Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeroforma_20sirkka_20[genbank_20GCA_5F001586965.1_202016-03-11] 44,485 sequences; 85,494,527 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq2803 150 2e-34 seq44078 77.0 4e-12 seq9285 75.2 1e-11 seq4775 75.2 1e-11 >seq2803 Length=450 Score = 150 bits (166), Expect = 2e-34 Identities = 101/113 (89%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | |||||||||||||||||||||||||||| |||||| Sbjct 267 CTAGAAACCAACAAAATAGAACCAAACGTCCTATTCTATTATTCCATGCTAATATATTCG 208 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTC 118 || | |||||||||||||||||||||||| |||| |||||||||||||||| Sbjct 207 AGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTTC 155 >seq44078 Length=9979 Score = 77.0 bits (84), Expect = 4e-12 Identities = 66/81 (81%), Gaps = 2/81 (2%) Strand=Plus/Plus Query 34 TCCTATTCTATTATTCCATGCTAATGTATTCGGGCGTAAGCCTGCTTTGAA--CACTCTA 91 |||||||| ||||||||||||| ||||| || | ||||||||| || ||||||| Sbjct 15 TCCTATTCCATTATTCCATGCTGCAATATTCAAGCAAACGCCTGCTTTAAAAACACTCTA 74 Query 92 ATTTTCTCAAGGTAAAAGTCC 112 ||||||||| |||||||||| Sbjct 75 ATTTTCTCACAGTAAAAGTCC 95 >seq9285 Length=617 Score = 75.2 bits (82), Expect = 1e-11 Identities = 77/98 (79%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 ||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 294 CCAACGTAATAGGACCGAAA-TCCTATAATGTTATCCCATGCTAATGTATCCAGAGCGTA 236 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 235 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 198 >seq4775 Length=494 Score = 75.2 bits (82), Expect = 1e-11 Identities = 88/117 (75%), Gaps = 4/117 (3%) Strand=Plus/Plus Query 35 CCTATTCTATTATTCCATGCTAATGTATTCGGGCGTAAGCCTGCTTTGAACACTCTAATT 94 ||||||| ||||||||||||| ||||| || | ||||||||| |||||||||||| Sbjct 1 CCTATTCCATTATTCCATGCTGCAATATTCAAGCAAACGCCTGCTTTAAACACTCTAATT 60 Query 95 TTCTCAAGGTAAAAGTCCTGGTTCCTCCGCACAC-CAATGAAG---GCATACGGGCT 147 ||||| |||||||| | ||| | ||||| |||| ||| ||||||| || Sbjct 61 TTCTCGCAGTAAAAGTTCCAAACCCTGCCCACACTCAATTAAGAGCACATACGGTCT 117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594943499490