Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tritrichomonas_20foetus_20[genbank_20GCA_5F001839685.1_202016-10-25] 1,480 sequences; 67,585,742 total letters Query= NC_031903.1 Length=172345 Score E Sequences producing significant alignments: (Bits) Value seq769 93.3 5e-14 >seq769 Length=64858 Score = 93.3 bits (102), Expect = 5e-14 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 153571 GCAGTTGCTAATGTTAACATCCTGGAAGGCATTCGTTTCTACGTTTCCTTCGCGTGTTCG 153630 ||| ||| ||||| ||||| || ||||| ||||||||||||||||| ||||| || || Sbjct 8718 GCACTTGTAAATGTGAACATTCTTGAAGGAATTCGTTTCTACGTTTCTTTCGCATGCTCT 8659 Query 153631 TTTGCTTTTGGCGAAAATAAACTTATGGAGGGCTCAGCAAAGATACTCTCTCTTATTGCT 153690 ||||| || || ||||||||| | |||| || ||| || | || || || Sbjct 8658 TTTGCATTCGGTGAAAATAAATTAATGGTTGGAAATGCATCAATCATTAAGCTCATCGCA 8599 Query 153691 AGAGATGAAAGTCAACATCTGGTTCTCACGCAGAATATTCTCAA 153734 | |||||| |||||||||| |||| | ||| || |||| || Sbjct 8598 ACTGATGAATGTCAACATCTCATTCTTTCTCAGTATCTTCTAAA 8555 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 551365799544000