Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeroforma_20sirkka_20[genbank_20GCA_5F001586965.1_202016-03-11] 44,485 sequences; 85,494,527 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq9285 134 8e-30 seq37577 93.3 2e-17 seq30927 80.6 1e-13 seq10251 71.6 8e-11 >seq9285 Length=617 Score = 134 bits (148), Expect = 8e-30 Identities = 100/117 (85%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| |||||||||| ||||| || |||||| || Sbjct 561 GAACCCAAAGACTTTGATTTCTCATAAGGTGCCGGCGGAGTCCTAAAAGCAACATCCGCC 502 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| |||||||| ||||| |||| |||||| |||||||||||||||||||||| Sbjct 501 GATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 445 >seq37577 Length=3276 Score = 93.3 bits (102), Expect = 2e-17 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 || ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct 3253 CCAATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGCATCTGATCGTCTTCGA 3195 >seq30927 Length=1990 Score = 80.6 bits (88), Expect = 1e-13 Identities = 90/118 (76%), Gaps = 3/118 (3%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| || || | | |||||| | |||| || Sbjct 1770 GAACCCAAAGACTTTGATTTCTCATATGG--CTAATGGAGTCATATCATTAACTGTCACC 1713 Query 61 GATCCCTAGTCG-GCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||| | | |||||||| ||| ||||||||||| |||||||||||||||||| Sbjct 1712 ACTCCCTAAATGCGTATAGTTTATGGTCAAGACTACGACAGTATCTGATCGTCTTCGA 1655 >seq10251 Length=648 Score = 71.6 bits (78), Expect = 8e-11 Identities = 63/79 (80%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||| ||||||||| |||||||| || |||||| | |||| | || Sbjct 79 GAACCCAAAAACTATGATTTCTCATAAGGTGCTGATGGAGTCATATAATTAACTGCCACC 20 Query 61 GATCCCTAGTCGGCATAGT 79 |||||||||||||||||| Sbjct 19 AATCCCTAGTCGGCATAGT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278283894150