Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20acervulina_20[genbank_20GCA_5F000499425.1_202013-11-05] 3,415 sequences; 45,830,609 total letters Query= NC_025824.1 Length=6408 Score E Sequences producing significant alignments: (Bits) Value seq1431 720 0.0 >seq1431 Length=5483 Score = 720 bits (798), Expect = 0.0 Identities = 435/459 (95%), Gaps = 0/459 (0%) Strand=Plus/Plus Query 5486 AGTACGCGCCCTGTAGCGGCGCATTAAGCGCGGCGGGTGTGGTGGTTACGCGCAGCGTGA 5545 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3168 AGGACGCGCCCTGTAGCGGCGCATTAAGCGCGGCGGGTGTGGTGGTTACGCGCAGCGTGA 3227 Query 5546 CCGCTACACTTGCCAGCGCCCTAGCGCCCGCTCCTTTCGCTTTCTTCCCTTCCTTTCTCG 5605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3228 CCGCTACACTTGCCAGCGCCCTAGCGCCCGCTCCTTTCGCTTTCTTCCCTTCCTTTCTCG 3287 Query 5606 CCACGTTCTCCGGCTTTCCCCGTCAAGCTCTAAATCGGGGGATCCCTTTAGGGTTCCGAT 5665 |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 3288 CCACGTTCGCCGGCTTTCCCCGTCAAGCTCTAAATCGGGGGCTCCCTTTAGGGTTCCGAT 3347 Query 5666 TTAGTGCTTTACGGCACCTCGACCTCCAAAAACTTGATTTGGGTGATGGTTCACGTAGTG 5725 |||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||| Sbjct 3348 TTAGTGCTTTACGGCACCTCGACCCCAAAAAACTTGATTAGGGTGATGGTTCACGTAGTG 3407 Query 5726 GGCCATCGCCCTGATAGACGGTTTTTCGCCCTTTGACGTTGGAGTCCACGTTCTTTAATA 5785 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3408 GGCCATCGCCCTGATAGACGGTTTTTCGCCCTTTGACGTTGGAGTCCACGTTCTTTAATA 3467 Query 5786 GTGGACTCTTGTTCCAAACTGGAACAACACTCACAACTAACTCGGCCTATTCTTTTGATT 5845 ||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||| Sbjct 3468 GTGGACTCTTGTTCCAAACTGGAACAACACTCAACCCTATCTCGGTCTATTCTTTTGATT 3527 Query 5846 TATAAGGATTTTTGTCATTTTCTGCTTACTGGTTAAAAAATAAGCTGATTTAACAAATAT 5905 ||||||| ||||| | |||| || || |||||||||||| ||||||||||||||| || Sbjct 3528 TATAAGGGATTTTGCCGATTTCGGCCTATTGGTTAAAAAATGAGCTGATTTAACAAAAAT 3587 Query 5906 TTAACGCGAAATTTAACAAAACATTAACGTTTACAATTT 5944 |||||||||| |||||||||| ||||||| ||||||||| Sbjct 3588 TTAACGCGAATTTTAACAAAATATTAACGCTTACAATTT 3626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 20389616626320