Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20maxima_20[genbank_20GCA_5F000499605.1_202013-11-06] 3,564 sequences; 45,975,062 total letters Query= NC_003287.2 Length=6407 Score E Sequences producing significant alignments: (Bits) Value seq1454 764 0.0 >seq1454 Length=5923 Score = 764 bits (846), Expect = 0.0 Identities = 428/431 (99%), Gaps = 0/431 (0%) Strand=Plus/Plus Query 5485 AGTACGCGCCCTGTAGCGGCGCATTAAGCGCGGCGGGTGTGGTGGTTACGCGCAGCGTGA 5544 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3373 AGGACGCGCCCTGTAGCGGCGCATTAAGCGCGGCGGGTGTGGTGGTTACGCGCAGCGTGA 3432 Query 5545 CCGCTACACTTGCCAGCGCCCTAGCGCCCGCTCCTTTCGCTTTCTTCCCTTCCTTTCTCG 5604 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3433 CCGCTACACTTGCCAGCGCCCTAGCGCCCGCTCCTTTCGCTTTCTTCCCTTCCTTTCTCG 3492 Query 5605 CCACGTTCGCCGGCTTTCCCCGTCAAGCTCTAAATCGGGGGCTCCCTTTAGGGTTCCGAT 5664 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3493 CCACGTTCGCCGGCTTTCCCCGTCAAGCTCTAAATCGGGGGCTCCCTTTAGGGTTCCGAT 3552 Query 5665 TTAGTGCTTTACGGCACCTCGACCCCAAAAAACTTGATTTGGGTGATGGTTCACGTAGTG 5724 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 3553 TTAGTGCTTTACGGCACCTCGACCCCAAAAAACTTGATTAGGGTGATGGTTCACGTAGTG 3612 Query 5725 GGCCATCGCCCTGATAGACGGTTTTTCGCCCTTTGACGTTGGAGTCCACGTTCTTTAATA 5784 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3613 GGCCATCGCCCTGATAGACGGTTTTTCGCCCTTTGACGTTGGAGTCCACGTTCTTTAATA 3672 Query 5785 GTGGACTCTTGTTCCAAACTGGAACAACACTCAACCCTATCTCGGGCTATTCTTTTGATT 5844 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 3673 GTGGACTCTTGTTCCAAACTGGAACAACACTCAACCCTATCTCGGTCTATTCTTTTGATT 3732 Query 5845 TATAAGGGATTTTGCCGATTTCGGCCTATTGGTTAAAAAATGAGCTGATTTAACAAAAAT 5904 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3733 TATAAGGGATTTTGCCGATTTCGGCCTATTGGTTAAAAAATGAGCTGATTTAACAAAAAT 3792 Query 5905 TTAACGCGAAT 5915 ||||||||||| Sbjct 3793 TTAACGCGAAT 3803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 20386382575216