Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salpingoeca_20rosetta_20[genbank_20GCA_5F000188695.1_202011-02-10] 154 sequences; 55,440,309 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq43 75.2 1e-11 seq41 75.2 1e-11 seq37 75.2 1e-11 seq34 75.2 1e-11 seq30 75.2 1e-11 seq28 75.2 1e-11 seq23 75.2 1e-11 seq22 75.2 1e-11 seq18 75.2 1e-11 seq12 75.2 1e-11 seq8 75.2 1e-11 seq2 75.2 1e-11 >seq43 Length=321062 Score = 75.2 bits (82), Expect = 1e-11 Identities = 66/84 (79%), Gaps = 9/84 (11%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC---------CTTTGCTCGAATACAT 63 ||||||||||||||||||||| ||||||||||||| |||||| ||||| || Sbjct 4853 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCAGTCATTTGATTTGCTTGAATAGAT 4794 Query 64 TACCATGGAATAATAGAATAGGAC 87 || ||||||| || ||| ||||| Sbjct 4793 TAGCATGGAACAACGGAAGAGGAC 4770 >seq41 Length=387629 Score = 75.2 bits (82), Expect = 1e-11 Identities = 66/84 (79%), Gaps = 9/84 (11%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC---------CTTTGCTCGAATACAT 63 ||||||||||||||||||||| ||||||||||||| |||||| ||||| || Sbjct 383718 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCAGTCATTTGATTTGCTTGAATAGAT 383777 Query 64 TACCATGGAATAATAGAATAGGAC 87 || ||||||| || ||| ||||| Sbjct 383778 TAGCATGGAACAACGGAAGAGGAC 383801 >seq37 Length=724622 Score = 75.2 bits (82), Expect = 1e-11 Identities = 66/84 (79%), Gaps = 9/84 (11%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC---------CTTTGCTCGAATACAT 63 ||||||||||||||||||||| ||||||||||||| |||||| ||||| || Sbjct 3119 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCAGTCATTTGATTTGCTTGAATAGAT 3060 Query 64 TACCATGGAATAATAGAATAGGAC 87 || ||||||| || ||| ||||| Sbjct 3059 TAGCATGGAACAACGGAAGAGGAC 3036 Score = 75.2 bits (82), Expect = 1e-11 Identities = 66/84 (79%), Gaps = 9/84 (11%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC---------CTTTGCTCGAATACAT 63 ||||||||||||||||||||| ||||||||||||| |||||| ||||| || Sbjct 719002 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCAGTCATTTGATTTGCTTGAATAGAT 719061 Query 64 TACCATGGAATAATAGAATAGGAC 87 || ||||||| || ||| ||||| Sbjct 719062 TAGCATGGAACAACGGAAGAGGAC 719085 >seq34 Length=738859 Score = 75.2 bits (82), Expect = 1e-11 Identities = 66/84 (79%), Gaps = 9/84 (11%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC---------CTTTGCTCGAATACAT 63 ||||||||||||||||||||| ||||||||||||| |||||| ||||| || Sbjct 5981 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCAGTCATTTGATTTGCTTGAATAGAT 5922 Query 64 TACCATGGAATAATAGAATAGGAC 87 || ||||||| || ||| ||||| Sbjct 5921 TAGCATGGAACAACGGAAGAGGAC 5898 >seq30 Length=789273 Score = 75.2 bits (82), Expect = 1e-11 Identities = 66/84 (79%), Gaps = 9/84 (11%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC---------CTTTGCTCGAATACAT 63 ||||||||||||||||||||| ||||||||||||| |||||| ||||| || Sbjct 5367 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCAGTCATTTGATTTGCTTGAATAGAT 5308 Query 64 TACCATGGAATAATAGAATAGGAC 87 || ||||||| || ||| ||||| Sbjct 5307 TAGCATGGAACAACGGAAGAGGAC 5284 >seq28 Length=911200 Score = 75.2 bits (82), Expect = 1e-11 Identities = 66/84 (79%), Gaps = 9/84 (11%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC---------CTTTGCTCGAATACAT 63 ||||||||||||||||||||| ||||||||||||| |||||| ||||| || Sbjct 8173 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCAGTCATTTGATTTGCTTGAATAGAT 8114 Query 64 TACCATGGAATAATAGAATAGGAC 87 || ||||||| || ||| ||||| Sbjct 8113 TAGCATGGAACAACGGAAGAGGAC 8090 >seq23 Length=1191819 Score = 75.2 bits (82), Expect = 1e-11 Identities = 66/84 (79%), Gaps = 9/84 (11%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC---------CTTTGCTCGAATACAT 63 ||||||||||||||||||||| ||||||||||||| |||||| ||||| || Sbjct 6600 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCAGTCATTTGATTTGCTTGAATAGAT 6541 Query 64 TACCATGGAATAATAGAATAGGAC 87 || ||||||| || ||| ||||| Sbjct 6540 TAGCATGGAACAACGGAAGAGGAC 6517 >seq22 Length=1285527 Score = 75.2 bits (82), Expect = 1e-11 Identities = 66/84 (79%), Gaps = 9/84 (11%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC---------CTTTGCTCGAATACAT 63 ||||||||||||||||||||| ||||||||||||| |||||| ||||| || Sbjct 1778 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCAGTCATTTGATTTGCTTGAATAGAT 1719 Query 64 TACCATGGAATAATAGAATAGGAC 87 || ||||||| || ||| ||||| Sbjct 1718 TAGCATGGAACAACGGAAGAGGAC 1695 >seq18 Length=1385450 Score = 75.2 bits (82), Expect = 1e-11 Identities = 66/84 (79%), Gaps = 9/84 (11%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC---------CTTTGCTCGAATACAT 63 ||||||||||||||||||||| ||||||||||||| |||||| ||||| || Sbjct 1384551 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCAGTCATTTGATTTGCTTGAATAGAT 1384610 Query 64 TACCATGGAATAATAGAATAGGAC 87 || ||||||| || ||| ||||| Sbjct 1384611 TAGCATGGAACAACGGAAGAGGAC 1384634 >seq12 Length=1669363 Score = 75.2 bits (82), Expect = 1e-11 Identities = 66/84 (79%), Gaps = 9/84 (11%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC---------CTTTGCTCGAATACAT 63 ||||||||||||||||||||| ||||||||||||| |||||| ||||| || Sbjct 7272 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCAGTCATTTGATTTGCTTGAATAGAT 7213 Query 64 TACCATGGAATAATAGAATAGGAC 87 || ||||||| || ||| ||||| Sbjct 7212 TAGCATGGAACAACGGAAGAGGAC 7189 >seq8 Length=1951132 Score = 75.2 bits (82), Expect = 1e-11 Identities = 66/84 (79%), Gaps = 9/84 (11%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC---------CTTTGCTCGAATACAT 63 ||||||||||||||||||||| ||||||||||||| |||||| ||||| || Sbjct 1915610 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCAGTCATTTGATTTGCTTGAATAGAT 1915669 Query 64 TACCATGGAATAATAGAATAGGAC 87 || ||||||| || ||| ||||| Sbjct 1915670 TAGCATGGAACAACGGAAGAGGAC 1915693 >seq2 Length=2479747 Score = 75.2 bits (82), Expect = 1e-11 Identities = 66/84 (79%), Gaps = 9/84 (11%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC---------CTTTGCTCGAATACAT 63 ||||||||||||||||||||| ||||||||||||| |||||| ||||| || Sbjct 2461910 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCAGTCATTTGATTTGCTTGAATAGAT 2461969 Query 64 TACCATGGAATAATAGAATAGGAC 87 || ||||||| || ||| ||||| Sbjct 2461970 TAGCATGGAACAACGGAAGAGGAC 2461993 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511999236160