Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salpingoeca_20rosetta_20[genbank_20GCA_5F000188695.1_202011-02-10] 154 sequences; 55,440,309 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq28 118 2e-24 seq7 118 2e-24 >seq28 Length=911200 Score = 118 bits (130), Expect = 2e-24 Identities = 101/122 (83%), Gaps = 2/122 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || ||| || || |||||| ||||| || |||| || ||| Sbjct 1270 GTACGAGAGGAACCGTTGA-TTCGGA-TAGTTGGTTCATGCGGTTGGCTGAGGAGCCAGG 1213 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| |||| |||| | |||||||| |||||||||||||||||||||||||||| | Sbjct 1212 GCCGCGACGCTATCATCCGTAGGATTATGACTGAACGCCTCTAAGTCAGAATCCATGCTA 1153 Query 121 GA 122 || Sbjct 1152 GA 1151 >seq7 Length=2024178 Score = 118 bits (130), Expect = 2e-24 Identities = 101/122 (83%), Gaps = 2/122 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || ||| || || |||||| ||||| || |||| || ||| Sbjct 2022686 GTACGAGAGGAACCGTTGA-TTCGGA-TAGTTGGTTCATGCGGTTGGCTGAGGAGCCAGG 2022743 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| |||| |||| | |||||||| |||||||||||||||||||||||||||| | Sbjct 2022744 GCCGCGACGCTATCATCCGTAGGATTATGACTGAACGCCTCTAAGTCAGAATCCATGCTA 2022803 Query 121 GA 122 || Sbjct 2022804 GA 2022805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819198777856