Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uroleptopsis_20citrina_20[genbank_20GCA_5F001653735.1_202016-05-31] 42,418 sequences; 32,347,234 total letters Query= NC_004287.1 Length=5078 Score E Sequences producing significant alignments: (Bits) Value seq35969 544 3e-151 >seq35969 Length=567 Score = 544 bits (602), Expect = 3e-151 Identities = 361/401 (90%), Gaps = 0/401 (0%) Strand=Plus/Plus Query 1575 GAATTCGAATATGTTTATAGAACTGAATCTGTTTGCAAAGAATCAATACAACCCAAGCGA 1634 ||||||||||||||||||| |||||||||| ||| ||||||||||||||||||| ||||| Sbjct 166 GAATTCGAATATGTTTATAAAACTGAATCTATTTCCAAAGAATCAATACAACCCGAGCGA 225 Query 1635 CACTCGCAACAACTGGAAGAGAGCAACGATCAGGATGAAAGTGGACCTTCCGGACAACAG 1694 || ||| ||||| ||||||||||| |||||||| ||||||||||||||||||||| |||| Sbjct 226 CAGTCGGAACAATTGGAAGAGAGCGACGATCAGAATGAAAGTGGACCTTCCGGACGACAG 285 Query 1695 TCGTCACGCCTACCAACTAAAAGAGATAATAGATGCGCAGATGTCCCGCATGGAAGATCA 1754 | || || |||||| ||||||| ||||||||||| |||||||||||||||||| | || Sbjct 286 CAGACAAGCTTACCAAATAAAAGAAATAATAGATGCACAGATGTCCCGCATGGAAAACCA 345 Query 1755 TCCAGAAACGGAAACCCAGTCGAAAAGTTCGTGGAGCAATTCAAACTCAGGCCAACATGG 1814 ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct 346 TCCAGAAACGGAAACCCAGTCGAAAAGTTCGTGGAACAATTCAAGCTCAGGCCAACATGG 405 Query 1815 CCCTTGGAACACATATTAGACACCAAGGATTGGCTTGAAAGTGAATGGGGTACATATATA 1874 ||||||||||||||||||||||| ||||||||| | |||||||||||| ||||||| ||| Sbjct 406 CCCTTGGAACACATATTAGACACAAAGGATTGGATGGAAAGTGAATGGAGTACATACATA 465 Query 1875 GCTAGTGACAAACAAATACAGCGAACATTTCAAATACTTATGAAAATAACTATGAATATG 1934 || ||||||||||||||||| ||||||||||||||| | |||||||| |||||||||||| Sbjct 466 GCAAGTGACAAACAAATACAACGAACATTTCAAATATTAATGAAAATTACTATGAATATG 525 Query 1935 ACCTACAGTGATTTAAAAATGCTCTATCAGAATGAACACAC 1975 || || ||| | ||||||||||||||||||||||| || Sbjct 526 ACTTATCATGAACTCAAAATGCTCTATCAGAATGAACATAC 566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 16130113010910