Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650075.1_202016-05-23] 250 sequences; 6,800,559 total letters Query= NC_001420.2 Length=5577 Score E Sequences producing significant alignments: (Bits) Value seq81 1438 0.0 >seq81 Length=7067 Score = 1438 bits (1594), Expect = 0.0 Identities = 2041/2844 (72%), Gaps = 66/2844 (2%) Strand=Plus/Plus Query 842 CGTGACTACTTCCGTGATATTGGTCGTATGGTGCTTACTGCCGAAGGTCGCTCGGTGCAT 901 |||||||| || |||||||||||||||||||| ||| ||||||| |||||| || || Sbjct 2 CGTGACTATTTTCGTGATATTGGTCGTATGGTTCTTGCTGCCGAGGGTCGCAAGGCTAAT 61 Query 902 GACTCATCTTCCGACTGCTATCAGTATTTTTGTGTGCCAGAGTATGGTACACAGCACGGT 961 || ||| |||||||||||||||||||||||||||| |||||||||||| | || Sbjct 62 GATTCACACGCCGACTGCTATCAGTATTTTTGTGTGCCTGAGTATGGTACAGCTAATGGC 121 Query 962 CGTCTACATTTCCACGCAGTGCATCTTATGCGCACACTTCCTCTGGGTTCTCTGCACCCT 1021 ||||| |||||||| || ||||| ||||||| ||||||||| ||| | ||||| Sbjct 122 CGTCTTCATTTCCATGCGGTGCACTTTATGCGGACACTTCCTACAGGTAGCGTTGACCCT 181 Query 1022 AACTTCGGTAAGCTGGTACGCATCAATCGGCAAATAAATAGCTTGCAAAACACGTGGCCT 1081 || || ||| | |||||||| || || |||||||||||||||| ||||||||| Sbjct 182 AATTTTGGTCGTCGGGTACGCAATCGCCGCCAGTTAAATAGCTTGCAAAATACGTGGCCT 241 Query 1082 TATGGTTACTCTATGCCCATCGCAGTCCGGTACTCCCAAGACGCATTCTCTCGCGCTGGC 1141 ||||||||| ||||||||||||||| || ||| | || ||||| || || || |||| Sbjct 242 TATGGTTACAGTATGCCCATCGCAGTTCGCTACACGCAGGACGCTTTTTCACGTTCTGGT 301 Query 1142 TGGCTCTGGCCTGTGGACTCAAAGGGTGAACCCCTTAAAGCTACCTCGTATATGGCTGTA 1201 ||| | |||||||| || | || ||||| || |||||||||||| ||||||||||| Sbjct 302 TGGTTGTGGCCTGTTGATGCTAAAGGTGAGCCGCTTAAAGCTACCAGTTATATGGCTGTT 361 Query 1202 GGCTTCTACGTTGCTAAATACGTTAACAAAAAATCAGATATTGACATGGCCGTAAAAGGC 1261 || ||||| || |||||||||||||||||||| |||||||| ||| | || | ||||| Sbjct 362 GGTTTCTATGTGGCTAAATACGTTAACAAAAAGTCAGATATGGACCTTGCTGCTAAAGGT 421 Query 1262 CTAGGGAATAAAGAATGGAACAATTCACTCAAAACCAAAATCAACCTCATACCCAAGAAA 1321 ||||| ||||||||||||||| ||||| |||||||| | || | |||||||| Sbjct 422 CTAGGAGCTAAAGAATGGAACAACTCACTAAAAACCAAGCTGTCGCTACTTCCCAAGAAG 481 Query 1322 GTGTTCAGAATACGAATGTCTCGCAATTTCGGAATGAAACTGTTATCAATGGCTCACCTG 1381 |||||||||| ||||| ||||| ||||| |||||| || | ||||| | | ||| Sbjct 482 CTGTTCAGAATCAGAATGAGCCGCAACTTCGGGATGAAAATGCTCACAATGACAAATCTG 541 Query 1382 TCAGCGGAAACCCTGATGGAACTGACCCAAGTGGGTTACGACGTGACCCCGTTCAACAAC 1441 || |||| | | || |||| ||| | |||||||||||| ||| ||||||||| | Sbjct 542 TCCACGGAGTGCTTAATCCAACTTACCAAGCTGGGTTACGACGCGACGCCGTTCAACCAG 601 Query 1442 ATCTTGAAGCAGAACGCCAAGAAAGAGCTCAAATCGAGGCTGGCAAAGAAATCTGTCGCC 1501 || |||||||||||||| || | |||| | | || |||||||| ||| |||| ||| Sbjct 602 ATATTGAAGCAGAACGCAAAAAGAGAGATGAGATTGAGGCTGGGAAAAGTTACTGTAGCC 661 Query 1502 GACGTTTTGGAGGCGCAACCTGTGACGACGAATCTGCTAAAATTCATGCGCAATTTGACC 1561 |||||||||| |||||||||||||||||| |||||||| ||||| |||||| || || Sbjct 662 GACGTTTTGGCGGCGCAACCTGTGACGACAAATCTGCTCAAATTTATGCGCGCTTCGATA 721 Query 1562 CGAACAATCGGAGCGTCCAACCTACAGAGTTTTATCGCTTCAATGACCACGAAATTAACA 1621 || || || | |||||||| ||||||||||||||||| ||||| ||| |||||| Sbjct 722 AAAATGATTGGCGTATCCAACCTGCAGAGTTTTATCGCTTCCATGACGCAGAAGTTAACA 781 Query 1622 AGTACGGATATTTCTGATGAAACCAAAAACTACGTTGCTTCTGCAGGAATTGCTGTTGCT 1681 | |||||||||||||||| | ||||| || ||| | ||||||||| || |||| Sbjct 782 CTTTCGGATATTTCTGATGAGTCGAAAAATTATCTTGATAAAGCAGGAATTACTACTGCT 841 Query 1682 AACTTACGAATTAAATCGAAGTGGACTGCTGGTGGAAAATGAGGAAATTCAATCTCAACT 1741 ||||||||||||||||||||||||||||| |||||||||| |||||| | || || Sbjct 842 TGTTTACGAATTAAATCGAAGTGGACTGCTGGCGGAAAATGAGAAAATTCGACCTATCCT 901 Query 1742 TAAAAAACTCGAGGTCGTCTTACTTTGCAACCTTTCGCCATCATCTCAACG-TGCTGGCA 1800 | | |||||| ||||||||||| |||||||||||||| || |||| | ||| || Sbjct 902 TGCGCAGCTCGAGAAGCTCTTACTTTGCGACCTTTCGCCATCAACT-AACGATTCTGTCA 960 Query 1801 AAAACTGACGCCCTTGACGAGGAGAAATACTTAAATATGTTAGGTGCTCTCCTCAAGGAC 1860 ||||||||||| | || |||||||| | | |||||| | || | || |||||||| Sbjct 961 AAAACTGACGCGTTGGATGAGGAGAAGTGGCTTAATATGCTTGGCACGTTCGTCAAGGAC 1020 Query 1861 TGGTTCCGGTACGAAGAACATTTCGTGCATGGTAAACAATCAATGCTTGACATACTGAAA 1920 ||||| | || || |||||| || ||||||| | | || | ||||||| | ||| Sbjct 1021 TGGTTTAGATATGAGTCACATTTTGTTCATGGTAGAGATTCTCTTGTTGACATTTTAAAA 1080 Query 1921 GAACGTGGCCTATTATCCACATCGTCAACTGACACAAACCAC--AAAGGAAACTGAAATG 1978 || ||||| || |||| || ||| |||||| | ||| || ||||| Sbjct 1081 GAGCGTGGATTACTATCTGAGTCCGATGCTG--TTCAACCACTAATAGGTAA--GAAAT- 1135 Query 1979 TCTAAATCAA---AC-GAATCTGCTGTAGCCTTTCAAACTGCTATCGCTTCTATCAAACT 2034 | | |||| || ||| | ||| || || || ||| | || ||||| || || Sbjct 1136 CATGAGTCAAGTTACTGAACAATCCGTACGTTTCCAGACCGCTTTGGCCTCTATTAAGCT 1195 Query 2035 TATTCAAGCATCTTCTGTTCTTGACTTGACAGAGGACGATTTTGACTTCTTAACTCGCGA 2094 ||||| || ||| | ||| | || || || || || ||||| || || | || | | Sbjct 1196 CATTCAGGCTTCTGCCGTTTTGGATTTAACCGAAGATGATTTCGATTTTCTGACGAGTAA 1255 Query 2095 CCGTGTCTGGATTGCTACCGACCGTTCACGCGCTCGCCG-TGCTATCGAGGCTTGCGTAT 2153 | || ||||||||||| ||||| || || ||||| || ||| | ||||||||||| | Sbjct 1256 CAAAGTTTGGATTGCTACTGACCGCTCTCGTGCTCGTCGCTGC-GTTGAGGCTTGCGTTT 1314 Query 2154 ATGGAACACTGGACTTTGTCGGGTATCCTCGCTTTCCTGCTCCTGTTGAGTTTATTTCTG 2213 |||| || ||||||||||| || || |||||||||||||||||||||||||||||| ||| Sbjct 1315 ATGGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTCCTGTTGAGTTTATTGCTG 1374 Query 2214 CCGTCATTGCTTATTACGTTCATCCCGTTAACATCCAAACCGCCTGTCTCATCATGGAAG 2273 |||||||||||||||| ||||||||||| ||||| ||||| ||||||||||||||||||| Sbjct 1375 CCGTCATTGCTTATTATGTTCATCCCGTCAACATTCAAACGGCCTGTCTCATCATGGAAG 1434 Query 2274 GTGCTGAGTTTACCGAAAACATCGTCAATGGTGTTGAACGCCCCGTTAAAGCCTCTGAAC 2333 | ||||| ||||| |||||||| | ||||| || || || || ||||||||| ||||| Sbjct 1435 GCGCTGAATTTACGGAAAACATTATTAATGGCGTCGAGCGTCCGGTTAAAGCCGCTGAAT 1494 Query 2334 TGTTCGCCTTCACTCTTCTTGTTCGCGCCGGAAACAAAGATCTTATCGGTCACGCTGAAA 2393 ||||||| || || | | ||| ||||| ||||||| || || | | |||| ||| Sbjct 1495 TGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAACACTGACGTTCTTACTGACGCAGAAG 1554 Query 2394 CAAACATCCGTGAACAGTTACGCGCTCAAGGTGTCATGTAAAGACCTTTGATTTTATCGT 2453 |||| | ||| || | ||||| || |||| || |||||| | | | | || Sbjct 1555 AAAACGTGCGTCAAAAATTACGTGCAGAAGGAGTGATGTAATG--------TCTAAAGGT 1606 Query 2454 CTTCACTTTTAAGGAGTT----ATGTAATGAAAAAATCAATTCGCCGCTCTGGTGGCAAA 2509 | || || | | || | | | || | || ||||| Sbjct 1607 AAAAAACGTTCTGGCGCTCGCCCTGGTCGTCCGCAGCCGTTGCGAGGTACTAAAGGCAAG 1666 Query 2510 TCTAAGGGTGCCCGTCTCTGGTATGTAGGCGGAACACAATACTAATCTTTTATGTGGGAC 2569 ||| || || ||||| ||||||||||| || ||||| ||| || | ||| | Sbjct 1667 CGTAAAGGCGCTCGTCTTTGGTATGTAGGTGGTCAACAATTTTAA--TTGCA---GGGGC 1721 Query 2570 CGCGGTCCCACTCTATTTAAGGATACAAAAATGTCTAACGTTCAAACATCTGCGGACCGT 2629 ||| ||| || || |||||| || |||||||| ||||||| || || ||| Sbjct 1722 TTCGGCCCC---TTACTTGAGGATA-AATTATGTCTAATATTCAAACTGGCGCCGAGCGT 1777 Query 2630 GTACCTCATGACTTATCTCACCTTGTCTTTGAGGCTGGTAAAATTGGCCGCCTCAAAACT 2689 | || |||||| | || || |||| ||| |||||| | ||||| || || | || Sbjct 1778 ATGCCGCATGACCTTTCCCATCTTGGCTTCCTTGCTGGTCAGATTGGTCGTCTTATTACC 1837 Query 2690 ATCTCTTGGACGCCTGGTGGTGCTGGTGACTCTTTCGAGTGTGATATGGTTGGCGCTATT 2749 || || || || | | ||||| ||||| |||||| || ||||||||| | Sbjct 1838 ATTTCAACTACTCCGGTTATCGCTGGCGACTCCTTCGAGATGGACGCCGTTGGCGCTCTC 1897 Query 2750 CGTCTGTCCCCTCTTCGTCGTGGCCTCGCTGTTGACTCACGCGTTGATATCTTTCCTTTC 2809 ||||| || || | ||||||||||| ||| ||||||| || || || ||| |||| Sbjct 1898 CGTCTTTCTCCATTGCGTCGTGGCCTTGCTATTGACTCTACTGTAGACATTTTTACTTTT 1957 Query 2810 TATATCCCACACCGTCATATCTACGGTCAGCAGTGGATTAACTTTATGAAGGATGGCGTT 2869 ||| |||| || ||||| | || ||| | ||||||||||| || ||||||||||| ||| Sbjct 1958 TATGTCCCTCATCGTCACGTTTATGGTGAACAGTGGATTAAGTTCATGAAGGATGGTGTT 2017 Query 2870 AATGCCTCCCCTCTTCCTCCTGTTACATGCTCCTCTGGTT---GGGACTCTGCTGCTTAT 2926 |||||| | ||||| || |||||| | | |||||| ||| ||| |||| | Sbjct 2018 AATGCCACTCCTCTCCCGACTGTTA---ACACTACTGGTTATATTGACCATGCCGCTTTT 2074 Query 2927 CTCGGTACCATTCCGTCTTCTACCCTTAAAGTGCCTAAATTCTTACATCAGGGCTATCTG 2986 || || || ||| || |||| |||| | ||||| || |||||| ||| || Sbjct 2075 CTTGGCACGATTAACCCTGATACCAATAAAATCCCTAAGCATTTGTTTCAGGGTTATTTG 2134 Query 2987 AATATTTATAATAACTACTTCAAACCGCCTTGGTCTGATGACTTAACTTAC----GCTAA 3042 ||||| ||||| ||||| || ||| |||| || |||| || | | ||| ||||| Sbjct 2135 AATATCTATAACAACTATTTTAAAGCGCCGTG----GATGCCTGACCGTACCGAGGCTAA 2190 Query 3043 CCCATCCAATATGCCT--TC-TGAGGATTATAAATGGGGCGTACGTGTCGCTAACCTTAA 3099 || | ||| || | || || ||| | | || | ||| | | || || Sbjct 2191 CC---CTAATGAGCTTAATCAAGATGATGCTCGTTATGGTTTCCGTTGCTGCCATCTCAA 2247 Query 3100 ATCTATCTGGACTGCGCCACTTCCACCGGATACTCGTACATCTGAAAACATGACTACTGG 3159 | || |||||||| || ||||| || || ||| ||| | ||||| ||| Sbjct 2248 AAACATTTGGACTGCTCCGCTTCCTCCTGAGACTGAGCTTTCTCGCCAAATGACGACTTC 2307 Query 3160 TACATCCACTATTGACATTATGGGCCTTCAAGCCGCATACGCTAAATTACATACGGAACA 3219 ||| | |||||||||||||||| || ||||| || || ||||| || ||||| || || Sbjct 2308 TACCACATCTATTGACATTATGGGTCTGCAAGCTGCTTATGCTAATTTGCATACTGACCA 2367 Query 3220 GGAACGTGATTACTTCATGACCCGTTACCGTGACATTATGAAAGAGTTCGGCGGTCATAC 3279 |||||||||||||||||| ||||||| ||| |||| || || ||| | || Sbjct 2368 AGAACGTGATTACTTCATGCAGCGTTACCATGATGTTATTTCTTCATTTGGAGGTAAAAC 2427 Query 3280 ATCCTATGATGGTGACAATCGTCCTCTTCTGCTCATGCGCTCTGAATTTTGGGCATCTGG 3339 || ||||| | |||||| |||||| | || ||||||||||| | | ||||||||||| Sbjct 2428 CTCTTATGACGCTGACAACCGTCCTTTACTTGTCATGCGCTCTAATCTCTGGGCATCTGG 2487 Query 3340 CTATGACGTAGACGGTACTGACCAATCTTCTCTCGGTCAATTCTCTGGTCGCGTTCAGCA 3399 |||||| || || || ||||||||| | || | || || || |||||||| ||||| || Sbjct 2488 CTATGATGTTGATGGAACTGACCAAACGTCGTTAGGCCAGTTTTCTGGTCGTGTTCAACA 2547 Query 3400 GACCTTCAATCACAAAGTCCCACGCTTCTATGTTCCTGAGCATCGCGTAATTATGACTCT 3459 ||||| || || || || || |||| ||||||||||||| || || | ||||| Sbjct 2548 GACCTATAAACATTCTGTGCCGCGTTTCTTTGTTCCTGAGCATGGCACTATGTTTACTCT 2607 Query 3460 GGCGGTTACTCGCTTTCCGCCTACT--CATGAAATGGAAATGCACTATCTTGTAGGTAAA 3517 ||| || ||| |||||||||||| | ||| || || || || ||| | |||| Sbjct 2608 TGCGCTTGTTCGTTTTCCGCCTACTGCGACTAAA--GAGATTCAGTACCTTAACGCTAAA 2665 Query 3518 GAAAACTTAACTTATACCGATATTGCTTGTGACCCTGCACTG-ATGGCTAACCTGCCACC 3576 | || |||||||||||||||||| | ||||||| || ||||| ||| |||| || Sbjct 2666 GGTGCTTTGACTTATACCGATATTGCTGGCGACCCTGTTTTGTATGGC-AACTTGCCGCC 2724 Query 3577 TCGTGAAGTATCCTTAAAAGAATTCTTCC--ACTCCTCACCCGATTCTGCTAAATTCAAA 3634 |||||| | || | || || | |||| || | | || ||| || || || Sbjct 2725 GCGTGAAATTTCTATGAAGGATGTTTTCCGTTCTGGTGATTCG--TCTAAGAAGTTTAAG 2782 Query 3635 ATCGCTGAGGGCCAATGGTATCGT 3658 || |||||||| || ||||||||| Sbjct 2783 ATTGCTGAGGGTCAGTGGTATCGT 2806 Score = 1245 bits (1380), Expect = 0.0 Identities = 1474/1982 (74%), Gaps = 17/1982 (1%) Strand=Plus/Plus Query 462 TAATCGAAGAATTGCAAGAATGCTATGACGTGCTCGGACAACTTGATATTAATAACACTA 521 |||| || |||||| | ||||||| | |||||| |||||||||||||||||||||| Sbjct 5008 TAATGGATGAATTGGCACAATGCTACAATGTGCTCCCCCAACTTGATATTAATAACACTA 5067 Query 522 TAGACCACAAACCCCTCGGTAATGACCATTGGAACCTCCTCTATGAAAAACCCGTATACA 581 |||||||| ||| || | || | ||| | | || || | || ||| Sbjct 5068 TAGACCACCGCCCCGAAGGGGACGAAAAATGGTTTTTAGAGAACGAGAAGACGGT-TACG 5126 Query 582 AACATTGGTATCA-GCTCGTTTCAAATCGACCCCTTAAAGATATCCGCGCCGATTACAAC 640 | || | || ||| | | | | || || ||||| ||||| |||| || || || Sbjct 5127 CAGTTTTGCCGCAAGCTGGCTGCTGAACGCCCTCTTAAGGATATTCGCGATGAGTATAAT 5186 Query 641 TATGCAAAGGCTAAGGGTGTTAAAGATGAGTGCTCAAAAATCTTGGAGGAGTCAACTATG 700 || | || || ||| |||| |||||||| |||| | | |||||| || |||||| Sbjct 5187 TACCCCAAAAAGAAAGGTATTAAGGATGAGTGTTCAAGATTGCTGGAGGCCTCCACTATG 5246 Query 701 AAGTCTCGACGTGGCTTTACCGTTCAAAGATTAATGAATGCTATGCGTACTGCCCATTCT 760 || || || | |||||| | |||| | || |||||||| ||||| || ||| || Sbjct 5247 AAATCGCGTAGAGGCTTTGCTATTCAGCGTTTGATGAATGCAATGCGACAGGCTCATGCT 5306 Query 761 AAGGGCTGGTATGTCGTATTCGATACTCTTACTCTAGCCGATGACCGCTTAAAGGATTTC 820 | || |||| | |||| || || ||||| || | || || ||||| ||| ||| || Sbjct 5307 GATGGTTGGTTTATCGTTTTTGACACTCTCACGTTGGCTGACGACCGATTAGAGGCGTTT 5366 Query 821 TATGATAATCCCAATGCTCTTCGTGACTACTTCCGTGATATTGGTCGTATGGTGCTTACT 880 |||||||||||||||||| | |||||||| || |||||||||||||||||||| ||| || Sbjct 5367 TATGATAATCCCAATGCTTTGCGTGACTATTTTCGTGATATTGGTCGTATGGTTCTTGCT 5426 Query 881 GCCGAAGGTCGCTCGGTGCATGACTCATCTTCCGACTGCTATCAGTATTTTTGTGTGCCA 940 ||||| |||||| || |||| ||| |||||||||||||||||||||||||||| Sbjct 5427 GCCGAGGGTCGCAAGGCTAATGATTCACACGCCGACTGCTATCAGTATTTTTGTGTGCCT 5486 Query 941 GAGTATGGTACACAGCACGGTCGTCTACATTTCCACGCAGTGCATCTTATGCGCACACTT 1000 |||||||||||| | || ||||| |||||||| || ||||| ||||||| |||||| Sbjct 5487 GAGTATGGTACAGCTAATGGCCGTCTTCATTTCCATGCGGTGCACTTTATGCGGACACTT 5546 Query 1001 CCTCTGGGTTCTCTGCACCCTAACTTCGGTAAGCTGGTACGCATCAATCGGCAAATAAAT 1060 ||| ||| | ||||||| || ||| | |||||||| || || ||||| Sbjct 5547 CCTACAGGTAGCGTTGACCCTAATTTTGGTCGTCGGGTACGCAATCGCCGCCAGTTAAAT 5606 Query 1061 AGCTTGCAAAACACGTGGCCTTATGGTTACTCTATGCCCATCGCAGTCCGGTACTCCCAA 1120 ||||||||||| |||||||||||||||||| ||||||||||||||| || ||| | || Sbjct 5607 AGCTTGCAAAATACGTGGCCTTATGGTTACAGTATGCCCATCGCAGTTCGCTACACGCAG 5666 Query 1121 GACGCATTCTCTCGCGCTGGCTGGCTCTGGCCTGTGGACTCAAAGGGTGAACCCCTTAAA 1180 ||||| || || || |||| ||| | |||||||| || | || ||||| || |||||| Sbjct 5667 GACGCTTTTTCACGTTCTGGTTGGTTGTGGCCTGTTGATGCTAAAGGTGAGCCGCTTAAA 5726 Query 1181 GCTACCTCGTATATGGCTGTAGGCTTCTACGTTGCTAAATACGTTAACAAAAAATCAGAT 1240 |||||| ||||||||||| || ||||| || |||||||||||||||||||| |||||| Sbjct 5727 GCTACCAGTTATATGGCTGTTGGTTTCTATGTGGCTAAATACGTTAACAAAAAGTCAGAT 5786 Query 1241 ATTGACATGGCCGTAAAAGGCCTAGGGAATAAAGAATGGAACAATTCACTCAAAACCAAA 1300 || ||| | || | ||||| ||||| ||||||||||||||| ||||| |||||||| Sbjct 5787 ATGGACCTTGCTGCTAAAGGTCTAGGAGCTAAAGAATGGAACAACTCACTAAAAACCAAG 5846 Query 1301 ATCAACCTCATACCCAAGAAAGTGTTCAGAATACGAATGTCTCGCAATTTCGGAATGAAA 1360 | || | |||||||| |||||||||| ||||| ||||| ||||| |||||| Sbjct 5847 CTGTCGCTACTTCCCAAGAAGCTGTTCAGAATCAGAATGAGCCGCAACTTCGGGATGAAA 5906 Query 1361 CTGTTATCAATGGCTCACCTGTCAGCGGAAACCCTGATGGAACTGACCCAAGTGGGTTAC 1420 || | ||||| | | ||||| |||| | | || |||| ||| | |||||||| Sbjct 5907 ATGCTCACAATGACAAATCTGTCCACGGAGTGCTTAATCCAACTTACCAAGCTGGGTTAC 5966 Query 1421 GACGTGACCCCGTTCAACAACATCTTGAAGCAGAACGCCAAGAAAGAGCTCAAATCGAGG 1480 |||| ||| ||||||||| | || |||||||||||||| || | |||| | | || |||| Sbjct 5967 GACGCGACGCCGTTCAACCAGATATTGAAGCAGAACGCAAAAAGAGAGATGAGATTGAGG 6026 Query 1481 CTGGCAAAGAAATCTGTCGCCGACGTTTTGGAGGCGCAACCTGTGACGACGAATCTGCTA 1540 |||| ||| |||| ||||||||||||| |||||||||||||||||| |||||||| Sbjct 6027 CTGGGAAAAGTTACTGTAGCCGACGTTTTGGCGGCGCAACCTGTGACGACAAATCTGCTC 6086 Query 1541 AAATTCATGCGCAATTTGACCCGAACAATCGGAGCGTCCAACCTACAGAGTTTTATCGCT 1600 ||||| |||||| || || || || || | |||||||| ||||||||||||||| Sbjct 6087 AAATTTATGCGCGCTTCGATAAAAATGATTGGCGTATCCAACCTGCAGAGTTTTATCGCT 6146 Query 1601 TCAATGACCACGAAATTAACAAGTACGGATATTTCTGATGAAACCAAAAACTACGTTGCT 1660 || ||||| ||| |||||| | |||||||||||||||| | ||||| || ||| | Sbjct 6147 TCCATGACGCAGAAGTTAACACTTTCGGATATTTCTGATGAGTCGAAAAATTATCTTGAT 6206 Query 1661 TCTGCAGGAATTGCTGTTGCTAACTTACGAATTAAATCGAAGTGGACTGCTGGTGGAAAA 1720 ||||||||| || |||| ||||||||||||||||||||||||||||| |||||| Sbjct 6207 AAAGCAGGAATTACTACTGCTTGTTTACGAATTAAATCGAAGTGGACTGCTGGCGGAAAA 6266 Query 1721 TGAGGAAATTCAATCTCAACTTAAAAAACTCGAGGTCGTCTTACTTTGCAACCTTTCGCC 1780 |||| |||||| | || ||| | |||||| ||||||||||| |||||||||| Sbjct 6267 TGAGAAAATTCGACCTATCCTTGCGCAGCTCGAGAAGCTCTTACTTTGCGACCTTTCGCC 6326 Query 1781 ATCATCTCAACG-TGCTGGCAAAAACTGACGCCCTTGACGAGGAGAAATACTTAAATATG 1839 |||| || |||| | ||| ||||||||||||| | || |||||||| | | |||||| Sbjct 6327 ATCAACT-AACGATTCTGTCAAAAACTGACGCGTTGGATGAGGAGAAGTGGCTTAATATG 6385 Query 1840 TTAGGTGCTCTCCTCAAGGACTGGTTCCGGTACGAAGAACATTTCGTGCATGGTAAACAA 1899 | || | || ||||||||||||| | || || |||||| || ||||||| | | Sbjct 6386 CTTGGCACGTTCGTCAAGGACTGGTTTAGATATGAGTCACATTTTGTTCATGGTAGAGAT 6445 Query 1900 TCAATGCTTGACATACTGAAAGAACGTGGCCTATTATCCACATCGTCAACTGACACAAAC 1959 || | ||||||| | ||||| ||||| || |||| || ||| ||| Sbjct 6446 TCTCTTGTTGACATTTTAAAAGAGCGTGGATTACTATCTGAGTCCGATGCTG--TTCAAC 6503 Query 1960 CAC--AAAGGAAACTGAAATGTCTAAATCAA---AC-GAATCTGCTGTAGCCTTTCAAAC 2013 ||| | ||| || ||||| | | |||| || ||| | ||| || || || Sbjct 6504 CACTAATAGGTAA--GAAAT-CATGAGTCAAGTTACTGAACAATCCGTACGTTTCCAGAC 6560 Query 2014 TGCTATCGCTTCTATCAAACTTATTCAAGCATCTTCTGTTCTTGACTTGACAGAGGACGA 2073 ||| | || ||||| || || ||||| || ||| | ||| | || || || || || || Sbjct 6561 CGCTTTGGCCTCTATTAAGCTCATTCAGGCTTCTGCCGTTTTGGATTTAACCGAAGATGA 6620 Query 2074 TTTTGACTTCTTAACTCGCGACCGTGTCTGGATTGCTACCGACCGTTCACGCGCTCGCCG 2133 ||| || || | || | || || ||||||||||| ||||| || || ||||| || Sbjct 6621 TTTCGATTTTCTGACGAGTAACAAAGTTTGGATTGCTACTGACCGCTCTCGTGCTCGTCG 6680 Query 2134 -TGCTATCGAGGCTTGCGTATATGGAACACTGGACTTTGTCGGGTATCCTCGCTTTCCTG 2192 ||| | ||||||||||| ||||| || ||||||||||| || || ||||||||||||| Sbjct 6681 CTGC-GTTGAGGCTTGCGTTTATGGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTG 6739 Query 2193 CTCCTGTTGAGTTTATTTCTGCCGTCATTGCTTATTACGTTCATCCCGTTAACATCCAAA 2252 ||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||| |||| Sbjct 6740 CTCCTGTTGAGTTTATTGCTGCCGTCATTGCTTATTATGTTCATCCCGTCAACATTCAAA 6799 Query 2253 CCGCCTGTCTCATCATGGAAGGTGCTGAGTTTACCGAAAACATCGTCAATGGTGTTGAAC 2312 | |||||||||||||||||||| ||||| ||||| |||||||| | ||||| || || | Sbjct 6800 CGGCCTGTCTCATCATGGAAGGCGCTGAATTTACGGAAAACATTATTAATGGCGTCGAGC 6859 Query 2313 GCCCCGTTAAAGCCTCTGAACTGTTCGCCTTCACTCTTCTTGTTCGCGCCGGAAACAAAG 2372 | || ||||||||| ||||| ||||||| || || | | ||| ||||| ||||||| | Sbjct 6860 GTCCGGTTAAAGCCGCTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAACACTG 6919 Query 2373 ATCTTATCGGTCACGCTGAAACAAACATCCGTGAACAGTTACGCGCTCAAGGTGTCATGT 2432 | || | | |||| ||| |||| | ||| || | ||||| || |||| || |||| Sbjct 6920 ACGTTCTTACTGACGCAGAAGAAAACGTGCGTCAAAAATTACGTGCAGAAGGAGTGATGT 6979 Query 2433 AA 2434 || Sbjct 6980 AA 6981 Score = 163 bits (180), Expect = 1e-36 Identities = 176/233 (76%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 5095 ACATCACGCGAAAATACTAAGGATACTGTCTATGCTCAAAATGAAATGCTCGCGTATAAC 5154 || |||||| | ||||| || || || ||||| |||||||| ||||| || ||| | Sbjct 4224 ACTTCACGCCAGAATACGAAAGACCAGGTATATGCACAAAATGAGATGCTTGCTTATCAA 4283 Query 5155 CAAAAAGAGTCTATGTCACGCGTTGGCGCTATTCTCGAAAACACAAGCCTCACCAAACAG 5214 || || ||||||| | ||||||| ||||| | |||||||| | || |||| || Sbjct 4284 CAGAAGGAGTCTACTGCTCGCGTTGCGTCTATTATGGAAAACACCAATCTTTCCAAGCAA 4343 Query 5215 CAACAAACTTCTGAAATTATGCGGCAAATGCTTACTCAGGCTCAAACCGCAGGTCAATAT 5274 || || ||| || |||||||| |||||||||||||| |||||||| || ||||| ||| Sbjct 4344 CAGCAGGTTTCCGAGATTATGCGCCAAATGCTTACTCAAGCTCAAACGGCTGGTCAGTAT 4403 Query 5275 TTTACAAATGACCAAATCAAGGAGCTTACGAGAAAAGTTGGTGCTGATATTGA 5327 ||||| |||||||||||||| || | || | || ||| ||||||| |||| Sbjct 4404 TTTACCAATGACCAAATCAAAGAAATGACTCGCAAGGTTAGTGCTGAGGTTGA 4456 Score = 154 bits (170), Expect = 5e-34 Identities = 325/482 (67%), Gaps = 17/482 (4%) Strand=Plus/Plus Query 4563 TATGTTTGGCTCTATCGCTGGCGGTATCGCCTCCGCACTTGCCGGAGGCCTTATGGGTAA 4622 ||||||||| |||| ||||||||||| || || || ||||| || ||| ||| ||| Sbjct 3677 TATGTTTGGTGCTATTGCTGGCGGTATTGCTTCTGCTCTTGCTGGTGGCGCCATGTCTAA 3736 Query 4623 ATTATTTGGCGGCGGTCAGTCCGCCGACTCTACCGGAATCCAAGGCAACGTCCTTGCTTC 4682 ||| ||||| |||||||| |||| ||| || || ||||| | || |||||| | Sbjct 3737 ATTGTTTGGAGGCGGTCAAAAAGCCGCCTCCGGTGGCATTCAAGGTGATGTGCTTGCTAC 3796 Query 4683 CGACAACAATGTTGTAGGTGCTAATGATGCTGGTATTAAATCTGCTATTCAGGGCTCTAC 4742 ||| |||||| |||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 3797 CGATAACAATACTGTAGGCATGGGTGATGCTGGTATTAAATCTGCCATTCAAGGCTCTAA 3856 Query 4743 TGTCCCTAACTCTCAGGAAGCTGCTCCCT-CTGCTATCTCTGGCATCCTTGCCGACTCTG 4801 ||| |||||| || | || || | ||||| | | | ||||| | || | ||| Sbjct 3857 TGTTCCTAACCCTGATGAGGCCG-TCCCTAGTTTTGTTTCTGGTGCTATGGCTAAAGCTG 3915 Query 4802 G-CAAGCA-----------TGCGCTCTCGTCTCTTACCAATGCTGGTGCAAATAAACTCA 4849 | ||| | | || | | || || ||| | | | |||| | Sbjct 3916 GTAAAGGACTTCTTGAAGGTACGTTGCAGGCTGGCACTTCTGCCGTTTCTGATAAGTTGC 3975 Query 4850 TGGAGGCTGTCGGCCTTTCT---AAGTCTGCCTCTGACAAGGGCAAGGACACAAAAGACT 4906 | || || || ||| | ||||||||| |||| || || ||||| || || | Sbjct 3976 TTGATTTGGTTGGACTTGGTGGCAAGTCTGCCGCTGATAAAGGAAAGGATACTCGTGATT 4035 Query 4907 ATCTCGCCGCCGCATTCCCCGAGCTCAACCCATGGGAACGTGCTGGTGCTGGCGCTTCTA 4966 |||| || || ||||| || ||||| || | ||||| ||||||||||||| ||||| Sbjct 4036 ATCTTGCTGCTGCATTTCCTGAGCTTAATGCTTGGGAGCGTGCTGGTGCTGATGCTTCCT 4095 Query 4967 GTCCAGGCATGCAAGACGCTGGCTTCCAAAATCAGAAGGAGCTAACCAAGATGCAGCTTG 5026 | | || ||| ||||| || || | ||||| || ||||| || || ||||| || | Sbjct 4096 CTGCTGGTATGGTTGACGCCGGATTTGAGAATCAAAAAGAGCTTACTAAAATGCAACTGG 4155 Query 5027 AC 5028 || Sbjct 4156 AC 4157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17734351507500