Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spironucleus_20salmonicida_20[genbank_20GCA_5F000497125.1_202013-11- 19] 233 sequences; 12,954,588 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq1 89.7 1e-15 >seq1 Length=5841 Score = 89.7 bits (98), Expect = 1e-15 Identities = 157/226 (69%), Gaps = 7/226 (3%) Strand=Plus/Plus Query 103 GGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGC 162 ||||| ||||||| ||||||||||||||||||||||| | || ||||||||||| | Sbjct 1482 GGAAGGCAGAGGCAAAAACAGGTCTGTGATGCCCTTAGAAGCCCTAGGCCGCACGCGTAC 1541 Query 163 TACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAA 222 |||| || ||| || || ||| ||| || ||| | || | | | |||| Sbjct 1542 TACAATGGCAGGTTCATCGTGTT-----GCTT-CCCTGAAAATGGTGGCAGT-TCATTAA 1594 Query 223 ACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGT 282 | ||||||| | || | || ||| |||||| || | || |||||||| ||||| Sbjct 1595 AACTTGTCGTGGTTAGGCTTGAAGGTTGAAATTATCCTTCATAAATGAGGAATGTCTAGT 1654 Query 283 AAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||| | || || | || ||||||||||||| ||| ||||| Sbjct 1655 AAGTGTAGGTTATGAATCTACGCTGATTACGTCCCTACCCCTTGTA 1700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947197793024