Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeroforma_20sirkka_20[genbank_20GCA_5F001586965.1_202016-03-11] 44,485 sequences; 85,494,527 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq2803 378 1e-102 seq9285 233 4e-59 seq30637 118 2e-24 seq31795 93.3 8e-17 seq44078 89.7 9e-16 seq4775 87.8 3e-15 seq14100 77.0 6e-12 seq6733 73.4 7e-11 >seq2803 Length=450 Score = 378 bits (418), Expect = 1e-102 Identities = 238/256 (93%), Gaps = 1/256 (0%) Strand=Plus/Plus Query 63 GAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATAC 122 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 155 GAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATAT 214 Query 123 ATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCC 182 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | Sbjct 215 ATTAGCATGGAATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAGGACCATC 274 Query 183 GTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTT 242 ||||||||||||||||| |||||||| |||||||||| |||||||||||||||||||| Sbjct 275 GTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAGTTGTCAGAGGTGAAATTCTT 334 Query 243 GGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGT 302 ||||||| ||||||||||||||||||||||| || ||||||| |||||||||||||| Sbjct 335 GGATTTACTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTTTCATTAATCA-A 393 Query 303 GAACGAAAGTTAGGGG 318 |||||||||||||||| Sbjct 394 GAACGAAAGTTAGGGG 409 >seq9285 Length=617 Score = 233 bits (258), Expect = 4e-59 Identities = 203/248 (82%), Gaps = 3/248 (1%) Strand=Plus/Plus Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130 || |||||||||| ||||||||||| |||||||| |||| |||| | |||||||||||| Sbjct 198 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGGATACATTAGCAT 257 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 || |||| | |||||| | |||| ||||| ||||| | ||| || |||||||| Sbjct 258 GGGATAACATTATAGGATTT-CGGTCCTATTACGTTGGCCTTCGGGATCGGAGTAATGAT 316 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||| ||||| ||||||||| | ||||| || |||||||||||||||||||||||||| Sbjct 317 TAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 376 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310 ||||| ||| ||||||||||| || |||||||||||||||||||||| |||||||| Sbjct 377 GAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAA 435 Query 311 GTTAGGGG 318 ||| |||| Sbjct 436 GTTGGGGG 443 >seq30637 Length=1952 Score = 118 bits (130), Expect = 2e-24 Identities = 106/131 (81%), Gaps = 3/131 (2%) Strand=Plus/Minus Query 126 AGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTA 185 ||||||||||||| |||||||| || | |||||| ||||||||||||| || ||| Sbjct 1943 AGCATGGAATAATGGAATAGGATCA-CGATCTTATTTTTTTGGTTTCTAGGATCGAGGTA 1885 Query 186 ATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA 245 |||||||||||||||||| ||| | |||| ||| |||||||||||||||||| || Sbjct 1884 ATGATTAATAGGGATAGT--TGGGAACTAATATTTAATCGTCAGAGGTGAAATTCTTAGA 1827 Query 246 TTTATTGAAGA 256 ||||| |||| Sbjct 1826 TTTATGAAAGA 1816 >seq31795 Length=2099 Score = 93.3 bits (102), Expect = 8e-17 Identities = 69/81 (85%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 158 TATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTA 217 |||||||||||||||||||| || |||||||||||||||||||| |||| | | || Sbjct 5 TATTTTGTTGGTTTCTAGGATCGAGATAATGATTAATAGGGATAGTTGGGGACATTAATA 64 Query 218 TTCAATTGTCAGAGGTGAAAT 238 | |||||||||||||||||| Sbjct 65 TATAATTGTCAGAGGTGAAAT 85 >seq44078 Length=9979 Score = 89.7 bits (98), Expect = 9e-16 Identities = 69/81 (85%), Gaps = 2/81 (2%) Strand=Plus/Minus Query 69 GGACTTTTACTTTGAAAAAATTAGAGTGTTC--AAAGCAGGCCTTTGCTCGAATACATTA 126 ||||||||||| ||| |||||||||||||| ||||||||| |||||| ||||| | Sbjct 95 GGACTTTTACTGTGAGAAAATTAGAGTGTTTTTAAAGCAGGCGTTTGCTTGAATATTGCA 36 Query 127 GCATGGAATAATAGAATAGGA 147 |||||||||||| |||||||| Sbjct 35 GCATGGAATAATGGAATAGGA 15 >seq4775 Length=494 Score = 87.8 bits (96), Expect = 3e-15 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 71 ACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCAT 130 ||||||||| || |||||||||||||| ||||||||| |||||| ||||| ||||| Sbjct 76 ACTTTTACTGCGAGAAAATTAGAGTGTTTAAAGCAGGCGTTTGCTTGAATATTGCAGCAT 17 Query 131 GGAATAATAGAATAGG 146 |||||||| ||||||| Sbjct 16 GGAATAATGGAATAGG 1 >seq14100 Length=793 Score = 77.0 bits (84), Expect = 6e-12 Identities = 56/65 (86%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATG 131 |||||||| ||| |||||||||||||| ||||||||| |||||| ||||| |||||| Sbjct 793 CTTTTACTGTGAGAAAATTAGAGTGTTTAAAGCAGGCGTTTGCTTGAATATTGCAGCATG 734 Query 132 GAATA 136 ||||| Sbjct 733 GAATA 729 >seq6733 Length=545 Score = 73.4 bits (80), Expect = 7e-11 Identities = 57/68 (84%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 78 CTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAATAA 137 || ||| |||||||||||||| ||||||||| |||||| ||||| |||||||||||| Sbjct 1 CTGTGAGAAAATTAGAGTGTTTAAAGCAGGCGTTTGCTTGAATATTGCAGCATGGAATAA 60 Query 138 TAGAATAG 145 | ||| || Sbjct 61 TGGAAAAG 68 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914792873280