Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizaria_20sp._20SCN_2062-66_20[genbank_20GCA_5F001724265.1_202016- 09-13] 714 sequences; 34,916,453 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq706 147 7e-33 >seq706 Length=19346 Score = 147 bits (162), Expect = 7e-33 Identities = 104/117 (89%), Gaps = 3/117 (3%) Strand=Plus/Minus Query 298 AGGGTCTTCTTTCCCCGCTG--ATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTA 355 |||||||||||||||||||| | | | |||||||||||||||||||||||| ||||||| Sbjct 15334 AGGGTCTTCTTTCCCCGCTGTCAATGC-CCAAGCCCGTTCCCTTGGCTGTGGGTTCGCTA 15276 Query 356 GATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTA 412 || ||| |||||||||| ||||||||||| ||||||||||||||||||| ||||| Sbjct 15275 GAACGTAAGTAGGGACAGTAGGAATCTCGTTGATCCATTCATGCGCGTCACAAATTA 15219 Score = 116 bits (128), Expect = 1e-23 Identities = 78/86 (91%), Gaps = 1/86 (1%) Strand=Plus/Minus Query 437 AAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGAC 496 ||||||||||||||||||||||||||| ||||| ||||| | |||| ||||||| || || Sbjct 13790 AAGAGAGTCATAGTTACTCCCGCCGTTGACCCGTGCTTGTTCGAATCTCTTCACCTTAAC 13731 Query 497 ATTCAGAGCACTGGGCAGAAATCACA 522 |||||| ||||||||||||||||||| Sbjct 13730 ATTCAG-GCACTGGGCAGAAATCACA 13706 Score = 93.3 bits (102), Expect = 1e-16 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 46 CCTTAGGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCT 104 |||| | ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 16035 CCTTTGTACACCTGCGTTATCGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCT 15977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635188324672