Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salpingoeca_20rosetta_20[genbank_20GCA_5F000188695.1_202011-02-10] 154 sequences; 55,440,309 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq7 306 6e-81 seq28 161 2e-37 >seq7 Length=2024178 Score = 306 bits (338), Expect = 6e-81 Identities = 192/207 (93%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| Sbjct 2022646 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAACTCACGTTCCCTA 2022587 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||||||||||||| ||| |||||||||||| ||||||||||||| ||| Sbjct 2022586 TTAGTGGGTGAACAATCCAACACTTGGTGAATTCTGCTTCACAATGATAGGAAGAGTCGA 2022527 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2022526 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 2022467 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAG 237 | ||||||||||| | ||||||||| Sbjct 2022466 CGCCGGTAACTTTTCGGACACCTCTAG 2022440 >seq28 Length=911200 Score = 161 bits (178), Expect = 2e-37 Identities = 98/104 (94%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 134 ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTG 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1490 ATGATAGGAAGAGTCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTG 1549 Query 194 CCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAG 237 |||||||||||||||||| ||||||||||| | ||||||||| Sbjct 1550 CCACAAGCCAGTTATCCCGCCGGTAACTTTTCGGACACCTCTAG 1593 Score = 125 bits (138), Expect = 1e-26 Identities = 72/74 (97%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| Sbjct 1310 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAACTCACGTTCCCTA 1369 Query 91 TTAGTGGGTGAACA 104 |||||||||||||| Sbjct 1370 TTAGTGGGTGAACA 1383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854398684224