Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20maxima_20[genbank_20GCA_5F000499605.1_202013-11-06] 3,564 sequences; 45,975,062 total letters Query= NC_025824.1 Length=6408 Score E Sequences producing significant alignments: (Bits) Value seq1454 720 0.0 >seq1454 Length=5923 Score = 720 bits (798), Expect = 0.0 Identities = 435/459 (95%), Gaps = 0/459 (0%) Strand=Plus/Plus Query 5486 AGTACGCGCCCTGTAGCGGCGCATTAAGCGCGGCGGGTGTGGTGGTTACGCGCAGCGTGA 5545 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3373 AGGACGCGCCCTGTAGCGGCGCATTAAGCGCGGCGGGTGTGGTGGTTACGCGCAGCGTGA 3432 Query 5546 CCGCTACACTTGCCAGCGCCCTAGCGCCCGCTCCTTTCGCTTTCTTCCCTTCCTTTCTCG 5605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3433 CCGCTACACTTGCCAGCGCCCTAGCGCCCGCTCCTTTCGCTTTCTTCCCTTCCTTTCTCG 3492 Query 5606 CCACGTTCTCCGGCTTTCCCCGTCAAGCTCTAAATCGGGGGATCCCTTTAGGGTTCCGAT 5665 |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 3493 CCACGTTCGCCGGCTTTCCCCGTCAAGCTCTAAATCGGGGGCTCCCTTTAGGGTTCCGAT 3552 Query 5666 TTAGTGCTTTACGGCACCTCGACCTCCAAAAACTTGATTTGGGTGATGGTTCACGTAGTG 5725 |||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||| Sbjct 3553 TTAGTGCTTTACGGCACCTCGACCCCAAAAAACTTGATTAGGGTGATGGTTCACGTAGTG 3612 Query 5726 GGCCATCGCCCTGATAGACGGTTTTTCGCCCTTTGACGTTGGAGTCCACGTTCTTTAATA 5785 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3613 GGCCATCGCCCTGATAGACGGTTTTTCGCCCTTTGACGTTGGAGTCCACGTTCTTTAATA 3672 Query 5786 GTGGACTCTTGTTCCAAACTGGAACAACACTCACAACTAACTCGGCCTATTCTTTTGATT 5845 ||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||| Sbjct 3673 GTGGACTCTTGTTCCAAACTGGAACAACACTCAACCCTATCTCGGTCTATTCTTTTGATT 3732 Query 5846 TATAAGGATTTTTGTCATTTTCTGCTTACTGGTTAAAAAATAAGCTGATTTAACAAATAT 5905 ||||||| ||||| | |||| || || |||||||||||| ||||||||||||||| || Sbjct 3733 TATAAGGGATTTTGCCGATTTCGGCCTATTGGTTAAAAAATGAGCTGATTTAACAAAAAT 3792 Query 5906 TTAACGCGAAATTTAACAAAACATTAACGTTTACAATTT 5944 |||||||||| |||||||||| ||||||| ||||||||| Sbjct 3793 TTAACGCGAATTTTAACAAAATATTAACGCTTACAATTT 3831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 20389582446912