Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeroforma_20sirkka_20[genbank_20GCA_5F001586965.1_202016-03-11] 44,485 sequences; 85,494,527 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq44045 280 1e-70 seq39701 266 3e-66 >seq44045 Length=9771 Score = 280 bits (310), Expect = 1e-70 Identities = 591/874 (68%), Gaps = 12/874 (1%) Strand=Plus/Minus Query 65997 ACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACT 66056 |||| || ||||| || || || || || || ||||| | ||||| || | | |||| Sbjct 2315 ACTTAGGCAGGGCCAGGGACGCAAGATTACACACAGCCACTTCGTCGGGGGAAGAGTACT 2256 Query 66057 CGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCT 66116 |||| || || |||||||||| ||| ||||||||||||||||| || ||||||| Sbjct 2255 CGACGATCTCACAGCACAGATTAGAGCACTTGATGGTGCCCAAATTCTGCTGGTTACTCT 2196 Query 66117 TGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAA 66176 |||| ||||| ||||||||||||| |||||| || ||||||||||| || | ||| | Sbjct 2195 TGCGGTTGCACGCATCCTTGTACAGCATGTATGGTGTGCCGGTCTCGGTCTGCGCCTCTA 2136 Query 66177 TGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGT 66236 |||||| ||| || ||||||| | || || ||||| | ||| |||| Sbjct 2135 GAATGGCGAACCACAGCTGCTGTGCCTTGATTACTCGCTTAGCTCTACCCTCGCGCTCGT 2076 Query 66237 AATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGA----CAC 66292 | | | ||| || | ||| || | ||||| || ||| || | ||| ||| Sbjct 2075 ACTTGTGGTATAGATCTTCAAACTCCTTTCCCCAGACATCGTCCAAGCCTGGTGCATCAC 2016 Query 66293 TTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCA 66352 ||| ||| | | ||| ||| || || || ||| || |||||||||||| Sbjct 2015 TTG-GTG---AGAACAGACTCCACTCTCCGTCGGCTTCGCACCGTTCCATAAATAGATCG 1960 Query 66353 GGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTG 66412 ||||| ||| || |||| ||||| ||||| || |||||| || || || | Sbjct 1959 TTGATCCACAGGCCGAAGAAAAGATCACGTGCGCGCATCTCCTCTGAACC-TGTGTTCTT 1901 Query 66413 CGCAAG-TCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGA 66471 | || || |||||||||||||| || || ||||| || || ||||| || || || | Sbjct 1900 CTTTAGATCCAGGAACTCAAAGATATCTGCGTGCCAGGGCTCTAGGTACATTGCAAATGC 1841 Query 66472 GCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAA 66531 || ||| ||| ||||||||||| |||||||| ||| |||||||| ||||||| Sbjct 1840 TCCAGGACGCTTGTTACCACCTTGGTCAACGTAGCGTGCGGTGTTGTTGAATACACGCAG 1781 Query 66532 CATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCG 66591 ||| || || || |||||||| || |||||||| || ||||| | | || | | Sbjct 1780 CATAGGCACAAGTCCGTTAGAGTTTCCATTGGTTCCAGCGATGTAGCTTTCTTTGGATCT 1721 Query 66592 TATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGC 66651 || | |||||| || || || ||||| ||||| |||| ||||| || || Sbjct 1720 GATCTTGTGAACGTTGAGTCCGATACCTCCGGCACTCTTGGAGATCATCGCGCAGGTCTT 1661 Query 66652 CACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACT 66711 || || | | || || ||||||||||| ||| ||| || || ||| | || || Sbjct 1660 CAGGGTGTTGTAGATACCTTCAATGGAGTCGTCCTCGATTGTGAGAAGGAAACACGATGA 1601 Query 66712 AAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATG 66771 || ||||| |||| |||| ||| ||||| |||| |||||| ||||| || Sbjct 1600 TAGCTGGGGACGTCTTGTGCCGGCGTTGAACAGGGTAGGTGAAGCGTGTGTAAACCAACC 1541 Query 66772 GCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAAT-CCCGA 66830 | || | || ||||| || || || | |||| |||| |||||||| || ||| Sbjct 1540 CTGTGATAGGTTGTTGTATGTTTCAATAGCCCCATCGATGTCGTCGCCATGGATACCCAC 1481 Query 66831 GTGCACATCGCATCAGGAGGTATTGAGGCCGTTC 66864 |||| ||||| || | || ||||| || || Sbjct 1480 ACTCACA-CGCATAAGCATGTGCTGAGGTCGCTC 1448 >seq39701 Length=4095 Score = 266 bits (294), Expect = 3e-66 Identities = 541/786 (69%), Gaps = 27/786 (3%) Strand=Plus/Plus Query 61041 AGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTA 61100 ||| || |||||||| ||||| | ||||| ||| | || |||| || |||| ||||| Sbjct 2174 AGAAAACCCTCGTCGCTTCGTGCTATTCCCTATCCAATACCAGGAGATCTGGCAGATGTA 2233 Query 61101 CAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAA 61160 ||| |||||||| ||||| |||||||| || |||||||| ||| |||| || | Sbjct 2234 CAAGAAGGCGGAGGCTTCTTTCTGGACTGTTGAGGAGGTTGATCTGTCTCGTGATCTAGC 2293 Query 61161 TGACTGGGAGCGT-TTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCT 61219 |||||||||| ||| || || || | || ||| | ||||||||||| |||| Sbjct 2294 TGACTGGGAGAACCTTAAGGAT-GGCGAGCGCCACTTCTTATCCCATGTGTTGGCTTTCT 2352 Query 61220 TTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAG-GAGGTG 61278 | || || || ||||| || || |||||| | | || || ||| || | || || Sbjct 2353 TCGCTGCCAGTGATGGTATTGTGAACGAGAATCTCCTCGAGCGCTTCA-GCGGTGAAGTA 2411 Query 61279 CAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCG 61338 ||| | | ||||| ||||| |||||||| |||||||| ||||| ||||| ||||||| Sbjct 2412 CAAATCGCCGAGGCACGTTGCTTCTACGGATTCCAGATCGCCATTGAGAACATCCACTCT 2471 Query 61339 GAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGG-GCG-GAACGTGAACGAT 61396 ||||||||| || ||||| || |||||| | || | | | ||| | ||| Sbjct 2472 GAGATGTACTCCACGCTTATCGAGACATACATCCGTGACCCCCGTGAGAAGGATAACC-- 2529 Query 61397 TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATT 61456 | || || || || ||||| | || || || ||| || || || |||||| |||| | Sbjct 2530 TATTTAACGCTATTGAGACACTCCCTGCCGTCAAGAAAAAGGCCGACTGGGCCCTCAAGT 2589 Query 61457 GGATCACCAGTACAACGGCTACATTT--GGTGAACGATTGCTGGCATTTGCGGTGGTCGA 61514 |||||| | || | | || || || ||||| || || | || || || | || || Sbjct 2590 GGATCAACG--ACGATGCCTCCAGTTTCGGTGAGCGTGTGGTAGCCTTCGCTGCAGTAGA 2647 Query 61515 GGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTAT 61574 |||| | |||||| ||| || |||||| | ||||||||| ||||||| ||||| || || Sbjct 2648 GGGTATCTTTTTCTCTGGCTCCTTTGCCTCGATCTTTTGGATGAAGAAGCGTGGGCTAAT 2707 Query 61575 GCCCGGTCTGACCTTCAGCAATGAGTTGAT-ATCACGCGACGAGGGCATGCATTGTGATT 61633 ||| || || || ||| |||||||||||| | || | || ||||| | || ||||| | Sbjct 2708 GCCTGGACTAACTTTCTCCAATGAGTTGATCAGCA-GAGATGAGGGACTCCACTGTGACT 2766 Query 61634 TTGCTGTTTTGCTATTCAAACGCTATCTG----GTGAATCGTCCGTCGGAGGAGCGTG-T 61688 ||||| | ||||| | | | | ||| || || | || || || |||| Sbjct 2767 TTGCTTGTCTGCTACACGA---CCACCTGGAACGTAAACCCAGCGCCGAAG--TCGTGAA 2821 Query 61689 GGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCC 61748 | || ||||| || || || | ||||| || ||||| ||||| || || | || Sbjct 2822 GAGTATCATTGT---AGATGCTGTTAAGATCGAGCAAGAATTCCTGACGGATGCCCTTCC 2878 Query 61749 CGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGA 61808 ||| | || || || |||||| || |||| ||||| || || || || ||||| Sbjct 2879 CGTGGCTCTAATTGGAATGAATCACAAGCTTATGTGCCAGTACATCGAGTTCGTGGCCGA 2938 Query 61809 CCGTCT 61814 ||| || Sbjct 2939 CCGCCT 2944 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397352454160400