Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sphaeroforma_20sirkka_20[genbank_20GCA_5F001586965.1_202016-03-11]
44,485 sequences; 85,494,527 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq31950 232 1e-58
seq3313 149 1e-33
seq6713 107 3e-21
>seq31950
Length=2121
Score = 232 bits (256), Expect = 1e-58
Identities = 231/289 (80%), Gaps = 14/289 (5%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | |||||| |||||||||||||||||||||||| |||||| |
Sbjct 93 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 150
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 151 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 210
Query 121 GAACGGGGTGA-TTCTCTCCTGCA--CATCGTAGTCGGATACGAAT-AGGC----TTCGG 172
||| | | ||| |||| ||| || ||| |||| ||||| |||| |||| | |
Sbjct 211 GAAAGCGATGATTTCTTTCCCTCACTCATTCTAGTTGGATAAGAATAAGGCACTTTGTGT 270
Query 173 CCCCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAA--GCGCGGGGCGCTCAGCT 229
| | ||||| |||||||| || ||||| || |||||| || ||| ||| | |
Sbjct 271 CGCTGAACCATAGCAGGCTGGTAACGGTGCTCTTAGCGGAAAGGCTTTGGGTGCTTA-CC 329
Query 230 GGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||||||| ||||| ||| ||||| |||||||||||||| | |||||
Sbjct 330 GGCGGATAGCAATGTCATTATGCGTGAGGATAAATCCTTTGTATACGAC 378
>seq3313
Length=461
Score = 149 bits (164), Expect = 1e-33
Identities = 209/283 (74%), Gaps = 8/283 (3%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| || ||| | |||||||| |||||||||||| || | |||| |
Sbjct 442 GTACGAGAGGAACCGTTGA-TTC-GCGTAATTGGTATTTGCGGCTGTCCGATCGGGCAAT 385
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||| | ||||||||||||||||||||||||| |||||||| ||| |
Sbjct 384 GCCGCGAAGCTACCACGCGTTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 325
Query 121 GAACGGGGTGAT-TCTCTCCTGCACATCGTAGTCGGATACGAATAG-GCTTCGGC-CCCG 177
||| | |||| | ||| ||| ||| |||||| || |||| |||||||| |
Sbjct 324 GAA-ACGATGATGTTAGTCCCGCAAATCTTAGTCGAGTAAAGATAGAGCTTCGGCTCGTA 266
Query 178 AACCTTAGCAGGCCGGCAACGGGC-GTCCCGCGGAAGCGCGGGGC-GCTCAGCTGGCGGA 235
|||| ||| ||| || | | | || |||||| || || | || | |||| |
Sbjct 265 AACCATAGTTGGCTGGTCATGTTCTGTAGGGCGGAAAGGCCTTGCAGTTCTACCGGCGAA 206
Query 236 TTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
| ||| | | || || ||| |||||||||||||||||||
Sbjct 205 TAGCATTCGAAATATTTGCGGGGGTAAATCCTTTGCAGACGAC 163
>seq6713
Length=545
Score = 107 bits (118), Expect = 3e-21
Identities = 99/123 (80%), Gaps = 2/123 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| || ||| | | ||||||| | ||| || ||| || ||||
Sbjct 155 GTACGAGAGGAACCGTTGA-TTC-GCACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGT 212
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||||||||||| | ||||||||||| |||||||||||||||||||||||| || |
Sbjct 213 GGCGCGAAGCTACCGTGCGCTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTA 272
Query 121 GAA 123
|||
Sbjct 273 GAA 275
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 818846967040
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |