Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeroforma_20sirkka_20[genbank_20GCA_5F001586965.1_202016-03-11] 44,485 sequences; 85,494,527 total letters Query= NC_031927.1 Length=216121 Score E Sequences producing significant alignments: (Bits) Value seq37209 87.8 2e-12 >seq37209 Length=3165 Score = 87.8 bits (96), Expect = 2e-12 Identities = 163/234 (70%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 162606 TGCCTCTAGCGGTATTCTATTCAATCACGAAAGCTCACGCAGAGGAGAGACGTTCGTCAC 162665 ||||| | |||||| || ||||| ||||| | || | |||||||| |||||||| Sbjct 2088 TGCCTGCAACGGTATCCTGTTCAACCACGAGTCTCCCCGTCGTGGAGAGACCTTCGTCAC 2147 Query 162666 ACGCAAGATCGTCCGAGCCTTGTCCCGAATTA-GTGTGGGACTCCAAAGTGATCTACAAC 162724 |||||||| ||| ||| || ||| || | || || | | | || ||| | | Sbjct 2148 GCGCAAGATTACCCGCGCCGTGGCCCAGATCAAGTACGGCAAACAGGACTGC-CTATACC 2206 Query 162725 TTGGAAACCTCAATGCCCGACGTGACTGGGGACACGCCAAAGACTACGTAGAGGCTATGT 162784 | |||||| | | ||| ||||| ||||| |||||| ||||||||||||||||||| Sbjct 2207 TAGGAAACATGGACGCCAAGCGTGATTGGGGTCACGCCCGTGACTACGTAGAGGCTATGT 2266 Query 162785 GGTTGATGCTTCAGCAAGA-GAAGCCAGATGATTATGTGATCGCAACTGGTGAG 162837 || ||| || ||| || | ||| || |||| ||| ||| || |||||| Sbjct 2267 GGAGGATTCTACAGGCCGATGTTGCC-GACGATTTTGTATGCGCCACCGGTGAG 2319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 691074705468600