Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20acervulina_20[genbank_20GCA_5F000499425.1_202013-11-05] 3,415 sequences; 45,830,609 total letters Query= NC_003287.2 Length=6407 Score E Sequences producing significant alignments: (Bits) Value seq1431 764 0.0 >seq1431 Length=5483 Score = 764 bits (846), Expect = 0.0 Identities = 428/431 (99%), Gaps = 0/431 (0%) Strand=Plus/Plus Query 5485 AGTACGCGCCCTGTAGCGGCGCATTAAGCGCGGCGGGTGTGGTGGTTACGCGCAGCGTGA 5544 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3168 AGGACGCGCCCTGTAGCGGCGCATTAAGCGCGGCGGGTGTGGTGGTTACGCGCAGCGTGA 3227 Query 5545 CCGCTACACTTGCCAGCGCCCTAGCGCCCGCTCCTTTCGCTTTCTTCCCTTCCTTTCTCG 5604 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3228 CCGCTACACTTGCCAGCGCCCTAGCGCCCGCTCCTTTCGCTTTCTTCCCTTCCTTTCTCG 3287 Query 5605 CCACGTTCGCCGGCTTTCCCCGTCAAGCTCTAAATCGGGGGCTCCCTTTAGGGTTCCGAT 5664 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3288 CCACGTTCGCCGGCTTTCCCCGTCAAGCTCTAAATCGGGGGCTCCCTTTAGGGTTCCGAT 3347 Query 5665 TTAGTGCTTTACGGCACCTCGACCCCAAAAAACTTGATTTGGGTGATGGTTCACGTAGTG 5724 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 3348 TTAGTGCTTTACGGCACCTCGACCCCAAAAAACTTGATTAGGGTGATGGTTCACGTAGTG 3407 Query 5725 GGCCATCGCCCTGATAGACGGTTTTTCGCCCTTTGACGTTGGAGTCCACGTTCTTTAATA 5784 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3408 GGCCATCGCCCTGATAGACGGTTTTTCGCCCTTTGACGTTGGAGTCCACGTTCTTTAATA 3467 Query 5785 GTGGACTCTTGTTCCAAACTGGAACAACACTCAACCCTATCTCGGGCTATTCTTTTGATT 5844 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 3468 GTGGACTCTTGTTCCAAACTGGAACAACACTCAACCCTATCTCGGTCTATTCTTTTGATT 3527 Query 5845 TATAAGGGATTTTGCCGATTTCGGCCTATTGGTTAAAAAATGAGCTGATTTAACAAAAAT 5904 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3528 TATAAGGGATTTTGCCGATTTCGGCCTATTGGTTAAAAAATGAGCTGATTTAACAAAAAT 3587 Query 5905 TTAACGCGAAT 5915 ||||||||||| Sbjct 3588 TTAACGCGAAT 3598 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 20386416749260