Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulomyxa_20filosa_20[genbank_20GCA_5F000512085.1_202013-12-30] 50,809 sequences; 101,867,045 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq24000 95.1 5e-14 >seq24000 Length=1134 Score = 95.1 bits (104), Expect = 5e-14 Identities = 125/169 (74%), Gaps = 6/169 (4%) Strand=Plus/Minus Query 449018 GGGTAGGCATGCGGGTTCATGATGATGTCGGGCGTCTCGCC--GGCCGCGTTGAAGGGCA 449075 ||| || |||| || ||||||| | ||||| | |||| || ||| |||| |||| Sbjct 988 GGGAAGCCATGGGGATTCATGACCAGATCGGGATACACGCCTTGGTCGC--TGAACGGCA 931 Query 449076 TGTCCTCGGGGTTGACCACCAGGCCGTTGACGCCCTTCTGGCCGTGGCGGCTGCAGAACT 449135 | ||||| ||||||| | || ||| ||||||||||| || || || |||| ||||| Sbjct 930 TATCCTCTTGGTTGACAATGAGTCCGCACACGCCCTTCTGTCCATGTCGACTGCTGAACT 871 Query 449136 TGTCCCCCTGCTCGGGCTTGCG-TGTGAAGCGCAGCACGATCTTGATGG 449183 |||| ||| ||||||| |||| ||| |||||||| || ||||| || Sbjct 870 TGTCGCCCAGCTCGGGAATGCGATGT-TCGCGCAGCAGGACCTTGACGG 823 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2083348953878582