Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulomyxa_20filosa_20[genbank_20GCA_5F000512085.1_202013-12-30] 50,809 sequences; 101,867,045 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq42457 111 3e-22 seq46396 77.0 5e-12 >seq42457 Length=2349 Score = 111 bits (122), Expect = 3e-22 Identities = 97/118 (82%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | || |||| |||||||| | ||| | |||| || ||| Sbjct 1092 GTACGAGAGGAACCGTTGGAT-CAGA-TAATTGGTAAATACGGTTAGCTGAAAAGCTAGT 1149 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 |||| |||||||||||||| |||||||| |||||||||||||||||||||||| ||| Sbjct 1150 GCCGTGAAGCTACCATCTGTAGGATTATGACTGAACGCCTCTAAGTCAGAATCCTTGC 1207 >seq46396 Length=793 Score = 77.0 bits (84), Expect = 5e-12 Identities = 99/130 (76%), Gaps = 5/130 (4%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | ||||| || |||||| | ||| ||||||| |||||||| Sbjct 192 GTACGAGAGGAACAGTTGG-TTCAGG-TATTTGGTTAATACGGTTGTCTGAACAGGCAGT 249 Query 61 GCCGCGAAG-CTACCATCTG-CTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 |||| |||| ||| | ||| | |||||||||| ||||| ||| |||||| |||| Sbjct 250 GCCGTGAAGACTAGAACCTGTACAAAGTATGGCTGAAAGCCTCAAAGCCAGAATTCATG- 308 Query 119 CAGAACGGGG 128 | ||| |||| Sbjct 309 CTGAAAGGGG 318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 818796779776