Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salpingoeca_20rosetta_20[genbank_20GCA_5F000188695.1_202011-02-10] 154 sequences; 55,440,309 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq22 100 1e-15 seq17 100 1e-15 >seq22 Length=1285527 Score = 100 bits (110), Expect = 1e-15 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 349074 CGTCGAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGG 349133 ||| || ||||||||||| | |||| ||| || || ||||||||||| | | |||| Sbjct 841237 CGTTGATGATCTCCTTGAGGCGCGGCACGCCGAGCGTGACGTTCTTGGCGGAGTAACCGG 841296 Query 349134 CAAAGTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGA 349193 | |||||| || | ||| |||| ||||||| |||||||||| ||||||| |||| | Sbjct 841297 CCTGGTGGAACGTGTTGAGCGTCATCTGCGTGGTTGGCTCGCCGAGGCACTGGGCCGCCA 841356 Query 349194 GGATGCCTACCATCTCGCCGGGC 349216 | ||| |||||||| ||||| Sbjct 841357 GCGGGCCCACCATCTCCGCGGGC 841379 >seq17 Length=1373939 Score = 100 bits (110), Expect = 1e-15 Identities = 125/170 (74%), Gaps = 1/170 (1%) Strand=Plus/Minus Query 449005 GGTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTCGGGCGTCTCGCCGGCCGC 449064 |||||| |||||||| | | || || |||||||| |||||||| | | || | Sbjct 1243191 GGTCATACGCGACGGAAACCCGTGTGGATTCATGATCATGTCGGGACACACCCCCTGATC 1243132 Query 449065 GTTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGACGCCCTTCTGGCCGTGGCG 449124 |||||| ||||||||||| |||| || | || ||| ||||||||||| ||||| || Sbjct 1243131 GTTGAATGGCATGTCCTCCTGGTTCACAATGAGACCGCACACGCCCTTCTGCCCGTGACG 1243072 Query 449125 GCTGCAGAACTTGTCCCCCTGCTCGGGCTTGCGTGTGAAGCGCAGCACGA 449174 ||||| ||||||||| || |||| || | || || ||||| ||||| Sbjct 1243071 GCTGCTGAACTTGTCGCCAAGCTCAGGGATACGCGTACTGCGCA-CACGA 1243023 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084734986220892