAGATAGTTGAAT-TGATAGTGGAATCCTCTGGAAATAGGAGCC 298 ||| |||||| || | | || | || | || |||||||| ||||||||| | ||| Sbjct 2562 GCGGAAGAGCCTGTATGTGTTA-TGGATTGTGTTAGTGGAACGCTCTGGAAAGTGCGGCC 2620 Query 299 ATAGCGGGTGATAGCCCCGTA 319 |||| |||||||||||||||| Sbjct 2621 ATAGTGGGTGATAGCCCCGTA 2641 >seq20132 Length=1115 Score = 253 bits (280), Expect = 4e-65 Identities = 252/321 (79%), Gaps = 4/321 (1%) Strand=Plus/Plus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 |||||| ||||||||||||||||||| |||||||||||||||||| ||| ||||| | Sbjct 695 AGTGCATCTGGTGGATGCCTTGGCGATCACAGGCGATGAAGGACGTGCAAGCCTGCGAAA 754 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 ||| |||||||| |||| ||||||||||| ||| ||||||||||||||||| | Sbjct 755 AGCAGCGGGGAGCTGGCAATGGAGCTTTGATCCGCTGATGTCCGAATGGGGAAACCCCTC 814 Query 121 CCTTTGGGTCATTGCATGCTGAATACATAGGTATGCAAAG-CGAACGCGGCGAACTGAAA 179 | || || | |||||| ||||||| | || ||||| || ||||||||| Sbjct 815 CGCAAGGAG-ATCCCTGGCTGAACACATAGGCCAGTGGAGGCGAACCGGGAGAACTGAAA 873 Query 180 CATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAA 239 |||||||||| | ||||||||||||||||||||||||| ||||||||||||||||| Sbjct 874 CATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCGTAAGTAGTGGCGAGCGAAC 933 Query 240 TGGGATGAGCCTTTACGAGATAGTTGAAT-TGATAGTGGAATCCTCTGGAAATAGGAGCC 298 ||| |||||| || | | || | || | || |||||||| ||||||||| | ||| Sbjct 934 GCGGAAGAGCCTGTATGTGTTA-TGGATTGTGTTAGTGGAACGCTCTGGAAAGTGCGGCC 992 Query 299 ATAGCGGGTGATAGCCCCGTA 319 |||| |||||||||||||||| Sbjct 993 ATAGTGGGTGATAGCCCCGTA 1013 >seq22555 Length=2992 Score = 194 bits (214), Expect = 3e-47 Identities = 238/318 (75%), Gaps = 9/318 (3%) Strand=Plus/Minus Query 6 ACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTG 65 ||| ||||||||||||||| | | ||||||||||||||||| || | ||||| ||| || Sbjct 2596 ACACGGTGGATGCCTTGGCAGTCAGAGGCGATGAAGGACGTACTAACCTGCGAAAAGTTG 2537 Query 66 CGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTT 125 || ||| | || | | |||| || || || ||||||||||||||||| | || Sbjct 2536 TGGTGAGCTGGTAAGAAG-CATTGACCCACAAATGTCCGAATGGGGAAACCCACCTGATT 2478 Query 126 GGGTCA--TTGCATG--CTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAACA 181 ||| | | | |||||||||||||| | |||||| || ||||||||||| Sbjct 2477 TA-TCAGGTATCTTTAACTGAATACATAGGTTAAAGAGGCGAACCGGGAGAACTGAAACA 2419 Query 182 TCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATG 241 |||||||| | |||||||||||||||||||||| ||| ||||| |||||||||| | Sbjct 2418 TCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATCCCCTTAGTAGCGGCGAGCGAACGG 2359 Query 242 GGATGAGCCTTTACGAGATAGTTGAATTGATAGTGGAATCCTCTGGAAATAGGAGCCATA 301 || |||| ||| || | || || | |||||||||| |||||||| |||| ||| Sbjct 2358 GGGCCAGCCCTTA--AGTTTATT-AAGAGTTAGTGGAATCATCTGGAAAGCTGAGCGATA 2302 Query 302 GCGGGTGATAGCCCCGTA 319 |||||||||||||||| Sbjct 2301 CAGGGTGATAGCCCCGTA 2284 >seq48268 Length=944 Score = 185 bits (204), Expect = 2e-44 Identities = 230/310 (74%), Gaps = 24/310 (8%) Strand=Plus/Minus Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69 |||||||||||||||| | |||||||||||||||| ||| ||||||||||| |||| Sbjct 289 GGTGGATGCCTTGGCGTCGAGAGGCGATGAAGGACGTGGTACGCTGCGATAAGCTACGGG 230 Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCC-TTTGGG 128 ||| || |||| |||||||||| ||||||||||||||||||||||||||| ||| Sbjct 229 GAG-CTGCGAACAAGCTTTGATCCGTAGATTTCCGAATGGGGAAACCCGGCCCGCAAGGG 171 Query 129 TCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAACATCTAAGT 188 |||| | | | | |||||||| ||| ||| |||||||||| ||| Sbjct 170 TCATCCC---------------GCAAGGGAAGCGAACCCGGGGAAGTGAAACATCTCAGT 126 Query 189 AGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGA-TGA 247 | | | |||||| || |||||| |||| ||| |||||||||||||||| ||| | Sbjct 125 ACCCGGAGGAAAGGACATCAACAGAGACTCCGCTAGTAGTGGCGAGCGAACGCGGACTAG 66 Query 248 GCCTTTAC-GAGATAGTTGAATTGATAGTGGAATCCTCTGGAAATAGGAGCCATAGCGGG 306 ||| | | ||| || || || | |||| ||||||||| || ||||||||||| Sbjct 65 GCCAGTGCTTCGATTGT--AA--GA-ACCGGAACACTCTGGAAAGAGTGGCCATAGCGGG 11 Query 307 TGATAGCCCC 316 |||||||||| Sbjct 10 TGATAGCCCC 1 >seq2809 Length=5502 Score = 159 bits (176), Expect = 6e-37 Identities = 186/245 (76%), Gaps = 12/245 (5%) Strand=Plus/Plus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || ||| ||||||||||||||||| |||||||||| ||||| ||| ||||||| Sbjct 1153 AGAGCATTTGGTGGATGCCTTGGCGGCAGGAGGCGATGAAAGACGTGATAGGCTGCGATA 1212 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCC--- 117 |||| |||||| | || || | ||||||||| |||| || |||||||||||||| Sbjct 1213 AGCTACGGGGAA-GTGCCAATAACTTTTGATCCGTAGATCTCTGAATGGGGAAACCCACT 1271 Query 118 GGCCCTTT---GGGTCATTGCATGCTGAATACATAGGTATGCA-AAGCGAACGCGGCGAA 173 || | | | || ||| |||||||||||||| || | |||||||| | | ||| Sbjct 1272 GGATTTATCCAGTATCTTTGA---CTGAATACATAGGT-TGAAGAAGCGAACCCAGGGAA 1327 Query 174 CTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGA 233 |||||| ||||||||| ||| |||||| |||||||| ||||| || ||||||| ||| Sbjct 1328 CTGAAATATCTAAGTACCTGGAGGAAAGGAAATCAAACGAGACTCTGCTAGTAGTGACGA 1387 Query 234 GCGAA 238 ||||| Sbjct 1388 GCGAA 1392 >seq30679 Length=502 Score = 120 bits (132), Expect = 6e-25 Identities = 168/227 (74%), Gaps = 8/227 (4%) Strand=Plus/Plus Query 6 ACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTG 65 ||| ||||||||||| ||| | | |||||||||||||||| || | |||| |||| || Sbjct 277 ACACGGTGGATGCCTAGGCAGTCAGAGGCGATGAAGGACGTGCTAACCTGCGTTAAG-TG 335 Query 66 CGGG-GAGTGAGCAAACACACTTTGAT-CCGCAGATTTCCGAATGGGGAAACCCG--GCC 121 || ||| | || | | |||| || || || ||||||||||||||||| || Sbjct 336 TGGTCGAGCTGGTAAGAAG-CATTGACACCACA-ATGTCCGAATGGGGAAACCCACTGCA 393 Query 122 CTT-TGGGTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAAC 180 || || || ||| ||||||||||| ||| | |||||| || ||| |||||| Sbjct 394 TTTATGCAGTATCGCAACATGAATACATAGTGTTGCGAGGCGAACCGGGAGAAGTGAAAC 453 Query 181 ATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAG 227 |||| |||| | |||||||||||||||||||||||||| ||||| Sbjct 454 ATCTCAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCTCAGTAG 500 >seq30149 Length=517 Score = 118 bits (130), Expect = 2e-24 Identities = 126/162 (78%), Gaps = 6/162 (4%) Strand=Plus/Plus Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69 |||||||||||||||| | | |||||||||||||||| ||| ||||||||| ||| Sbjct 359 GGTGGATGCCTTGGCGCTAAGAGGCGATGAAGGACGTGGTACGCTGCGATAAGTCATGGG 418 Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGGGT 129 ||| || |||| |||||||||| |||||||||||||||||||| || |||| Sbjct 419 GAG-CCGCGAACAGGCTTTGATCCGTGAATTTCCGAATGGGGAAACCCACCCGCAAGGGT 477 Query 130 CAT--TGCATGCTGAATACATAGGTATGCAAAGCGAACGCGG 169 || |||| |||||||||||||| | | | |||||| ||| Sbjct 478 -ATCGTGCA--CTGAATACATAGGTGTACGAGGCGAACCCGG 516 >seq21152 Length=2898 Score = 111 bits (122), Expect = 3e-22 Identities = 138/183 (75%), Gaps = 7/183 (4%) Strand=Plus/Minus Query 139 CTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCAGGA 198 |||||| ||||||| | | || ||| | | |||||||||||||| |||| ||| |||| Sbjct 2874 CTGAATCCATAGGTCAACGAGGCAAACCCAGGGAACTGAAACATCTCAGTACCTGGAGGA 2815 Query 199 AAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGA-TGAGCCTTTAC-G 256 || || |||||| |||| ||| |||||||||||||||| ||| | ||| | | Sbjct 2814 AAGGACATCAACAGAGACTCCGCTAGTAGTGGCGAGCGAACGCGGACTAGGCCAGTGCTT 2755 Query 257 AGATAGTTGAATTGATAGTGGAATCCTCTGGAAATAGGAGCCATAGCGGGTGATAGCCCC 316 ||| || || || | |||| ||||||||| || ||||||||||||||||||||| Sbjct 2754 CGATTGT--AA--GA-ACCGGAACACTCTGGAAAGAGTGGCCATAGCGGGTGATAGCCCC 2700 Query 317 GTA 319 ||| Sbjct 2699 GTA 2697 >seq42319 Length=3671 Score = 104 bits (114), Expect = 4e-20 Identities = 134/182 (74%), Gaps = 10/182 (5%) Strand=Plus/Plus Query 139 CTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCAGG 197 ||||||||||||| | || ||||||| ||| ||||||||||||||||||| | | ||| Sbjct 2254 CTGAATACATAGGGGTTTAAGAGCGAACCCGGGGAACTGAAACATCTAAGTACCCGGAGG 2313 Query 198 AAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAGCCTTTACGA 257 ||| |||||||| |||| ||| |||||||||||||||| ||| ||| ||| Sbjct 2314 AAAGGAAATCAAGAGAGACTCCGCTAGTAGTGGCGAGCGAACGCGGACCAGC-----CGA 2368 Query 258 GATAGTTGAATTGATAGTGGAATCCTCTGGAAATAGGAGCCATAGCGGGTGATAGCCCCG 317 | || | | |||||||| |||||||| ||| | | |||||| ||||||| Sbjct 2369 G---CCTGGAGAGTGAGTGGAATGGTCTGGAAAGGCCAGCGAGA-TGGGTGACAGCCCCG 2424 Query 318 TA 319 || Sbjct 2425 TA 2426 Score = 77.0 bits (84), Expect = 6e-12 Identities = 83/109 (76%), Gaps = 1/109 (1%) Strand=Plus/Plus Query 9 TGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGG 68 |||||||||||| ||| | | |||||||||||||||| || | |||| ||||| || Sbjct 2080 TGGTGGATGCCTAGGCAGTAAGAGGCGATGAAGGACGTGATACCCTGCGTTAAGCCATGG 2139 Query 69 GGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCC 117 |||| | || | ||||||||| ||| ||||||||||| ||||| Sbjct 2140 GGAG-CCGGGAATAGGCTTTGATCCATGGATGTCCGAATGGGGGAACCC 2187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 917933370144