Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uroleptopsis_20citrina_20[genbank_20GCA_5F001653735.1_202016-05-31] 42,418 sequences; 32,347,234 total letters Query= NC_018450.1 Length=5053 Score E Sequences producing significant alignments: (Bits) Value seq35969 540 3e-150 >seq35969 Length=567 Score = 540 bits (598), Expect = 3e-150 Identities = 361/402 (90%), Gaps = 0/402 (0%) Strand=Plus/Plus Query 1591 GAATACGAATATGTTTATAGAACTGAATCTATATCCAAAGAATCAGTACAACCCGAGCGA 1650 |||| |||||||||||||| |||||||||||| |||||||||||| |||||||||||||| Sbjct 166 GAATTCGAATATGTTTATAAAACTGAATCTATTTCCAAAGAATCAATACAACCCGAGCGA 225 Query 1651 CAGTCGCAACAACTGGAAGAGAGCAACTATCAGAATGAAAGTGGACCTTCCGGGCAACAG 1710 |||||| ||||| ||||||||||| || ||||||||||||||||||||||||| | |||| Sbjct 226 CAGTCGGAACAATTGGAAGAGAGCGACGATCAGAATGAAAGTGGACCTTCCGGACGACAG 285 Query 1711 CCGTCACGCTTACCAAATAAAAGAGATAATAGATGCTCAGATGTCCCGCATGGAAAATCA 1770 | | || ||||||||||||||||| ||||||||||| |||||||||||||||||||| || Sbjct 286 CAGACAAGCTTACCAAATAAAAGAAATAATAGATGCACAGATGTCCCGCATGGAAAACCA 345 Query 1771 TCCAGAAACGGAAACACAGTCGAAAAATTCGTGGAACAATTCAAACTCAGGCCAACATGG 1830 ||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||| Sbjct 346 TCCAGAAACGGAAACCCAGTCGAAAAGTTCGTGGAACAATTCAAGCTCAGGCCAACATGG 405 Query 1831 CCCTTGGAACACATATTAGACACAAAAGATTGGCTAGAAAGTGAATGGTGTACATATATT 1890 |||||||||||||||||||||||||| |||||| | |||||||||||| ||||||| || Sbjct 406 CCCTTGGAACACATATTAGACACAAAGGATTGGATGGAAAGTGAATGGAGTACATACATA 465 Query 1891 GCAGGTGACAAACAAATACAACGCACATTTCAGATACTTATGAAAATAACTATGAATATG 1950 ||| ||||||||||||||||||| |||||||| ||| | |||||||| |||||||||||| Sbjct 466 GCAAGTGACAAACAAATACAACGAACATTTCAAATATTAATGAAAATTACTATGAATATG 525 Query 1951 ACTTTTGAAGAATTAAGAATGCTTTACCAAAATGAAAATACA 1992 |||| | | ||| | | |||||| || || |||||| ||||| Sbjct 526 ACTTATCATGAACTCAAAATGCTCTATCAGAATGAACATACA 567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 16050150126660