Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spironucleus_20salmonicida_20[genbank_20GCA_5F000497125.1_202013-11- 19] 233 sequences; 12,954,588 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq1 286 6e-75 >seq1 Length=5841 Score = 286 bits (316), Expect = 6e-75 Identities = 216/252 (86%), Gaps = 2/252 (1%) Strand=Plus/Minus Query 35 CAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAG 94 |||||||||||||||||||||||||| |||||||||||||||||||||||||||| | Sbjct 4682 CAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTTGCAC 4623 Query 95 TGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATC 154 ||||||||||||| || ||| | |||| ||||| | ||||||||||||||||||||| Sbjct 4622 -GGGTGAACAATCCGACACTTTCACAATTATGCTTGTGAATGATAGGAAGAGCCGACATC 4564 Query 155 GAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGT 214 |||| |||||||||| |||||||||||| |||||||| |||||||||||||||||||||| Sbjct 4563 GAAGAATCAAAAAGCCACGTCGCTATGATCGCTTGGCGGCCACAAGCCAGTTATCCCTGT 4504 Query 215 GGTAACTTTTCTGGCACCTCTAGCCTCA-AATTTCGAGGGACTAAAGGATCGATAGGCCA 273 ||||||||||||| ||||| || | | ||| | | |||||||||||||||||| Sbjct 4503 GGTAACTTTTCTGTCACCTTTATGTTAACAATCTAAACAAGTTAAAGGATCGATAGGCCA 4444 Query 274 CACTTTCATGGT 285 | |||||| ||| Sbjct 4443 CGCTTTCACGGT 4432 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854398009248