Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeroforma_20sirkka_20[genbank_20GCA_5F001586965.1_202016-03-11] 44,485 sequences; 85,494,527 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq21507 372 5e-101 seq42574 214 3e-53 >seq21507 Length=1174 Score = 372 bits (412), Expect = 5e-101 Identities = 218/223 (98%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | Sbjct 221 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 164 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 163 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 104 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct 103 CCCGGACCTGTCGGCCAAGGCTATAAACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 44 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAA 223 ||||||||||||||||||||||||||||||||||||||||||| Sbjct 43 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAA 1 >seq42574 Length=6330 Score = 214 bits (236), Expect = 3e-53 Identities = 185/224 (83%), Gaps = 4/224 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||| ||||| ||||| | ||| | |||| ||||||||||||||| || Sbjct 4941 GTACAAAGGGCAGGAACGTAATCAACACATGCTGG-TGACATGCGCTTACTAGGAATATC 4883 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTC-AAAGATT 119 ||||||||| || | ||||||| ||||||||||| |||||| || |||| ||| ||| Sbjct 4882 -TCGTTGAAGGTGAATATTTGCAATCATCTATCCCCAGCACGATAAAGTTTCCAAAAATT 4824 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 || |||| ||| ||| | ||||||||||| | ||||||||||||||||||||| Sbjct 4823 ACATACACCTACCGGTGTAGGAAA-AGACTCGTTGACTTCATCAGTGTAGCGCGCGTGCG 4765 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAA 223 ||||||||||||||||||||| |||||||| |||||||||||| Sbjct 4764 ACCCAGAACATCTAAGGGCATCGCAGACCTGATATTGCCTCAAA 4721 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751675926775