Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeroforma_20sirkka_20[genbank_20GCA_5F001586965.1_202016-03-11] 44,485 sequences; 85,494,527 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq6713 205 2e-50 seq15000 190 3e-46 seq31950 122 1e-25 seq620 80.6 5e-13 >seq6713 Length=545 Score = 205 bits (226), Expect = 2e-50 Identities = 141/158 (89%), Gaps = 1/158 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| |||| | | || ||||||||||||||||||||||||||||||| Sbjct 157 TACTAGGTTGAATTACTATTGCGAC-ACTGTCATCAGTAGGGTAAAACTAACCTGTCTCA 99 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||| || Sbjct 98 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 39 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAG 158 |||||||||| ||||||||||||||||||||||||| Sbjct 38 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAG 1 >seq15000 Length=830 Score = 190 bits (210), Expect = 3e-46 Identities = 140/163 (86%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 119 GAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCT 178 |||||| | ||| |||||||||||||||||||||| | |||||| ||||||||||||| Sbjct 168 GAATTCAGTTTCACAATGATAGGAAGAGCCGACATCGGAAGATCAATAAGCAACGTCGCT 109 Query 179 ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238 ||||| ||||| ||||||||||||| ||||||||||||||| |||||| |||||||||| Sbjct 108 ATGAAGGCTTGACTGCCACAAGCCAAATATCCCTGTGGTAACGTTTCTGACACCTCTAGC 49 Query 239 CTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCA 281 | |||||| | | ||||||||||||||||||| |||||| Sbjct 48 TTAAAATTTGTAAAGTCTAAAGGATCGATAGGCCATGCTTTCA 6 >seq31950 Length=2121 Score = 122 bits (134), Expect = 1e-25 Identities = 84/95 (88%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||||| |||||| |||| | || |||||||||||||||||||||||||||||| Sbjct 95 TACTAAGTTCAATTACTATTGCGATAACATTCATCAGTAGGGTAAAACTAACCTGTCTCA 36 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGT 95 |||||||||||||||||||||||||||||||||| Sbjct 35 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGT 1 >seq620 Length=410 Score = 80.6 bits (88), Expect = 5e-13 Identities = 44/44 (100%), Gaps = 0/44 (0%) Strand=Plus/Minus Query 252 GGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 |||||||||||||||||||||||||||||||||||||||||||| Sbjct 410 GGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 367 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854019920160