Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeroforma_20sirkka_20[genbank_20GCA_5F001586965.1_202016-03-11] 44,485 sequences; 85,494,527 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq21507 282 8e-74 seq42574 244 2e-62 seq33892 93.3 8e-17 seq31772 78.8 2e-12 >seq21507 Length=1174 Score = 282 bits (312), Expect = 8e-74 Identities = 196/221 (89%), Gaps = 1/221 (0%) Strand=Plus/Plus Query 108 TTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACAC 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 TTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACAC 60 Query 168 TGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCT 227 ||| | ||||||||| || ||||||||| ||||| |||||||||| | ||| | Sbjct 61 TGATGTATTCAACGAGTTTATAGCCTTGGCCGACAGGTCCGGGTAATCTT-TGAAATTTC 119 Query 228 GTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCG 287 ||||| |||||||||| |||||||||| ||| ||||||||||||||| ||||||||||| Sbjct 120 ATCGTGATGGGGATAGATCATTGCAATTGTTGGTCTTCAACGAGGAATTCCTAGTAAGCG 179 Query 288 CGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 || ||||||||| |||||||| ||||||||||||||||||| Sbjct 180 CGAGTCATCAGCTCGCGTTGACTACGTCCCTGCCCTTTGTA 220 >seq42574 Length=6330 Score = 244 bits (270), Expect = 2e-62 Identities = 209/257 (81%), Gaps = 1/257 (0%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131 |||| | ||||||||| ||||| || || || | |||||||||||| |||||||| || Sbjct 4685 CTTCATTGAGGGACTACCGGCTTAACCCATGGGGATTTTGAGGCAATATCAGGTCTGCGA 4744 Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191 ||||||||||||||||||| ||||||||||||||||||| || |||||||| | | | Sbjct 4745 TGCCCTTAGATGTTCTGGGTCGCACGCGCGCTACACTGATGAAGTCAACGAGT-CTTTTC 4803 Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251 || |||| |||| | ||||| || ||||| | |||||||||||||||| ||||| Sbjct 4804 CTACACCGGTAGGTGTATGTAATTTTTGGAAACTTTATCGTGCTGGGGATAGATGATTGC 4863 Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311 || |||| |||||||||| || |||||||||||| ||||| ||||| | |||||||| Sbjct 4864 AAATATTCACCTTCAACGAGATATTCCTAGTAAGCGCATGTCACCAGCATGTGTTGATTA 4923 Query 312 CGTCCCTGCCCTTTGTA 328 ||| ||||||||||||| Sbjct 4924 CGTTCCTGCCCTTTGTA 4940 >seq33892 Length=2418 Score = 93.3 bits (102), Expect = 8e-17 Identities = 80/98 (82%), Gaps = 1/98 (1%) Strand=Plus/Minus Query 74 TCTTAGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACA-GGTCTGTGAT 132 ||||||||||| ||| |||| | ||| |||| |||||||||||| || |||||||||| Sbjct 887 TCTTAGAGGGAGTATGGGCTTGACCCGGTGGACGTTTGAGGCAATCCCAGGGTCTGTGAT 828 Query 133 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGA 170 ||||| ||||||||| | ||||| |||||||||| Sbjct 827 GCCCTCCGATGTTCTGCCGTGTACGCGTGCTACACTGA 790 >seq31772 Length=2095 Score = 78.8 bits (86), Expect = 2e-12 Identities = 51/56 (91%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 95 AAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGG 150 || ||||||||| || |||||||||||||| |||||||||||||||| |||||||| Sbjct 1399 AAACCGATGGAACTTCGAGGCAATAACAGGCCTGTGATGCCCTTAGACGTTCTGGG 1344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946778638080