Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650065.1_202016-05-23] 82 sequences; 6,346,114 total letters Query= NC_007817.1 Length=5486 Score E Sequences producing significant alignments: (Bits) Value seq24 203 1e-48 >seq24 Length=1130 Score = 203 bits (224), Expect = 1e-48 Identities = 538/808 (67%), Gaps = 44/808 (5%) Strand=Plus/Plus Query 4138 TAATCAGGTCTTCTCCGTCTGTGCTCACATCACATCTGACGTGGACCCTAAATATATTGC 4197 ||||||||| | || || ||||| | || | | ||| | |||||||||| | |||| Sbjct 288 TAATCAGGTTGTTTCTGTTGGTGCTGATATTGCTTTTGATGCCGACCCTAAATTTTTTGC 347 Query 4198 GTGCCTCGTTCGCTTTGAGGTCACTGCTGGTACCACTCCTACCGCTATGCCTCCTGTCTA 4257 || | |||||||||||| || | | | | ||| | || | || ||| ||| Sbjct 348 CTGTTTGGTTCGCTTTGAGTCTTCTTCGGTTCCGACTAC--CCTC----CCGACTGCCTA 401 Query 4258 TGATGCTTACCCTATCGCTGGTTACTATGACGCTGGCTCTTATACTGTTGAAGACTGCGC 4317 ||||| ||| ||| | | |||| | |||| | ||| | |||||| || | ||||| | Sbjct 402 TGATGTTTATCCTTTGGATGGTCGCCATGATGGTGGTTATTATACCGTCAAGGACTGTGT 461 Query 4318 TACTATT--CCTACTCACGCTGTCTCTTCTGGCAACGATGTATATGTCGGCCTTATGCTT 4375 |||||| | | || | | | | | ||||| |||| ||||| || | ||| || Sbjct 462 GACTATTGACGTCCTTCCCCGTACGC--CGGGCAATAATGTTTATGTTGGTTTCATGGTT 519 Query 4376 TTCTCTCGCATGTGGCCCGTTGCAAAACTATCCGGTATCGCTTCCCTTAATCAGGTAAAC 4435 | ||| | | ||| | | ||| ||| | | ||| || |||||||| | Sbjct 520 TGGTCTAACTTTA---CCGCTACTAAATGCCGCGGATTGGTTTCGCTGAATCAGGTTATT 576 Query 4436 AAGGAAGTAACCGTTCTCCAACCTCTTAAATAAGGT-ATTCTCTATGTTTGGTGCAATCG 4494 || || | | |||||| || ||||| | |||| ||| |||||||||||| || | Sbjct 577 AAAGAGATTATTTGTCTCCAGCCACTTAAGTGAGGTGATT---TATGTTTGGTGCTATTG 633 Query 4495 CTGGCGGTATCGCCTCATCTCTTGCTGGCGGACTCATCAACAAAGCCTTTGGGGGCGGTC 4554 |||||||||| || || |||||||||| || ||| ||| ||||| ||||||| Sbjct 634 CTGGCGGTATTGCTTCTGCTCTTGCTGGTGGCGCCATGTCTAAATTGTTTGGAGGCGGTC 693 Query 4555 AATCCGCCTCCTCTACTGGCGTTCAAGGTGATGTCCTCGCTTC---TGACAATAACGTA- 4610 || ||| |||| |||| ||||||||||||| || ||| | | |||||| ||| Sbjct 694 AAAAAGCCGCCTCCGGTGGCATTCAAGGTGATGTGCTTGCTACCGATAACAATACTGTAG 753 Query 4611 --ATCGGTGCTAATGATGCTGGTATCAAATCCGCTATTCAAGGCTCTAATCCACCCAATG 4668 || || |||||||||||| ||||| || ||||||||||||||| || || Sbjct 754 GCATGGG------TGATGCTGGTATTAAATCTGCCATTCAAGGCTCTAATGTTCCTAACC 807 Query 4669 GCCAACAAGCTGCTCCCAATGCTATTTCGGGCGTTCTCGCTGACACTGGCAAA-GACGCC 4727 | | || | || | | | |||| || | | | ||| | |||| ||| ||| | Sbjct 808 CTGATGAGGCCGTCCCTAGTTTTGTTTCTGGTGCTATGGCTAAAGCTGGTAAAGGACTTC 867 Query 4728 CT--ATCTTCAAT-CA--CTGGC---GCTGGCGT---TAATAAACTTATGGAAAAAATCG 4776 | | | | | || ||||| ||| ||| | |||| | | || | | Sbjct 868 TTGAAGGTACGTTGCAGGCTGGCACTTCTGCCGTTTCTGATAAGTTGCTTGATTTGGTTG 927 Query 4777 GACTATCT---AAAACTGCTGCTGATAAAGGCAAGGACACAAAGGATTATCTTGCTTCTG 4833 |||| | || |||| ||||||||||| ||||| || |||||||||||| ||| Sbjct 928 GACTTGGTGGCAAGTCTGCCGCTGATAAAGGAAAGGATACTCGTGATTATCTTGCTGCTG 987 Query 4834 CATTCCCCGACCTCAACCCGTGGGAACGTGCTGGCGCTGGTGCTTCGTCTGCTGGCATGG 4893 |||| || || || || | ||||| |||||||| |||| |||||| |||||||| |||| Sbjct 988 CATTTCCTGAGCTTAATGCTTGGGAGCGTGCTGGTGCTGATGCTTCCTCTGCTGGTATGG 1047 Query 4894 TTGACGCTGGCTTCCAAAACCAAAAAGA 4921 ||||||| || || | || |||||||| Sbjct 1048 TTGACGCCGGATTTGAGAATCAAAAAGA 1075 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17443184355630