Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeroforma_20sirkka_20[genbank_20GCA_5F001586965.1_202016-03-11] 44,485 sequences; 85,494,527 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq10978 233 8e-59 seq26214 185 4e-44 seq17268 167 1e-38 seq42694 154 6e-35 seq9315 150 7e-34 seq30652 125 3e-26 seq38148 116 2e-23 seq27918 78.8 4e-12 >seq10978 Length=672 Score = 233 bits (258), Expect = 8e-59 Identities = 169/194 (87%), Gaps = 1/194 (1%) Strand=Plus/Minus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||||| | | ||| | ||||||||||||||||||||||||||| || |||| ||||||| Sbjct 529 TGTGATACACTTTCAATGAGTCGAGTTGTTTGGGAATGCAGCTCAAATTGGGTGGTAAAT 470 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 | | ||||||||||||||||||| |||||||||||||| ||||||| |||| |||||| Sbjct 469 TCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGA 410 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 ||||||||||||||||||||||||| || || |||||||||||||| ||||||| ||||| Sbjct 409 TGAAAAGCACTTTGGAAAGAGAGTT-AACAGTACGTGAAATTGTTGGAAGGGAAACGCTT 351 Query 203 GCAACCAGACTTGC 216 | | ||||||||| Sbjct 350 GAAGTCAGACTTGC 337 Score = 179 bits (198), Expect = 2e-42 Identities = 144/173 (83%), Gaps = 2/173 (1%) Strand=Plus/Minus Query 379 TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAA 438 ||||||||||| | ||||| | ||| || ||||||||| ||||||||||||||||||||| Sbjct 171 TAGGATGCTGGTGGAATGGCTTTAAACGACCCGTCTTGAAACACGGACCAAGGAGTCTAA 112 Query 439 CATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGG 498 ||| |||||| ||||||||||||||||| ||| |||||||||||| | ||||||| Sbjct 111 CATGCTCGCGAGTATTTGGGTGTCAAACCCGGATGCGCAATGAAAGTGAATGTAGGTGGG 52 Query 499 AACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAG 551 |||| | ||||||||||||||||||| ||| | || |||||||||||| Sbjct 51 AACC--GCAAGGTGCACCATCGACCGATCTGGATTTTTTAAGATGGATTTGAG 1 >seq26214 Length=1507 Score = 185 bits (204), Expect = 4e-44 Identities = 147/176 (84%), Gaps = 2/176 (1%) Strand=Plus/Minus Query 508 GGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTT 567 ||||||| | ||||||| | |||| | | || || || |||| ||||||| |||| Sbjct 1494 GGGTGCAACGCCGACCGACCTTGATCTTCTGAGAAGGGTTCGAGT--GAGCATACCTGTC 1437 Query 568 GGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGG 627 |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct 1436 GGGACCCGAAAGATGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGG 1377 Query 628 AGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||| ||||||| | ||| ||||||||||| ||||| | |||||||||||||||| Sbjct 1376 AGGCCCGCAGCGATACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGA 1321 >seq17268 Length=935 Score = 167 bits (184), Expect = 1e-38 Identities = 164/213 (77%), Gaps = 18/213 (8%) Strand=Plus/Minus Query 409 CCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCC 468 |||||||| |||||||||||||||||||||||| ||||||||| |||||||| |||||| Sbjct 935 CCGTCTTGAAACACGGACCAAGGAGTCTAACATATATGCGAGTCTTTGGGTGAGAAACCC 876 Query 469 GTGCGCGTAATGAAAGTGAACG---------------GAGGTGGGAACCCGTGAGGGTGC 513 | | | |||||||||||| | |||||| ||||| | ||||| Sbjct 875 GCAGGAGCAATGAAAGTGAAGGTTAACACGGTTAGCTGAGGTGAGAACCGC--AAGGTGC 818 Query 514 ACCATCGACCGATCCTGATGTCTTCG-GATGGATTTGAGTAAGAGCATAGCTGTTGGGAC 572 | ||||||||| || ||| ||| || |||| ||||||||||| | ||||| ||| Sbjct 817 ATCATCGACCGTTCTGAATGGTTTCCTGAAAGATTCGAGTAAGAGCACATATGTTGAGAC 758 Query 573 CCGAAAGATGGTGAACTATGCCTGAATAGGGTG 605 |||||||||||||||||||||||||||| |||| Sbjct 757 CCGAAAGATGGTGAACTATGCCTGAATAAGGTG 725 >seq42694 Length=6486 Score = 154 bits (170), Expect = 6e-35 Identities = 174/233 (75%), Gaps = 20/233 (9%) Strand=Plus/Minus Query 380 AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAAC 439 |||||| ||| | ||||| | | ||||||||| |||||||||||||||||||||| Sbjct 291 AGGATGTTGGTGAAATGGCCTCATCAGTCCCGTCTTGAAACACGGACCAAGGAGTCTAAC 232 Query 440 ATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAA----------- 488 || ||||||||| |||||||| |||||||| ||| |||||||||||| Sbjct 231 ATATATGCGAGTCTTTGGGTGGCAAACCCGCAGGCGCAATGAAAGTGAAGGCTAACATGG 172 Query 489 ----CGGAGGTGGGAACCCGTG-AGGGTGCACCATCGACCGATCCTGAT-GTCTTCGGAT 542 | |||||| || | || | |||||| ||||| |||||| || || | | || Sbjct 171 TTAGCTGAGGTGAGATC---TGCAAGGTGCATCATCGGCCGATCTGAATGGTTTCCTGAA 115 Query 543 GGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCT 595 ||||||||| |||||| | ||||||||||||||| ||||||||||||||| Sbjct 114 AGATTTGAGTCAGAGCACATATGTTGGGACCCGAAAACTGGTGAACTATGCCT 62 >seq9315 Length=618 Score = 150 bits (166), Expect = 7e-34 Identities = 103/115 (90%), Gaps = 1/115 (1%) Strand=Plus/Minus Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628 |||||||||||||||||||||||||||||||||||||||| | || |||| || | |||| Sbjct 618 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGTCTGAAGAAATTCAGATGGA 559 Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||| |||| ||||| ||||| ||||||||||||||||||||||||||||||| Sbjct 558 AGCTCATAGCGATTCTGACGTGC-AATCGATCGTCAAATTTGGGTATAGGGGCGA 505 >seq30652 Length=1954 Score = 125 bits (138), Expect = 3e-26 Identities = 90/104 (87%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 580 ATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCG 639 |||| |||||||||||||||||||||||| | || |||| || | |||| ||||| | | Sbjct 1393 ATGGGGAACTATGCCTGAATAGGGTGAAGTCTGAAGAAATTCAGATGGAAGCTCGTAACA 1452 Query 640 GTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||| ||||||||||||||||||||||||| ||||||||||| Sbjct 1453 ATTCTGACGTGCAAATCGATCGTCAAATTTGGATATAGGGGCGA 1496 >seq38148 Length=3463 Score = 116 bits (128), Expect = 2e-23 Identities = 85/99 (86%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 ||| ||||||||||||||||| | |||||||| |||| ||||||| |||| |||||| Sbjct 3365 TTCATCTAAAGCTAAATATTGCCACGAGACCGACAGCGAACAAGTACCGTGAGGGAAAGA 3424 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAA 181 ||||||| |||||| ||||||||||||| || ||||||| Sbjct 3425 TGAAAAGAACTTTGAAAAGAGAGTTAAATAGTACGTGAA 3463 >seq27918 Length=1661 Score = 78.8 bits (86), Expect = 4e-12 Identities = 48/51 (94%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 633 CGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || |||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct 1661 CGTAGCGATTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 1611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079045796750