Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeroforma_20sirkka_20[genbank_20GCA_5F001586965.1_202016-03-11] 44,485 sequences; 85,494,527 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq620 444 2e-122 seq26214 118 3e-24 seq43042 100 9e-19 seq31222 100 9e-19 seq14398 80.6 9e-13 seq3344 80.6 9e-13 seq28722 77.0 1e-11 >seq620 Length=410 Score = 444 bits (492), Expect = 2e-122 Identities = 304/339 (90%), Gaps = 5/339 (1%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 335 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATC 276 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 275 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 216 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 | | || | |||||||| || ||||||||| |||| |||||||||||| ||||| Sbjct 215 AGTCTGCAAGAGACCTTAATGCTAGAAAATGGATAATGAAATCCAGTTCCGCTTAATTGA 156 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 ||||||||||||| |||| |||||||||||||||| |||||||| ||||||||||| Sbjct 155 ATAAGTAAAAAAACTATAAAGGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACTTA 99 Query 247 TTCTACA-CCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTT 305 ||||||| ||||| | ||| |||||||| ||| |||||||||||||||||||||||||| Sbjct 98 TTCTACACCCTCT-ATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTT 40 Query 306 CTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTG 344 |||||||||||||||| |||||||||||||||||||||| Sbjct 39 CTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTG 1 >seq26214 Length=1507 Score = 118 bits (130), Expect = 3e-24 Identities = 68/70 (97%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 466 CCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTG 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 CCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTG 60 Query 526 CGTCAACATC 535 ||| | |||| Sbjct 61 CGTAAGCATC 70 >seq43042 Length=7008 Score = 100 bits (110), Expect = 9e-19 Identities = 80/96 (83%), Gaps = 4/96 (4%) Strand=Plus/Minus Query 32 TCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGCC 91 |||| |||| | |||||||||||||||||||| |||||||||||||||||||||||| Sbjct 7008 TCTCATTGAGCTCACCTTAGGACACCTGCGTTATCATTTAACAGATGTGCCGCCCCAGCC 6949 Query 92 AAACTCCCCACCTGACAATGTCATCAACCCGGATCG 127 ||||| |||| || ||||| | ||| ||||||| Sbjct 6948 AAACTTCCCATCT----ATGTCTTAAACTCGGATCG 6917 >seq31222 Length=2025 Score = 100 bits (110), Expect = 9e-19 Identities = 70/80 (88%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 390 CCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAG 449 |||||||||| |||||||| |||||||| ||||||| || ||| | | |||| ||||||| Sbjct 313 CCATTCATGCACGTCACTAGTTAGATGATGAGGCATGTGACTATCGTGAGAGCGTCATAG 372 Query 450 TTACTCCCGCCGTTTACCCG 469 ||||||||| |||||||||| Sbjct 373 TTACTCCCGTCGTTTACCCG 392 >seq14398 Length=805 Score = 80.6 bits (88), Expect = 9e-13 Identities = 53/59 (90%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 38 TGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGCCAAACT 96 |||| | ||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct 287 TGAGCTCACCTTAGGACACCTGCGTCATCATTTAACAGATGTGCCGCCCCAGCCAAACT 345 >seq3344 Length=462 Score = 80.6 bits (88), Expect = 9e-13 Identities = 59/69 (86%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 364 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 423 ||||| ||||||||| ||||| || ||||||||| |||| |||| |||||| |||| || Sbjct 125 ATAGGCACAGTGGGAGTCTCGATAGTCCATTCATATGCGTTACTAGTTAGATAACGAAGC 184 Query 424 ATTTGGCTA 432 ||||||||| Sbjct 185 ATTTGGCTA 193 >seq28722 Length=1742 Score = 77.0 bits (84), Expect = 1e-11 Identities = 51/57 (89%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 353 CTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAA 409 |||| | ||||||||||||||||||||||||| || | |||||||||||||| |||| Sbjct 557 CTAGTTCGTAGATAGGGACAGTGGGAATCTCGGTAGTTCATTCATGCGCGTCGCTAA 501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634472581280