Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650075.1_202016-05-23] 250 sequences; 6,800,559 total letters Query= NC_007856.1 Length=5486 Score E Sequences producing significant alignments: (Bits) Value seq81 1700 0.0 >seq81 Length=7067 Score = 1700 bits (1884), Expect = 0.0 Identities = 2317/3205 (72%), Gaps = 125/3205 (4%) Strand=Plus/Plus Query 848 CGTGACTATTTCCGTGATATTGGCCGTATGGTTCTCACTGCCGAGGGTCGTTCGGTCCAT 907 ||||||||||| ||||||||||| ||||||||||| ||||||||||||| || || Sbjct 2 CGTGACTATTTTCGTGATATTGGTCGTATGGTTCTTGCTGCCGAGGGTCGCAAGGCTAAT 61 Query 908 GATTCATCTTCGGACTGCTATCAGTACTTTTGTGTGCCTGAGTATGGCACCCAGC--ATG 965 |||||| | |||||||||||||| |||||||||||||||||||| | |||| ||| Sbjct 62 GATTCACACGCCGACTGCTATCAGTATTTTTGTGTGCCTGAGTATGGTA--CAGCTAATG 119 Query 966 GCCGTTTACACTTTCACGCAGTGCATCTTATGCGCACACTTCCTTTGGGTTCTCTCGACC 1025 ||||| | || || || || ||||| ||||||| ||||||||| ||| | |||| Sbjct 120 GCCGTCTTCATTTCCATGCGGTGCACTTTATGCGGACACTTCCTACAGGTAGCGTTGACC 179 Query 1026 CTAACTTTGGTAAGCTGGTGCGTACTAATCGGCAAATAAATAGCTTGCAAAACACATGGC 1085 |||| |||||| | ||| || | | || || |||||||||||||||| || |||| Sbjct 180 CTAATTTTGGTCGTCGGGTACGCAATCGCCGCCAGTTAAATAGCTTGCAAAATACGTGGC 239 Query 1086 CTTATGGTTACTCTATGCCCATCGCAGTCCGGTATTCTCAGGATGCTTTCTCTCGCGCTG 1145 ||||||||||| ||||||||||||||| || || | ||||| ||||| || || ||| Sbjct 240 CTTATGGTTACAGTATGCCCATCGCAGTTCGCTACACGCAGGACGCTTTTTCACGTTCTG 299 Query 1146 GATGGCTCTGGCCTGTCGATACAAAGGGTGAACCCCTTAAATCCACCTCGTATATGGCTG 1205 | ||| | |||||||| ||| | || ||||| || |||||| | ||| |||||||||| Sbjct 300 GTTGGTTGTGGCCTGTTGATGCTAAAGGTGAGCCGCTTAAAGCTACCAGTTATATGGCTG 359 Query 1206 TAGGCTTCTACGTTGCTAAATACGTTAATAAAAAATCTGATGTTGACATAGCCGCAAAAG 1265 | || ||||| || |||||||||||||| ||||| || ||| | ||| | || || |||| Sbjct 360 TTGGTTTCTATGTGGCTAAATACGTTAACAAAAAGTCAGATATGGACCTTGCTGCTAAAG 419 Query 1266 GCTTAGGGAATCAAAAATGGAACGCTACATTAAAAACGCAGATGGCTCTTTTACCAAAGA 1325 | |||| | || |||||||| || ||||||| || || | || | || |||| Sbjct 420 GTCTAGGAGCTAAAGAATGGAACAACTCACTAAAAACCAAGCTGTCGCTACTTCCCAAGA 479 Query 1326 AACTATTTCGAATTCGAATGAGCCGCAACTTCGGGATGAAACTACTCCCAATGACGACGC 1385 | || || |||| |||||||||||||||||||||||||| | ||| ||||||| | | Sbjct 480 AGCTGTTCAGAATCAGAATGAGCCGCAACTTCGGGATGAAAATGCTCACAATGACAAATC 539 Query 1386 TGACCGCGGAGTGTTTAATCCAACTGACCCAAGTGGGTTACGACGTGACCCCGTTCAACA 1445 || || ||||||| ||||||||||| ||| | |||||||||||| ||| ||||||||| Sbjct 540 TGTCCACGGAGTGCTTAATCCAACTTACCAAGCTGGGTTACGACGCGACGCCGTTCAACC 599 Query 1446 ACATCTTGAAGCAGAACGCCAAGAAAGAGCTACGATTGAGGCTGGCAAAGCAATCTGTAG 1505 | || |||||||||||||| || | |||| | |||||||||||| ||| |||||| Sbjct 600 AGATATTGAAGCAGAACGCAAAAAGAGAGATGAGATTGAGGCTGGGAAAAGTTACTGTAG 659 Query 1506 CCGACGTTTTGGAGGCGCAACCTGTGACGACCAATCTGCTAAAATTCATGCGCAATTTGA 1565 |||||||||||| |||||||||||||||||| |||||||| ||||| |||||| || || Sbjct 660 CCGACGTTTTGGCGGCGCAACCTGTGACGACAAATCTGCTCAAATTTATGCGCGCTTCGA 719 Query 1566 CCCGAACAATCGGAGCGTCCAGCCTACAGAGTTTTATCGCTTCAATGACGCAGAAATTAG 1625 || || || | |||| ||| ||||||||||||||||| ||||||||||| ||| Sbjct 720 TAAAAATGATTGGCGTATCCAACCTGCAGAGTTTTATCGCTTCCATGACGCAGAAGTTAA 779 Query 1626 CAAATACGGATATTTCTGATGAAACTAAAAACTACGTTACTAATGCAGGAATTGCTGTTG 1685 || | |||||||||||||||| | ||||| || || ||| ||||||||| || || Sbjct 780 CACTTTCGGATATTTCTGATGAGTCGAAAAATTATCTTGATAAAGCAGGAATTACTACTG 839 Query 1686 CTGACTTACGACTTAAATCGAAGTGGACTGCTGGTGGAAAATGAAGAACTTCAATCTCAA 1745 || |||||| |||||||||||||||||||||| ||||||||| || ||| | || Sbjct 840 CTTGTTTACGAATTAAATCGAAGTGGACTGCTGGCGGAAAATGAGAAAATTCGACCTATC 899 Query 1746 CTTAAAGAACTCGAGGGCGTCTTACTTCGCAACCTTTCGCCATCATCTCAACG-TGGTAG 1804 ||| | |||||| |||||||| || |||||||||||||| || |||| | | Sbjct 900 CTTGCGCAGCTCGAGAAGCTCTTACTTTGCGACCTTTCGCCATCAACT-AACGATTCTGT 958 Query 1805 CAAAGACTGACGCGCTTGATGAAGAAAAATGGCTCAATATGATGGGCGCTCTTCTTAAGG 1864 |||| ||||||||| | ||||| || || ||||| |||||| | ||| | | | |||| Sbjct 959 CAAAAACTGACGCGTTGGATGAGGAGAAGTGGCTTAATATGCTTGGCACGTTCGTCAAGG 1018 Query 1865 ACTGGTTCCGCTATGAACAACATTTCGTACATGGCAAAGAATCAATGCTTGACATTCTAA 1924 ||||||| | ||||| |||||| || ||||| | ||| || | |||||||| ||| Sbjct 1019 ACTGGTTTAGATATGAGTCACATTTTGTTCATGGTAGAGATTCTCTTGTTGACATTTTAA 1078 Query 1925 ATGAACGTGGCCTATTATCCACCTTGCCAAATG--GCTTAAC--TTACAAAGGAATCAAA 1980 | || ||||| || ||| | | | ||| | | ||| || | | || || Sbjct 1079 AAGAGCGTGGATTACTAT---CTGAGTCCGATGCTGTTCAACCACTAATAGGTAAGAAAT 1135 Query 1981 AATGA---AAGCAAATGAGAACGCAGTAGCCTTTCAAACCGCTATTGCCTCCATCAAACT 2037 |||| ||| | ||| | | ||| || || |||||| | ||||| || || || Sbjct 1136 CATGAGTCAAGTTACTGAACAATCCGTACGTTTCCAGACCGCTTTGGCCTCTATTAAGCT 1195 Query 2038 TATTCAGGCATCTTCTGTTCTTGACCTGACTGAGGACGATTTCGAATTCTTAACTCGTGA 2097 |||||||| ||| | ||| | || | || || || |||||||| || | || || | Sbjct 1196 CATTCAGGCTTCTGCCGTTTTGGATTTAACCGAAGATGATTTCGATTTTCTGACGAGTAA 1255 Query 2098 CCGTGTATGGATTGCAACTGACCGCTCCCGTGCTCGCCGCGCTATTGAGGCTTGCGTTTA 2157 | || |||||||| ||||||||||| |||||||| ||| |||||||||||||||| Sbjct 1256 CAAAGTTTGGATTGCTACTGACCGCTCTCGTGCTCGTCGCTGCGTTGAGGCTTGCGTTTA 1315 Query 2158 TGGAACTCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTCCTATTGAGTTTATTGCTGC 2217 ||| || ||||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct 1316 TGGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTCCTGTTGAGTTTATTGCTGC 1375 Query 2218 CGTCATTGCTTATTATGTTCATCCCGTTAACATTCAAACGGCATGTCTTATTATGGAAGG 2277 ||||||||||||||||||||||||||| |||||||||||||| ||||| || |||||||| Sbjct 1376 CGTCATTGCTTATTATGTTCATCCCGTCAACATTCAAACGGCCTGTCTCATCATGGAAGG 1435 Query 2278 CGCTGAATTCACCGAAAACATCATTAATGGTGTCGATGCCCCGGTTAAAGCCGCTGAACT 2337 ||||||||| || |||||||| |||||||| ||||| |||||||||||||||||| | Sbjct 1436 CGCTGAATTTACGGAAAACATTATTAATGGCGTCGAGCGTCCGGTTAAAGCCGCTGAATT 1495 Query 2338 CTTCGCGTTTACCTTGCGTGTACGCGCCGGAAACACTGAGCTTATTACTTACGCAGAAAA 2397 |||||||||||||||||||||||||| ||||||||||| || ||||| |||||||| | Sbjct 1496 GTTCGCGTTTACCTTGCGTGTACGCGCAGGAAACACTGACGTTCTTACTGACGCAGAAGA 1555 Query 2398 CAATGCGCGTGAAAAACTGCGCGCTCAAGGAGTGATG-GATGTC------TAAAAAATCT 2450 || | |||| ||||| | || || ||||||||||| ||||| ||||||| | Sbjct 1556 AAACGTGCGTCAAAAATTACGTGCAGAAGGAGTGATGTAATGTCTAAAGGTAAAAAACGT 1615 Query 2451 ATTCGC---CGCTCTGGT---------------------------GGCAAATCTAAAGGT 2480 | || ||| ||||| ||||| |||||| Sbjct 1616 TCTGGCGCTCGCCCTGGTCGTCCGCAGCCGTTGCGAGGTACTAAAGGCAAGCGTAAAGGC 1675 Query 2481 GCTCGCCTCTGGTATGTTGGCGGCACACAATTCTAATCTCTAAGGGGCTTCGGCCCCTCT 2540 ||||| || |||||||| || || |||||| |||| | |||||||||||||||| | Sbjct 1676 GCTCGTCTTTGGTATGTAGGTGGTCAACAATTTTAATTGC--AGGGGCTTCGGCCCCT-T 1732 Query 2541 ATTTAAGGATACAAAATGTCTAACGTACAAACTTCCGCTGAACGTATTCCGCATGACCTC 2600 | || |||||| | |||||||| | |||||| ||| || ||||| ||||||||||| Sbjct 1733 ACTTGAGGATAAATTATGTCTAATATTCAAACTGGCGCCGAGCGTATGCCGCATGACCTT 1792 Query 2601 TCACATCTGGTATTCGAAGCTGGTAAAATCGGACGCCTTAAAACTATCTCCTGGACTCCT 2660 || ||||| | ||| |||||| | || || || |||| || || || ||||| Sbjct 1793 TCCCATCTTGGCTTCCTTGCTGGTCAGATTGGTCGTCTTATTACCATTTCAACTACTCCG 1852 Query 2661 GTTGTCGCTGGTGATTCTTACGAAACTGAAATGGTAGGCGCTATTCGTCTTTCTCCTCTC 2720 ||| ||||||| || || | ||| | || || |||||| | ||||||||||| | Sbjct 1853 GTTATCGCTGGCGACTCCTTCGAGATGGACGCCGTTGGCGCTCTCCGTCTTTCTCCATTG 1912 Query 2721 CGTCGTGGTCTGGCTGTCGACTCTCGCGTCGACGTCTTTACTTTCTATATCCCTCATCGT 2780 |||||||| || ||| | |||||| || ||| | |||||||| ||| ||||||||||| Sbjct 1913 CGTCGTGGCCTTGCTATTGACTCTACTGTAGACATTTTTACTTTTTATGTCCCTCATCGT 1972 Query 2781 CATGTCTATGGTCAACAATGGATTGACTTTATGAAGACTGGCGTTAACGCTACTCCTCTG 2840 || || |||||| |||| |||||| | || |||||| ||| ||||| || |||||||| Sbjct 1973 CACGTTTATGGTGAACAGTGGATTAAGTTCATGAAGGATGGTGTTAATGCCACTCCTCTC 2032 Query 2841 GC-TCCGGTAACTTGTTCCTCTGGCT---GGGATTCTGCTGCCTATCTTGGCAC---TAT 2893 | | | |||| | |||| | || ||| || | ||||||||| || Sbjct 2033 CCGACTGTTAAC----ACTACTGGTTATATTGACCATGCCGCTTTTCTTGGCACGATTAA 2088 Query 2894 CCCGTCAACTAATTTGAAGGTTCCTAA--ATTCCTTCATCAATCTTATCTCAATATTTAC 2951 ||| || ||| || | ||||| ||| || ||| |||| | ||||| || Sbjct 2089 CCCTGATACCAAT---AAAATCCCTAAGCATTTGTT--TCAGGGTTATTTGAATATCTAT 2143 Query 2952 AACAACTACTTTAAGCCGCCGTGGTCTAATGACCTCACCTATGCTAACCCATCTAATATG 3011 |||||||| ||||| |||||||| ||||| ||| | ||||||| ||||| | Sbjct 2144 AACAACTATTTTAAAGCGCCGTGGATGCCTGACCGTACCGAGGCTAACC---CTAATGAG 2200 Query 3012 CCCGCTGAGGAT--TACAAATGGGGCGTTC--GTGTCGCTAACTTAAAATCTATCTGGAC 3067 | | | ||| | | | | ||| || || | || |||| | || ||||| Sbjct 2201 CTTAATCAAGATGATGCTCGTTATGGTTTCCGTTGCTGCCATCTCAAAAAC-ATTTGGAC 2259 Query 3068 CGCGCCCCTTCCTCCTGATTCATTAAC-TAAGCAGGATATGACTACTGGCGCTACCA--- 3123 || || ||||||||||| | | | | | | | ||||| ||| |||||| Sbjct 2260 TGCTCCGCTTCCTCCTGAGAC-TGAGCTTTCTCGCCAAATGACGACT---TCTACCACAT 2315 Query 3124 CTATCGATATTATGGGCCTACAAGCTGCCTATGCTAAACTCCACACTGAACAGGAACGTG 3183 |||| || |||||||| || |||||||| |||||||| | || ||||| || ||||||| Sbjct 2316 CTATTGACATTATGGGTCTGCAAGCTGCTTATGCTAATTTGCATACTGACCAAGAACGTG 2375 Query 3184 ACTATTTCATGACTCGCTACCGCGATATTATGAAAGACTTTGGCGGTCACACCTCCTACG 3243 | || |||||| || |||| ||| |||| ||||| ||| | ||||| || | Sbjct 2376 ATTACTTCATGCAGCGTTACCATGATGTTATTTCTTCATTTGGAGGTAAAACCTCTTATG 2435 Query 3244 ACGGTGATAACCGTCCTCTGCTCCTGATGCGCTCTGAATTTTGGGCCTCTGGCTATGACG 3303 ||| ||| ||||||||| | || | ||||||||| | | ||||| ||||||||||| | Sbjct 2436 ACGCTGACAACCGTCCTTTACTTGTCATGCGCTCTAATCTCTGGGCATCTGGCTATGATG 2495 Query 3304 TCGACGGTACTGACCAAACTTCATTGGGTCAGTTCTCTGGTCGCGTCCAACAAACCTTTA 3363 | || || ||||||||||| || || || ||||| |||||||| || ||||| |||| || Sbjct 2496 TTGATGGAACTGACCAAACGTCGTTAGGCCAGTTTTCTGGTCGTGTTCAACAGACCTATA 2555 Query 3364 ATCATAAAGTGCCTCGCTTCTATGTTCCTGAGCATGGCGTAATTATGACTTTATCTGTTA 3423 | ||| ||||| || |||| |||||||||||||||| || | ||| | | || Sbjct 2556 AACATTCTGTGCCGCGTTTCTTTGTTCCTGAGCATGGCACTATGTTTACTCTTGCGCTTG 2615 Query 3424 CTCGCTTCCCTCCTACT--CACGAAATGGAAATGCACTATCTCGTCGGTAAGGAATCTCT 3481 ||| || || |||||| || ||| || || || || || || ||| | || | Sbjct 2616 TTCGTTTTCCGCCTACTGCGACTAAA--GAGATTCAGTACCTTAACGCTAAAGGTGCTTT 2673 Query 3482 GACTTATACTGACATTGCCTGTGACCCTGCTCT-TATGGCTAACCTGCCTCCGCGTGAAA 3540 ||||||||| || ||||| | ||||||| | | |||||| ||| |||| |||||||||| Sbjct 2674 GACTTATACCGATATTGCTGGCGACCCTGTTTTGTATGGC-AACTTGCCGCCGCGTGAAA 2732 Query 3541 TTGAGGTAAAAGACCTCTTTCACTCTGCTGGT---ACTGGTAAATTCAAAATTGCCGAAG 3597 || | || || | || | |||| || | || || || || ||||| || | Sbjct 2733 TTTCTATGAAGGATGTTTTCCGTTCTGGTGATTCGTCTAAGAAGTTTAAGATTGCTGAGG 2792 Query 3598 GTCAATGGTATCGTACTCAGCCTGACCGCGTTGCCTTCC--CTTATAACGCTCTTGACGG 3655 |||| ||||||||| | |||| ||| | ||| ||||| || |||||| || Sbjct 2793 GTCAGTGGTATCGTTATGCGCCTTCGTATGTTTC--TCCTGCTTATCACCTTCTTGAAGG 2850 Query 3656 CTTCCCTTTCTATTC-TGAACTGCCGTCTAATGATATTCTCGAACGTGTACTTGTTCGAA 3714 |||||| ||| |||| |||| ||| ||| |||| | | ||||| |||||| |||| Sbjct 2851 CTTCCCATTC-ATTCAGGAACCGCCTTCTGGTGATTTGCAAGAACGCGTACTTATTCGCC 2909 Query 3715 CTGATAACTATGATGAAATCTTCCAGTCTATGCAACTTGCACACTGGAACATGCAAACTA 3774 || | ||||| | |||||||| | || | || ||||| | || || Sbjct 2910 ACCATGATTATGACCAGTGTTTCCAGTCCGTTCAGTTGTTGCAGTGGAATAGTCAGGTTA 2969 Query 3775 AATTTAACACTACTGTATATCGTCATATGCCTACCACTCGTGATGGCATCATGA---CGT 3831 ||||||| || || ||||| || |||| |||||||| ||| ||||||| ||| Sbjct 2970 AATTTAATGTGACCGTTTATCGCAATCTGCCGACCACTCGCGATTCAATCATGACTTCGT 3029 Query 3832 CATAAAA---------------CAAAACGTTGAACGGGTACAAATTTTAATTTGTGCCTG 3876 |||||| | |||| ||| |||| |||||||||||| |||| Sbjct 3030 GATAAAAGATTGAGTGTGAGGTTATAACGCCGAAGCGGTAAAAATTTTAATTTTTGCCGC 3089 Query 3877 TTCAAGGTTGAACAAGCGAAGCGCGTTAGCTAACTTACTTAAGGAAATT-CTCATGTTTC 3935 | |||||| ||||||||||||| ||| | | ||| |||| || ||||||||| Sbjct 3090 TGAGGGGTTGACCAAGCGAAGCGCGGTAGGTTTTCTGCTT-AGGAGTTTAATCATGTTTC 3148 Query 3936 AAACTTATCTCTCTAAACATAATTC 3960 | |||| | | ||| |||||||| Sbjct 3149 AGACTTTTATTTCTCGCCATAATTC 3173 Score = 1368 bits (1516), Expect = 0.0 Identities = 1507/1994 (76%), Gaps = 29/1994 (1%) Strand=Plus/Plus Query 468 TAATCGAAGAGTTAGACGAATGCTACAACGTGCTCGGACAACTTGATATTAATAACACTA 527 |||| || || || | |||||||||| |||||| |||||||||||||||||||||| Sbjct 5008 TAATGGATGAATTGGCACAATGCTACAATGTGCTCCCCCAACTTGATATTAATAACACTA 5067 Query 528 TAGACCACAAACCTATCGGTAACGCCAAATGGGACTTAATGTATGAAAAACCTGTCTATA 587 |||||||| || || ||| |||||| ||| | | || || | || Sbjct 5068 TAGACCACCGCCCCGAAGGGGACGAAAAATGGTTTTTAGAGAACGAGAAGACGGTT---- 5123 Query 588 AACACTGGTATG-----AACTGGTATCAAAACGACCCCTTAAATCAATCAGAGAGGACTA 642 || | | | || | |||| | |||| || ||||| || | || || || Sbjct 5124 -ACGCAGTTTTGCCGCAAGCTGGCTGCTGAACGCCCTCTTAAGGATATTCGCGATGAGTA 5182 Query 643 CAACTATGCAAAGGCTAAGGGTACTAAAGATGAGTGCTCGAAAATCCTTGAGGAATCCAC 702 || || | || || |||| ||| |||||||| || | | | || |||| ||||| Sbjct 5183 TAATTACCCCAAAAAGAAAGGTATTAAGGATGAGTGTTCAAGATTGCTGGAGGCCTCCAC 5242 Query 703 CATGAAATCCCGCCGTGGCTTTACCGTTCAGAGATTGATGAATGCTATGCGTACTGCCCA 762 |||||||| || | |||||| | ||||| | ||||||||||| ||||| || || Sbjct 5243 TATGAAATCGCGTAGAGGCTTTGCTATTCAGCGTTTGATGAATGCAATGCGACAGGCTCA 5302 Query 763 CACTGATGGCTGGTATGTTGTATTCGATACTCTCACCTTAGCTGATGATCGTATTA-AGG 821 ||||||| |||| | | || || || |||||||| || ||||| || || |||| ||| Sbjct 5303 TGCTGATGGTTGGTTTATCGTTTTTGACACTCTCACGTTGGCTGACGACCG-ATTAGAGG 5361 Query 822 ACTTCTATGCTAACCCCAATGCTCTTCGTGACTATTTCCGTGATATTGGCCGTATGGTTC 881 || |||| ||| ||||||||| | ||||||||||| ||||||||||| |||||||||| Sbjct 5362 CGTTTTATGATAATCCCAATGCTTTGCGTGACTATTTTCGTGATATTGGTCGTATGGTTC 5421 Query 882 TCACTGCCGAGGGTCGTTCGGTCCATGATTCATCTTCGGACTGCTATCAGTACTTTTGTG 941 | ||||||||||||| || |||||||| | |||||||||||||| ||||||| Sbjct 5422 TTGCTGCCGAGGGTCGCAAGGCTAATGATTCACACGCCGACTGCTATCAGTATTTTTGTG 5481 Query 942 TGCCTGAGTATGGCACCCAGC--ATGGCCGTTTACACTTTCACGCAGTGCATCTTATGCG 999 ||||||||||||| | |||| |||||||| | || || || || ||||| ||||||| Sbjct 5482 TGCCTGAGTATGGTA--CAGCTAATGGCCGTCTTCATTTCCATGCGGTGCACTTTATGCG 5539 Query 1000 CACACTTCCTTTGGGTTCTCTCGACCCTAACTTTGGTAAGCTGGTGCGTACTAATCGGCA 1059 ||||||||| ||| | |||||||| |||||| | ||| || | | || || Sbjct 5540 GACACTTCCTACAGGTAGCGTTGACCCTAATTTTGGTCGTCGGGTACGCAATCGCCGCCA 5599 Query 1060 AATAAATAGCTTGCAAAACACATGGCCTTATGGTTACTCTATGCCCATCGCAGTCCGGTA 1119 |||||||||||||||| || ||||||||||||||| ||||||||||||||| || || Sbjct 5600 GTTAAATAGCTTGCAAAATACGTGGCCTTATGGTTACAGTATGCCCATCGCAGTTCGCTA 5659 Query 1120 TTCTCAGGATGCTTTCTCTCGCGCTGGATGGCTCTGGCCTGTCGATACAAAGGGTGAACC 1179 | ||||| ||||| || || |||| ||| | |||||||| ||| | || ||||| || Sbjct 5660 CACGCAGGACGCTTTTTCACGTTCTGGTTGGTTGTGGCCTGTTGATGCTAAAGGTGAGCC 5719 Query 1180 CCTTAAATCCACCTCGTATATGGCTGTAGGCTTCTACGTTGCTAAATACGTTAATAAAAA 1239 |||||| | ||| ||||||||||| || ||||| || |||||||||||||| ||||| Sbjct 5720 GCTTAAAGCTACCAGTTATATGGCTGTTGGTTTCTATGTGGCTAAATACGTTAACAAAAA 5779 Query 1240 ATCTGATGTTGACATAGCCGCAAAAGGCTTAGGGAATCAAAAATGGAACGCTACATTAAA 1299 || ||| | ||| | || || ||||| |||| | || |||||||| || |||| Sbjct 5780 GTCAGATATGGACCTTGCTGCTAAAGGTCTAGGAGCTAAAGAATGGAACAACTCACTAAA 5839 Query 1300 AACGCAGATGGCTCTTTTACCAAAGAAACTATTTCGAATTCGAATGAGCCGCAACTTCGG 1359 ||| || || | || | || ||||| || || |||| ||||||||||||||||||| Sbjct 5840 AACCAAGCTGTCGCTACTTCCCAAGAAGCTGTTCAGAATCAGAATGAGCCGCAACTTCGG 5899 Query 1360 GATGAAACTACTCCCAATGACGACGCTGACCGCGGAGTGTTTAATCCAACTGACCCAAGT 1419 ||||||| | ||| ||||||| | ||| || ||||||| ||||||||||| ||| | | Sbjct 5900 GATGAAAATGCTCACAATGACAAATCTGTCCACGGAGTGCTTAATCCAACTTACCAAGCT 5959 Query 1420 GGGTTACGACGTGACCCCGTTCAACAACATCTTGAAGCAGAACGCCAAGAAAGAGCTACG 1479 ||||||||||| ||| ||||||||| | || |||||||||||||| || | |||| | | Sbjct 5960 GGGTTACGACGCGACGCCGTTCAACCAGATATTGAAGCAGAACGCAAAAAGAGAGATGAG 6019 Query 1480 ATTGAGGCTGGCAAAGCAATCTGTAGCCGACGTTTTGGAGGCGCAACCTGTGACGACCAA 1539 ||||||||||| ||| |||||||||||||||||| |||||||||||||||||| || Sbjct 6020 ATTGAGGCTGGGAAAAGTTACTGTAGCCGACGTTTTGGCGGCGCAACCTGTGACGACAAA 6079 Query 1540 TCTGCTAAAATTCATGCGCAATTTGACCCGAACAATCGGAGCGTCCAGCCTACAGAGTTT 1599 |||||| ||||| |||||| || || || || || | |||| ||| |||||||| Sbjct 6080 TCTGCTCAAATTTATGCGCGCTTCGATAAAAATGATTGGCGTATCCAACCTGCAGAGTTT 6139 Query 1600 TATCGCTTCAATGACGCAGAAATTAGCAAATACGGATATTTCTGATGAAACTAAAAACTA 1659 ||||||||| ||||||||||| ||| || | |||||||||||||||| | ||||| || Sbjct 6140 TATCGCTTCCATGACGCAGAAGTTAACACTTTCGGATATTTCTGATGAGTCGAAAAATTA 6199 Query 1660 CGTTACTAATGCAGGAATTGCTGTTGCTGACTTACGACTTAAATCGAAGTGGACTGCTGG 1719 || ||| ||||||||| || |||| |||||| |||||||||||||||||||||| Sbjct 6200 TCTTGATAAAGCAGGAATTACTACTGCTTGTTTACGAATTAAATCGAAGTGGACTGCTGG 6259 Query 1720 TGGAAAATGAAGAACTTCAATCTCAACTTAAAGAACTCGAGGGCGTCTTACTTCGCAACC 1779 ||||||||| || ||| | || ||| | |||||| |||||||| || ||| Sbjct 6260 CGGAAAATGAGAAAATTCGACCTATCCTTGCGCAGCTCGAGAAGCTCTTACTTTGCGACC 6319 Query 1780 TTTCGCCATCATCTCAACG-TGGTAGCAAAGACTGACGCGCTTGATGAAGAAAAATGGCT 1838 ||||||||||| || |||| | | |||| ||||||||| | ||||| || || ||||| Sbjct 6320 TTTCGCCATCAACT-AACGATTCTGTCAAAAACTGACGCGTTGGATGAGGAGAAGTGGCT 6378 Query 1839 CAATATGATGGGCGCTCTTCTTAAGGACTGGTTCCGCTATGAACAACATTTCGTACATGG 1898 |||||| | ||| | | | ||||||||||| | ||||| |||||| || ||||| Sbjct 6379 TAATATGCTTGGCACGTTCGTCAAGGACTGGTTTAGATATGAGTCACATTTTGTTCATGG 6438 Query 1899 CAAAGAATCAATGCTTGACATTCTAAATGAACGTGGCCTATTATCCACCTTGCCAAATG- 1957 | ||| || | |||||||| |||| || ||||| || ||| | | | ||| Sbjct 6439 TAGAGATTCTCTTGTTGACATTTTAAAAGAGCGTGGATTACTAT---CTGAGTCCGATGC 6495 Query 1958 -GCTTAAC--TTACAAAGGAATCAAAAATGA---AAGCAAATGAGAACGCAGTAGCCTTT 2011 | | ||| || | | || || |||| ||| | ||| | | ||| || Sbjct 6496 TGTTCAACCACTAATAGGTAAGAAATCATGAGTCAAGTTACTGAACAATCCGTACGTTTC 6555 Query 2012 CAAACCGCTATTGCCTCCATCAAACTTATTCAGGCATCTTCTGTTCTTGACCTGACTGAG 2071 || |||||| | ||||| || || || |||||||| ||| | ||| | || | || || Sbjct 6556 CAGACCGCTTTGGCCTCTATTAAGCTCATTCAGGCTTCTGCCGTTTTGGATTTAACCGAA 6615 Query 2072 GACGATTTCGAATTCTTAACTCGTGACCGTGTATGGATTGCAACTGACCGCTCCCGTGCT 2131 || |||||||| || | || || || || |||||||| ||||||||||| |||||| Sbjct 6616 GATGATTTCGATTTTCTGACGAGTAACAAAGTTTGGATTGCTACTGACCGCTCTCGTGCT 6675 Query 2132 CGCCGCGCTATTGAGGCTTGCGTTTATGGAACTCTGGACTTTGTGGGATACCCTCGCTTT 2191 || ||| ||||||||||||||||||| || ||||||||||| ||||||||||||||| Sbjct 6676 CGTCGCTGCGTTGAGGCTTGCGTTTATGGTACGCTGGACTTTGTAGGATACCCTCGCTTT 6735 Query 2192 CCTGCTCCTATTGAGTTTATTGCTGCCGTCATTGCTTATTATGTTCATCCCGTTAACATT 2251 ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 6736 CCTGCTCCTGTTGAGTTTATTGCTGCCGTCATTGCTTATTATGTTCATCCCGTCAACATT 6795 Query 2252 CAAACGGCATGTCTTATTATGGAAGGCGCTGAATTCACCGAAAACATCATTAATGGTGTC 2311 |||||||| ||||| || ||||||||||||||||| || |||||||| |||||||| ||| Sbjct 6796 CAAACGGCCTGTCTCATCATGGAAGGCGCTGAATTTACGGAAAACATTATTAATGGCGTC 6855 Query 2312 GATGCCCCGGTTAAAGCCGCTGAACTCTTCGCGTTTACCTTGCGTGTACGCGCCGGAAAC 2371 || |||||||||||||||||| | |||||||||||||||||||||||||| |||||| Sbjct 6856 GAGCGTCCGGTTAAAGCCGCTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAAC 6915 Query 2372 ACTGAGCTTATTACTTACGCAGAAAACAATGCGCGTGAAAAACTGCGCGCTCAAGGAGTG 2431 ||||| || ||||| |||||||| | || | |||| ||||| | || || |||||||| Sbjct 6916 ACTGACGTTCTTACTGACGCAGAAGAAAACGTGCGTCAAAAATTACGTGCAGAAGGAGTG 6975 Query 2432 ATG-GATGTCTAAA 2444 ||| ||||||||| Sbjct 6976 ATGTAATGTCTAAA 6989 Score = 179 bits (198), Expect = 1e-41 Identities = 658/1047 (63%), Gaps = 71/1047 (7%) Strand=Plus/Plus Query 4445 CTCCAACCTCTTAAATAAGGTCTAATCTATGTTCGGTGCAATCGCTGGCGGTATCGCCTC 4504 ||||| || ||||| | |||| || |||||| ||||| || ||||||||||| || || Sbjct 3652 CTCCAGCCACTTAAGTGAGGTG--ATTTATGTTTGGTGCTATTGCTGGCGGTATTGCTTC 3709 Query 4505 CTCTCTCGCTGGTGGACTCCTGAACAAAGCATTCGGGGGCGGTTCTTCCGCTCCCCAATC 4564 |||| |||||||| | || ||| || || |||||| || || Sbjct 3710 TGCTCTTGCTGGTGGCGCCATGTCTAAATTGTTTGGAGGCGGTCAAAAAGCCGCCTCCGG 3769 Query 4565 TGGCGTTCAAGGTAATGTCCTCGCTACTGA---CAATAATGTA---ATCGGTGCTAATGA 4618 |||| |||||||| |||| || ||||| || ||||| |||| || |||| | Sbjct 3770 TGGCATTCAAGGTGATGTGCTTGCTACCGATAACAATACTGTAGGCATGGGTG------A 3823 Query 4619 TGCTGGTATCAAATCCGCTATTCAGGGTTCTAATCCTCCCAATGGTCAACAAGCTGCTCC 4678 ||||||||| ||||| || ||||| || |||||| ||| || | | | || | || Sbjct 3824 TGCTGGTATTAAATCTGCCATTCAAGGCTCTAATGTTCCTAACCCTGATGAGGCCGTCCC 3883 Query 4679 CAATGCTATATCGGGCGTTCTTGCCGATACTGGCAAAG-ACGCCCT--ATCTTCAAT-CA 4734 | | | | || || | | | || | |||| |||| || | | | | | | || Sbjct 3884 TAGTTTTGTTTCTGGTGCTATGGCTAAAGCTGGTAAAGGACTTCTTGAAGGTACGTTGCA 3943 Query 4735 --CTGGCGCT---GGCGTTA---ATAAACTTATGGAAAAAATCGGACTCTCTA--AAGA- 4783 ||||| || | |||| |||| | | || | ||||| | ||| Sbjct 3944 GGCTGGCACTTCTGCCGTTTCTGATAAGTTGCTTGATTTGGTTGGACTTGGTGGCAAGTC 4003 Query 4784 TGCTGCTGCTAAAGGTAAGGATACGAAAGATTATCTTGCTTCTGCGTTCCCCGAACTCAA 4843 ||| |||| |||||| |||||||| |||||||||||| |||| || || || || || Sbjct 4004 TGCCGCTGATAAAGGAAAGGATACTCGTGATTATCTTGCTGCTGCATTTCCTGAGCTTAA 4063 Query 4844 CCCGTGGGAACGTGCTGGCGCTGGTGCTTCTTCTGCTGGAATGGTTGATGCGGGATTCCA 4903 | ||||| |||||||| |||| |||||| |||||||| |||||||| || ||||| | Sbjct 4064 TGCTTGGGAGCGTGCTGGTGCTGATGCTTCCTCTGCTGGTATGGTTGACGCCGGATTTGA 4123 Query 4904 AAACCAAAAGGAATTAACTCGCATGCAGCTTGACNNNNNNNNNNNNNNNNNNNNNNNNNN 4963 || ||||| || | ||| ||||| || ||| Sbjct 4124 GAATCAAAAAGAGCTTACTAAAATGCAACTGGACAATCAGAAAGAGATTGCCGAGATGCA 4183 Query 4964 NNNNNNNNNNNNNNNNNNNNNNNNNNNTATCCAGTCTGTTACTTCTCGGCAAAATACTAA 5023 || ||||| | ||||| || || ||||| || Sbjct 4184 AAATGAGACTCAAAAAGAGATTGCTGGCATTCAGTCGGCGACTTCACGCCAGAATACGAA 4243 Query 5024 GGACTCTGTGTATGCTCAAAACGAAATGCTCCAATACAACCAAAAAGAATCTATGTCACG 5083 ||| || ||||| ||||| || ||||| || | || || || |||| | || Sbjct 4244 AGACCAGGTATATGCACAAAATGAGATGCTTGCTTATCAACAGAAGGAGTCTACTGCTCG 4303 Query 5084 CGTTGGCGCTATTCTCGAAAACACAAGCCTCACCAAACAACAACAAACTTCTGAAATTAT 5143 ||||| ||||| | |||||||| | || |||| ||||| || ||| || ||||| Sbjct 4304 CGTTGCGTCTATTATGGAAAACACCAATCTTTCCAAGCAACAGCAGGTTTCCGAGATTAT 4363 Query 5144 GCGGCAAATGCTTACTCAGGCTCAAACCTCAGGTCAACACTTTACAAATGACCAAATCCA 5203 ||| |||||||||||||| |||||||| | ||||| | ||||| |||||||||||| | Sbjct 4364 GCGCCAAATGCTTACTCAAGCTCAAACGGCTGGTCAGTATTTTACCAATGACCAAATCAA 4423 Query 5204 AGAACTTACTCGAAAGGTCGGCGCTGATATTGATGCTGTTCGTGCTAACACTGAACGTAC 5263 |||| | ||||| ||||| | ||||| |||| |||| | || | Sbjct 4424 AGAAATGACTCGCAAGGTTAGTGCTGAGGTTGACTTAGTTC-----ATCA--------GC 4470 Query 5264 ACATGTAGAAACGGACCGCTCTAAGCAGGAGGTCCAAAACTCTCGTTACGCTTCCTCACA 5323 | | | |||| | | || || | || || || Sbjct 4471 AAACGCAGAATCAG-----------------------------CGGTATGGCTCTTCTCA 4501 Query 5324 AGTCGGTAAAACCGCCAAGGATGTATCAAATGTCATTAGTGACGCATCTTCTGGTATTGT 5383 | || || || |||||| | || |||||| | | ||| || |||||||| | || Sbjct 4502 TATTGGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTGGTGTGGT 4561 Query 5384 TGATTATTTTCGTGGCGTTGATAAAGCTGTCGCGGATACTTGGAACAATTATTTCAAAGA 5443 |||| ||||| ||| ||||||||||||| || |||||||||||||||| | ||||| Sbjct 4562 TGATATTTTTCATGGTATTGATAAAGCTGTTGCCGATACTTGGAACAATTTCTGGAAAGA 4621 Query 5444 TGGCAAATCGGATGGGATAAGCTCAAA 5470 || ||| | ||||| || |||| || Sbjct 4622 CGGTAAAGCTGATGGTATTGGCTCTAA 4648 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17443152303750