Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uroleptopsis_20citrina_20[genbank_20GCA_5F001653735.1_202016-05-31] 42,418 sequences; 32,347,234 total letters Query= NC_018399.1 Length=5012 Score E Sequences producing significant alignments: (Bits) Value seq35969 576 4e-161 >seq35969 Length=567 Score = 576 bits (638), Expect = 4e-161 Identities = 369/402 (92%), Gaps = 0/402 (0%) Strand=Plus/Plus Query 1581 GAATTCGAATATGTTTATAGAACTGAATCTATTTCCAAAGAGTCAATACAACCCGAGCGA 1640 ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| Sbjct 166 GAATTCGAATATGTTTATAAAACTGAATCTATTTCCAAAGAATCAATACAACCCGAGCGA 225 Query 1641 CAGTCGCAACAATTGGAAGAGGGCAACAATCAGAATGAAAGTGGACCTTCCGGACGACAG 1700 |||||| |||||||||||||| || || |||||||||||||||||||||||||||||||| Sbjct 226 CAGTCGGAACAATTGGAAGAGAGCGACGATCAGAATGAAAGTGGACCTTCCGGACGACAG 285 Query 1701 CCGTCAAGCGTACCAAATAAAAGAGATAATAGATGCACAGATGTCCCGCATGGAAAATCA 1760 | | ||||| |||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct 286 CAGACAAGCTTACCAAATAAAAGAAATAATAGATGCACAGATGTCCCGCATGGAAAACCA 345 Query 1761 TCCCGAAACGGAAACCCAGTCGAAAAATTCGTGGAACAATTCAAACTCCGGCCAACATGG 1820 ||| |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct 346 TCCAGAAACGGAAACCCAGTCGAAAAGTTCGTGGAACAATTCAAGCTCAGGCCAACATGG 405 Query 1821 CCCCTGGAACACATTTTAGATACAAAAGATTGGCTAGAAAGTGAATGGGGTACATATATA 1880 ||| |||||||||| ||||| ||||| |||||| | |||||||||||| ||||||| ||| Sbjct 406 CCCTTGGAACACATATTAGACACAAAGGATTGGATGGAAAGTGAATGGAGTACATACATA 465 Query 1881 GCTAGTGATAAACAAATACAACGAACATTCCAAATATTAATGAAAATTACAATGAATATG 1940 || ||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct 466 GCAAGTGACAAACAAATACAACGAACATTTCAAATATTAATGAAAATTACTATGAATATG 525 Query 1941 ACTTACAGTGAACTAAAAATGCTTTATCAAAATGAACATACA 1982 ||||| |||||| |||||||| ||||| |||||||||||| Sbjct 526 ACTTATCATGAACTCAAAATGCTCTATCAGAATGAACATACA 567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15919010996490