Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20ovale_20wallikeri_20[genbank_20GCA_5F900088545.1_202016 -06-16] 3,484 sequences; 36,406,953 total letters Query= NC_007856.1 Length=5486 Score E Sequences producing significant alignments: (Bits) Value seq1681 1544 0.0 >seq1681 Length=5635 Score = 1544 bits (1712), Expect = 0.0 Identities = 1802/2425 (74%), Gaps = 68/2425 (3%) Strand=Plus/Plus Query 468 TAATCGAAGAGTTAGACGAATGCTACAACGTGCTCGGACAACTTGATATTAATAACACTA 527 |||| || || || | |||||||||| |||||| |||||||||||||||||||||| Sbjct 3047 TAATGGATGAATTGGCACAATGCTACAATGTGCTCCCCCAACTTGATATTAATAACACTA 3106 Query 528 TAGACCACAAACCTATCGGTAACGCCAAATGGGACTTAATGTATGAAAAACCTGTCTATA 587 |||||||| || || ||| |||||| ||| | | || || | || Sbjct 3107 TAGACCACCGCCCCGAAGGGGACGAAAAATGGTTTTTAGAGAACGAGAAGACGGTT---- 3162 Query 588 AACACTGGTATG-----AACTGGTATCAAAACGACCCCTTAAATCAATCAGAGAGGACTA 642 || | | | || | |||| | |||| || ||||| || | || || || Sbjct 3163 -ACGCAGTTTTGCCGCAAGCTGGCTGCTGAACGCCCTCTTAAGGATATTCGCGATGAGTA 3221 Query 643 CAACTATGCAAAGGCTAAGGGTACTAAAGATGAGTGCTCGAAAATCCTTGAGGAATCCAC 702 || || | || || |||| ||| |||||||| || | | | || |||| ||||| Sbjct 3222 TAATTACCCCAAAAAGAAAGGTATTAAGGATGAGTGTTCAAGATTGCTGGAGGCCTCCAC 3281 Query 703 CATGAAATCCCGCCGTGGCTTTACCGTTCAGAGATTGATGAATGCTATGCGTACTGCCCA 762 |||||||| || | |||||| | ||||| | ||||||||||| ||||| || || Sbjct 3282 TATGAAATCGCGTAGAGGCTTTGCTATTCAGCGTTTGATGAATGCAATGCGACAGGCTCA 3341 Query 763 CACTGATGGCTGGTATGTTGTATTCGATACTCTCACCTTAGCTGATGATCGTATTA-AGG 821 ||||||| |||| | | || || || |||||||| || ||||| || || |||| ||| Sbjct 3342 TGCTGATGGTTGGTTTATCGTTTTTGACACTCTCACGTTGGCTGACGACCG-ATTAGAGG 3400 Query 822 ACTTCTATGCTAACCCCAATGCTCTTCGTGACTATTTCCGTGATATTGGCCGTATGGTTC 881 || |||| ||| ||||||||| | ||||||||||| ||||||||||| |||||||||| Sbjct 3401 CGTTTTATGATAATCCCAATGCTTTGCGTGACTATTTTCGTGATATTGGTCGTATGGTTC 3460 Query 882 TCACTGCCGAGGGTCGTTCGGTCCATGATTCATCTTCGGACTGCTATCAGTACTTTTGTG 941 | ||||||||||||| || |||||||| | |||||||||||||| ||||||| Sbjct 3461 TTGCTGCCGAGGGTCGCAAGGCTAATGATTCACACGCCGACTGCTATCAGTATTTTTGTG 3520 Query 942 TGCCTGAGTATGGCACCCAGC--ATGGCCGTTTACACTTTCACGCAGTGCATCTTATGCG 999 ||||||||||||| | |||| |||||||| | || || || || ||||| ||||||| Sbjct 3521 TGCCTGAGTATGGTA--CAGCTAATGGCCGTCTTCATTTCCATGCGGTGCACTTTATGCG 3578 Query 1000 CACACTTCCTTTGGGTTCTCTCGACCCTAACTTTGGTAAGCTGGTGCGTACTAATCGGCA 1059 ||||||||| ||| | |||||||| |||||| | ||| || | | || || Sbjct 3579 GACACTTCCTACAGGTAGCGTTGACCCTAATTTTGGTCGTCGGGTACGCAATCGCCGCCA 3638 Query 1060 AATAAATAGCTTGCAAAACACATGGCCTTATGGTTACTCTATGCCCATCGCAGTCCGGTA 1119 |||||||||||||||| || ||||||||||||||| ||||||||||||||| || || Sbjct 3639 GTTAAATAGCTTGCAAAATACGTGGCCTTATGGTTACAGTATGCCCATCGCAGTTCGCTA 3698 Query 1120 TTCTCAGGATGCTTTCTCTCGCGCTGGATGGCTCTGGCCTGTCGATACAAAGGGTGAACC 1179 | ||||| ||||| || || |||| ||| | |||||||| ||| | || ||||| || Sbjct 3699 CACGCAGGACGCTTTTTCACGTTCTGGTTGGTTGTGGCCTGTTGATGCTAAAGGTGAGCC 3758 Query 1180 CCTTAAATCCACCTCGTATATGGCTGTAGGCTTCTACGTTGCTAAATACGTTAATAAAAA 1239 |||||| | ||| ||||||||||| || ||||| || |||||||||||||| ||||| Sbjct 3759 GCTTAAAGCTACCAGTTATATGGCTGTTGGTTTCTATGTGGCTAAATACGTTAACAAAAA 3818 Query 1240 ATCTGATGTTGACATAGCCGCAAAAGGCTTAGGGAATCAAAAATGGAACGCTACATTAAA 1299 || ||| | ||| | || || ||||| |||| | || |||||||| || |||| Sbjct 3819 GTCAGATATGGACCTTGCTGCTAAAGGTCTAGGAGCTAAAGAATGGAACAACTCACTAAA 3878 Query 1300 AACGCAGATGGCTCTTTTACCAAAGAAACTATTTCGAATTCGAATGAGCCGCAACTTCGG 1359 ||| || || | || | || ||||| || || |||| ||||||||||||||||||| Sbjct 3879 AACCAAGCTGTCGCTACTTCCCAAGAAGCTGTTCAGAATCAGAATGAGCCGCAACTTCGG 3938 Query 1360 GATGAAACTACTCCCAATGACGACGCTGACCGCGGAGTGTTTAATCCAACTGACCCAAGT 1419 ||||||| | ||| ||||||| | ||| || ||||||| ||||||||||| ||| | | Sbjct 3939 GATGAAAATGCTCACAATGACAAATCTGTCCACGGAGTGCTTAATCCAACTTACCAAGCT 3998 Query 1420 GGGTTACGACGTGACCCCGTTCAACAACATCTTGAAGCAGAACGCCAAGAAAGAGCTACG 1479 ||||||||||| ||| ||||||||| | || |||||||||||||| || | |||| | | Sbjct 3999 GGGTTACGACGCGACGCCGTTCAACCAGATATTGAAGCAGAACGCAAAAAGAGAGATGAG 4058 Query 1480 ATTGAGGCTGGCAAAGCAATCTGTAGCCGACGTTTTGGAGGCGCAACCTGTGACGACCAA 1539 ||||||||||| ||| |||||||||||||||||| |||||||||||||||||| || Sbjct 4059 ATTGAGGCTGGGAAAAGTTACTGTAGCCGACGTTTTGGCGGCGCAACCTGTGACGACAAA 4118 Query 1540 TCTGCTAAAATTCATGCGCAATTTGACCCGAACAATCGGAGCGTCCAGCCTACAGAGTTT 1599 |||||| ||||| |||||| || || || || || | |||| ||| |||||||| Sbjct 4119 TCTGCTCAAATTTATGCGCGCTTCGATAAAAATGATTGGCGTATCCAACCTGCAGAGTTT 4178 Query 1600 TATCGCTTCAATGACGCAGAAATTAGCAAATACGGATATTTCTGATGAAACTAAAAACTA 1659 ||||||||| ||||||||||| ||| || | |||||||||||||||| | ||||| || Sbjct 4179 TATCGCTTCCATGACGCAGAAGTTAACACTTTCGGATATTTCTGATGAGTCGAAAAATTA 4238 Query 1660 CGTTACTAATGCAGGAATTGCTGTTGCTGACTTACGACTTAAATCGAAGTGGACTGCTGG 1719 || ||| ||||||||| || |||| |||||| |||||||||||||||||||||| Sbjct 4239 TCTTGATAAAGCAGGAATTACTACTGCTTGTTTACGAATTAAATCGAAGTGGACTGCTGG 4298 Query 1720 TGGAAAATGAAGAACTTCAATCTCAACTTAAAGAACTCGAGGGCGTCTTACTTCGCAACC 1779 ||||||||| || ||| | || ||| | |||||| |||||||| || ||| Sbjct 4299 CGGAAAATGAGAAAATTCGACCTATCCTTGCGCAGCTCGAGAAGCTCTTACTTTGCGACC 4358 Query 1780 TTTCGCCATCATCTCAACG-TGGTAGCAAAGACTGACGCGCTTGATGAAGAAAAATGGCT 1838 ||||||||||| || |||| | | |||| ||||||||| | ||||| || || ||||| Sbjct 4359 TTTCGCCATCAACT-AACGATTCTGTCAAAAACTGACGCGTTGGATGAGGAGAAGTGGCT 4417 Query 1839 CAATATGATGGGCGCTCTTCTTAAGGACTGGTTCCGCTATGAACAACATTTCGTACATGG 1898 |||||| | ||| | | | ||||||||||| | ||||| |||||| || ||||| Sbjct 4418 TAATATGCTTGGCACGTTCGTCAAGGACTGGTTTAGATATGAGTCACATTTTGTTCATGG 4477 Query 1899 CAAAGAATCAATGCTTGACATTCTAAATGAACGTGGCCTATTATCCACCTTGCCAAATG- 1957 | ||| || | |||||||| |||| || ||||| || ||| | | | ||| Sbjct 4478 TAGAGATTCTCTTGTTGACATTTTAAAAGAGCGTGGATTACTAT---CTGAGTCCGATGC 4534 Query 1958 -GCTTAAC--TTACAAAGGAATCAAAAATGA---AAGCAAATGAGAACGCAGTAGCCTTT 2011 | | ||| || | | || || |||| ||| | ||| | | ||| || Sbjct 4535 TGTTCAACCACTAATAGGTAAGAAATCATGAGTCAAGTTACTGAACAATCCGTACGTTTC 4594 Query 2012 CAAACCGCTATTGCCTCCATCAAACTTATTCAGGCATCTTCTGTTCTTGACCTGACTGAG 2071 || |||||| | ||||| || || || |||||||| ||| | ||| | || | || || Sbjct 4595 CAGACCGCTTTGGCCTCTATTAAGCTCATTCAGGCTTCTGCCGTTTTGGATTTAACCGAA 4654 Query 2072 GACGATTTCGAATTCTTAACTCGTGACCGTGTATGGATTGCAACTGACCGCTCCCGTGCT 2131 || |||||||| || | || || || || |||||||| ||||||||||| |||||| Sbjct 4655 GATGATTTCGATTTTCTGACGAGTAACAAAGTTTGGATTGCTACTGACCGCTCTCGTGCT 4714 Query 2132 CGCCGCGCTATTGAGGCTTGCGTTTATGGAACTCTGGACTTTGTGGGATACCCTCGCTTT 2191 || ||| ||||||||||||||||||| || ||||||||||| ||||||||||||||| Sbjct 4715 CGTCGCTGCGTTGAGGCTTGCGTTTATGGTACGCTGGACTTTGTAGGATACCCTCGCTTT 4774 Query 2192 CCTGCTCCTATTGAGTTTATTGCTGCCGTCATTGCTTATTATGTTCATCCCGTTAACATT 2251 ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 4775 CCTGCTCCTGTTGAGTTTATTGCTGCCGTCATTGCTTATTATGTTCATCCCGTCAACATT 4834 Query 2252 CAAACGGCATGTCTTATTATGGAAGGCGCTGAATTCACCGAAAACATCATTAATGGTGTC 2311 |||||||| ||||| || ||||||||||||||||| || |||||||| |||||||| ||| Sbjct 4835 CAAACGGCCTGTCTCATCATGGAAGGCGCTGAATTTACGGAAAACATTATTAATGGCGTC 4894 Query 2312 GATGCCCCGGTTAAAGCCGCTGAACTCTTCGCGTTTACCTTGCGTGTACGCGCCGGAAAC 2371 || |||||||||||||||||| | |||||||||||||||||||||||||| |||||| Sbjct 4895 GAGCGTCCGGTTAAAGCCGCTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAAC 4954 Query 2372 ACTGAGCTTATTACTTACGCAGAAAACAATGCGCGTGAAAAACTGCGCGCTCAAGGAGTG 2431 ||||| || ||||| |||||||| | || | |||| ||||| | || || |||||||| Sbjct 4955 ACTGACGTTCTTACTGACGCAGAAGAAAACGTGCGTCAAAAATTACGTGCAGAAGGAGTG 5014 Query 2432 ATG-GATGTC------TAAAAAATCTATTCGC---CGCTCTGGT---------------- 2465 ||| ||||| ||||||| | | || ||| ||||| Sbjct 5015 ATGTAATGTCTAAAGGTAAAAAACGTTCTGGCGCTCGCCCTGGTCGTCCGCAGCCGTTGC 5074 Query 2466 -----------GGCAAATCTAAAGGTGCTCGCCTCTGGTATGTTGGCGGCACACAATTCT 2514 ||||| |||||| ||||| || |||||||| || || |||||| | Sbjct 5075 GAGGTACTAAAGGCAAGCGTAAAGGCGCTCGTCTTTGGTATGTAGGTGGTCAACAATTTT 5134 Query 2515 AATCTCTAAGGGGCTTCGGCCCCTCTATTTAAGGATACAAAATGTCTAACGTACAAACTT 2574 ||| | |||||||||||||||| || || |||||| | |||||||| | |||||| Sbjct 5135 AATTGC--AGGGGCTTCGGCCCCT-TACTTGAGGATAAATTATGTCTAATATTCAAACTG 5191 Query 2575 CCGCTGAACGTATTCCGCATGACCTCTCACATCTGGTATTCGAAGCTGGTAAAATCGGAC 2634 ||| || ||||| ||||||||||| || ||||| | ||| |||||| | || || | Sbjct 5192 GCGCCGAGCGTATGCCGCATGACCTTTCCCATCTTGGCTTCCTTGCTGGTCAGATTGGTC 5251 Query 2635 GCCTTAAAACTATCTCCTGGACTCCTGTTGTCGCTGGTGATTCTTACGAAACTGAAATGG 2694 | |||| || || || ||||| ||| ||||||| || || | ||| | || | Sbjct 5252 GTCTTATTACCATTTCAACTACTCCGGTTATCGCTGGCGACTCCTTCGAGATGGACGCCG 5311 Query 2695 TAGGCGCTATTCGTCTTTCTCCTCTCCGTCGTGGTCTGGCTGTCGACTCTCGCGTCGACG 2754 | |||||| | ||||||||||| | |||||||| || ||| | |||||| || ||| Sbjct 5312 TTGGCGCTCTCCGTCTTTCTCCATTGCGTCGTGGCCTTGCTATTGACTCTACTGTAGACA 5371 Query 2755 TCTTTACTTTCTATATCCCTCATCGTCATGTCTATGGTCAACAATGGATTGACTTTATGA 2814 | |||||||| ||| ||||||||||||| || |||||| |||| |||||| | || |||| Sbjct 5372 TTTTTACTTTTTATGTCCCTCATCGTCACGTTTATGGTGAACAGTGGATTAAGTTCATGA 5431 Query 2815 AGACTGGCGTTAACGCTACTCCTCT 2839 || ||| ||||| || |||||||| Sbjct 5432 AGGATGGTGTTAATGCCACTCCTCT 5456 Score = 361 bits (400), Expect = 2e-96 Identities = 837/1236 (68%), Gaps = 69/1236 (6%) Strand=Plus/Plus Query 2770 TCCCTCATCGTCATGTCTATGGTCAACAATGGATTGACTTTATGAAGACTGGCGTTAACG 2829 ||||||||||||| || |||||| |||| |||||| | || |||||| ||| ||||| | Sbjct 1 TCCCTCATCGTCACGTTTATGGTGAACAGTGGATTAAGTTCATGAAGGATGGTGTTAATG 60 Query 2830 CTACTCCTCTGGCTCCGGT-AACTTGTTCCTCTGGCTGG---GATTCTGCTGCCTATCTT 2885 | |||||||| | | || ||| | |||| | || ||| || | |||| Sbjct 61 CCACTCCTCTCCCGACTGTTAACA----CTACTGGTTATATTGACCATGCCGCTTTTCTT 116 Query 2886 GGCACTATC--CCGTCA-ACTAATTTGAAGGTTCCTAA--ATTCCTTCATCAATCTTATC 2940 ||||| || || | | || ||| || | ||||| ||| || ||| |||| Sbjct 117 GGCACGATTAACCCTGATACCAAT---AAAATCCCTAAGCATTTGTT--TCAGGGTTATT 171 Query 2941 TCAATATTTACAACAACTACTTTAAGCCGCCGTGGTCTAATGACCTCACCTATGCTAACC 3000 | ||||| || |||||||| ||||| |||||||| ||||| ||| | ||||||| Sbjct 172 TGAATATCTATAACAACTATTTTAAAGCGCCGTGGATGCCTGACCGTACCGAGGCTAACC 231 Query 3001 CATCTAATATGCCCGCTGAGGATTACAAATGG---GGCGTTCGTGTC-GCTAACTTAAAA 3056 | |||| || | | ||| | | || | ||| | || | || |||| Sbjct 232 C---TAATGAGCTTAATCAAGATGATGCTCGTTATGGTTTCCGTTGCTGCCATCTCAAAA 288 Query 3057 TCTATCTGGACCGCGCCCCTTCCTCCTGATTCATTAACTAAGCAGG-ATATGACTACTGG 3115 | || ||||| || || ||||||||||| | | | || | | ||||| ||| Sbjct 289 AC-ATTTGGACTGCTCCGCTTCCTCCTGAGAC-TGAGCTTTCTCGCCAAATGACGACTT- 345 Query 3116 CGCTACCAC---TATCGATATTATGGGCCTACAAGCTGCCTATGCTAAACTCCACACTGA 3172 ||||||| ||| || |||||||| || |||||||| |||||||| | || ||||| Sbjct 346 --CTACCACATCTATTGACATTATGGGTCTGCAAGCTGCTTATGCTAATTTGCATACTGA 403 Query 3173 ACAGGAACGTGACTATTTCATGACTCGCTACCGCGATATTATGAAAGACTTTGGCGGTCA 3232 || |||||||| || |||||| || |||| ||| |||| ||||| ||| | Sbjct 404 CCAAGAACGTGATTACTTCATGCAGCGTTACCATGATGTTATTTCTTCATTTGGAGGTAA 463 Query 3233 CACCTCCTACGACGGTGATAACCGTCCTCTGCTCCTGATGCGCTCTGAATTTTGGGCCTC 3292 ||||| || |||| ||| ||||||||| | || | ||||||||| | | ||||| || Sbjct 464 AACCTCTTATGACGCTGACAACCGTCCTTTACTTGTCATGCGCTCTAATCTCTGGGCATC 523 Query 3293 TGGCTATGACGTCGACGGTACTGACCAAACTTCATTGGGTCAGTTCTCTGGTCGCGTCCA 3352 ||||||||| || || || ||||||||||| || || || ||||| |||||||| || || Sbjct 524 TGGCTATGATGTTGATGGAACTGACCAAACGTCGTTAGGCCAGTTTTCTGGTCGTGTTCA 583 Query 3353 ACAAACCTTTAATCATAAAGTGCCTCGCTTCTATGTTCCTGAGCATGGCGTAATTATGAC 3412 ||| |||| ||| ||| ||||| || |||| |||||||||||||||| || | || Sbjct 584 ACAGACCTATAAACATTCTGTGCCGCGTTTCTTTGTTCCTGAGCATGGCACTATGTTTAC 643 Query 3413 TTTATCTGTTACTCGCTTCCCTCCTACT--CACGAAATGGAAATGCACTATCTCGTCGGT 3470 | | | || ||| || || |||||| || ||| || || || || || || | Sbjct 644 TCTTGCGCTTGTTCGTTTTCCGCCTACTGCGACTAAA--GAGATTCAGTACCTTAACGCT 701 Query 3471 AAGGAATCTCTGACTTATACTGACATTGCCTGTGACCCTGCTCT-TATGGCTAACCTGCC 3529 || | || |||||||||| || ||||| | ||||||| | | |||||| ||| |||| Sbjct 702 AAAGGTGCTTTGACTTATACCGATATTGCTGGCGACCCTGTTTTGTATGGC-AACTTGCC 760 Query 3530 TCCGCGTGAAATTGAGGTAAAAGACCTCTTTCACTCTGCTGGT---ACTGGTAAATTCAA 3586 |||||||||||| | || || | || | |||| || | || || || || Sbjct 761 GCCGCGTGAAATTTCTATGAAGGATGTTTTCCGTTCTGGTGATTCGTCTAAGAAGTTTAA 820 Query 3587 AATTGCCGAAGGTCAATGGTATCGTACTCAGCCTGACCGCGTTGCCTTCC--CTTATAAC 3644 ||||| || ||||| ||||||||| | |||| ||| | ||| ||||| || Sbjct 821 GATTGCTGAGGGTCAGTGGTATCGTTATGCGCCTTCGTATGTTTC--TCCTGCTTATCAC 878 Query 3645 GCTCTTGACGGCTTCCCTTTCTATTC-TGAACTGCCGTCTAATGATATTCTCGAACGTGT 3703 |||||| |||||||| ||| |||| |||| ||| ||| |||| | | ||||| || Sbjct 879 CTTCTTGAAGGCTTCCCATTC-ATTCAGGAACCGCCTTCTGGTGATTTGCAAGAACGCGT 937 Query 3704 ACTTGTTCGAACTGATAACTATGATGAAATCTTCCAGTCTATGCAACTTGCACACTGGAA 3763 |||| |||| || | ||||| | |||||||| | || | || ||||| Sbjct 938 ACTTATTCGCCACCATGATTATGACCAGTGTTTCCAGTCCGTTCAGTTGTTGCAGTGGAA 997 Query 3764 CATGCAAACTAAATTTAACACTACTGTATATCGTCATATGCCTACCACTCGTGATGGCAT 3823 | || ||||||||| || || ||||| || |||| |||||||| ||| || Sbjct 998 TAGTCAGGTTAAATTTAATGTGACCGTTTATCGCAATCTGCCGACCACTCGCGATTCAAT 1057 Query 3824 CATGA---CGTCATAAAA---------------CAAAACGTTGAACGGGTACAAATTTTA 3865 ||||| ||| |||||| | |||| ||| |||| |||||||| Sbjct 1058 CATGACTTCGTGATAAAAGATTGAGTGTGAGGTTATAACGCCGAAGCGGTAAAAATTTTA 1117 Query 3866 ATTTGTGCCTGTTCAAGGTTGAACAAGCGAAGCGCGTTAGCTAACTTACTTAAGGAAATT 3925 |||| |||| | |||||| ||||||||||||| ||| | | ||| |||| || Sbjct 1118 ATTTTTGCCGCTGAGGGGTTGACCAAGCGAAGCGCGGTAGGTTTTCTGCTT-AGGAGTTT 1176 Query 3926 -CTCATGTTTCAAACTTATCTCTCTAAACATAATTC 3960 |||||||||| |||| | | ||| |||||||| Sbjct 1177 AATCATGTTTCAGACTTTTATTTCTCGCCATAATTC 1212 Score = 179 bits (198), Expect = 1e-41 Identities = 658/1047 (63%), Gaps = 71/1047 (7%) Strand=Plus/Plus Query 4445 CTCCAACCTCTTAAATAAGGTCTAATCTATGTTCGGTGCAATCGCTGGCGGTATCGCCTC 4504 ||||| || ||||| | |||| || |||||| ||||| || ||||||||||| || || Sbjct 1691 CTCCAGCCACTTAAGTGAGGTG--ATTTATGTTTGGTGCTATTGCTGGCGGTATTGCTTC 1748 Query 4505 CTCTCTCGCTGGTGGACTCCTGAACAAAGCATTCGGGGGCGGTTCTTCCGCTCCCCAATC 4564 |||| |||||||| | || ||| || || |||||| || || Sbjct 1749 TGCTCTTGCTGGTGGCGCCATGTCTAAATTGTTTGGAGGCGGTCAAAAAGCCGCCTCCGG 1808 Query 4565 TGGCGTTCAAGGTAATGTCCTCGCTACTGA---CAATAATGTA---ATCGGTGCTAATGA 4618 |||| |||||||| |||| || ||||| || ||||| |||| || |||| | Sbjct 1809 TGGCATTCAAGGTGATGTGCTTGCTACCGATAACAATACTGTAGGCATGGGTG------A 1862 Query 4619 TGCTGGTATCAAATCCGCTATTCAGGGTTCTAATCCTCCCAATGGTCAACAAGCTGCTCC 4678 ||||||||| ||||| || ||||| || |||||| ||| || | | | || | || Sbjct 1863 TGCTGGTATTAAATCTGCCATTCAAGGCTCTAATGTTCCTAACCCTGATGAGGCCGTCCC 1922 Query 4679 CAATGCTATATCGGGCGTTCTTGCCGATACTGGCAAAG-ACGCCCT--ATCTTCAAT-CA 4734 | | | | || || | | | || | |||| |||| || | | | | | | || Sbjct 1923 TAGTTTTGTTTCTGGTGCTATGGCTAAAGCTGGTAAAGGACTTCTTGAAGGTACGTTGCA 1982 Query 4735 --CTGGCGCT---GGCGTTA---ATAAACTTATGGAAAAAATCGGACTCTCTA--AAGA- 4783 ||||| || | |||| |||| | | || | ||||| | ||| Sbjct 1983 GGCTGGCACTTCTGCCGTTTCTGATAAGTTGCTTGATTTGGTTGGACTTGGTGGCAAGTC 2042 Query 4784 TGCTGCTGCTAAAGGTAAGGATACGAAAGATTATCTTGCTTCTGCGTTCCCCGAACTCAA 4843 ||| |||| |||||| |||||||| |||||||||||| |||| || || || || || Sbjct 2043 TGCCGCTGATAAAGGAAAGGATACTCGTGATTATCTTGCTGCTGCATTTCCTGAGCTTAA 2102 Query 4844 CCCGTGGGAACGTGCTGGCGCTGGTGCTTCTTCTGCTGGAATGGTTGATGCGGGATTCCA 4903 | ||||| |||||||| |||| |||||| |||||||| |||||||| || ||||| | Sbjct 2103 TGCTTGGGAGCGTGCTGGTGCTGATGCTTCCTCTGCTGGTATGGTTGACGCCGGATTTGA 2162 Query 4904 AAACCAAAAGGAATTAACTCGCATGCAGCTTGACNNNNNNNNNNNNNNNNNNNNNNNNNN 4963 || ||||| || | ||| ||||| || ||| Sbjct 2163 GAATCAAAAAGAGCTTACTAAAATGCAACTGGACAATCAGAAAGAGATTGCCGAGATGCA 2222 Query 4964 NNNNNNNNNNNNNNNNNNNNNNNNNNNTATCCAGTCTGTTACTTCTCGGCAAAATACTAA 5023 || ||||| | ||||| || || ||||| || Sbjct 2223 AAATGAGACTCAAAAAGAGATTGCTGGCATTCAGTCGGCGACTTCACGCCAGAATACGAA 2282 Query 5024 GGACTCTGTGTATGCTCAAAACGAAATGCTCCAATACAACCAAAAAGAATCTATGTCACG 5083 ||| || ||||| ||||| || ||||| || | || || || |||| | || Sbjct 2283 AGACCAGGTATATGCACAAAATGAGATGCTTGCTTATCAACAGAAGGAGTCTACTGCTCG 2342 Query 5084 CGTTGGCGCTATTCTCGAAAACACAAGCCTCACCAAACAACAACAAACTTCTGAAATTAT 5143 ||||| ||||| | |||||||| | || |||| ||||| || ||| || ||||| Sbjct 2343 CGTTGCGTCTATTATGGAAAACACCAATCTTTCCAAGCAACAGCAGGTTTCCGAGATTAT 2402 Query 5144 GCGGCAAATGCTTACTCAGGCTCAAACCTCAGGTCAACACTTTACAAATGACCAAATCCA 5203 ||| |||||||||||||| |||||||| | ||||| | ||||| |||||||||||| | Sbjct 2403 GCGCCAAATGCTTACTCAAGCTCAAACGGCTGGTCAGTATTTTACCAATGACCAAATCAA 2462 Query 5204 AGAACTTACTCGAAAGGTCGGCGCTGATATTGATGCTGTTCGTGCTAACACTGAACGTAC 5263 |||| | ||||| ||||| | ||||| |||| |||| | || | Sbjct 2463 AGAAATGACTCGCAAGGTTAGTGCTGAGGTTGACTTAGTTC-----ATCA--------GC 2509 Query 5264 ACATGTAGAAACGGACCGCTCTAAGCAGGAGGTCCAAAACTCTCGTTACGCTTCCTCACA 5323 | | | |||| | | || || | || || || Sbjct 2510 AAACGCAGAATCAG-----------------------------CGGTATGGCTCTTCTCA 2540 Query 5324 AGTCGGTAAAACCGCCAAGGATGTATCAAATGTCATTAGTGACGCATCTTCTGGTATTGT 5383 | || || || |||||| | || |||||| | | ||| || |||||||| | || Sbjct 2541 TATTGGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTGGTGTGGT 2600 Query 5384 TGATTATTTTCGTGGCGTTGATAAAGCTGTCGCGGATACTTGGAACAATTATTTCAAAGA 5443 |||| ||||| ||| ||||||||||||| || |||||||||||||||| | ||||| Sbjct 2601 TGATATTTTTCATGGTATTGATAAAGCTGTTGCCGATACTTGGAACAATTTCTGGAAAGA 2660 Query 5444 TGGCAAATCGGATGGGATAAGCTCAAA 5470 || ||| | ||||| || |||| || Sbjct 2661 CGGTAAAGCTGATGGTATTGGCTCTAA 2687 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17442535305060