Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uroleptopsis_20citrina_20[genbank_20GCA_5F001653735.1_202016-05-31] 42,418 sequences; 32,347,234 total letters Query= NC_023842.1 Length=5006 Score E Sequences producing significant alignments: (Bits) Value seq35969 589 7e-165 >seq35969 Length=567 Score = 589 bits (652), Expect = 7e-165 Identities = 371/401 (93%), Gaps = 0/401 (0%) Strand=Plus/Plus Query 1584 GAATTCGAATATGTTTATAGAACTGAATCTATTTCCAAAGAATCAATACAACCCGAGCGA 1643 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 166 GAATTCGAATATGTTTATAAAACTGAATCTATTTCCAAAGAATCAATACAACCCGAGCGA 225 Query 1644 CAGTCGCAACAATTGGAAGAGAGCAACGATCAGGATGAAAGTGGACCTTCCGGACGACAG 1703 |||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct 226 CAGTCGGAACAATTGGAAGAGAGCGACGATCAGAATGAAAGTGGACCTTCCGGACGACAG 285 Query 1704 CCGCCCAGCTTACCAACTAAAAGAGATAATAGATGCACAGATGTCCCGCATGGAAAATCA 1763 | | | |||||||||| ||||||| |||||||||||||||||||||||||||||||| || Sbjct 286 CAGACAAGCTTACCAAATAAAAGAAATAATAGATGCACAGATGTCCCGCATGGAAAACCA 345 Query 1764 TCCAGAAACGGAAACCCAGTCGAAAAGTTCGTGGAACAATTCAAACTCAGGCCAACATGG 1823 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 346 TCCAGAAACGGAAACCCAGTCGAAAAGTTCGTGGAACAATTCAAGCTCAGGCCAACATGG 405 Query 1824 CCCCTGGAACACATACTAGACACAAAGGATTGGCTAGAAAGTGAATGGGGTACGTACATA 1883 ||| ||||||||||| ||||||||||||||||| | |||||||||||| |||| |||||| Sbjct 406 CCCTTGGAACACATATTAGACACAAAGGATTGGATGGAAAGTGAATGGAGTACATACATA 465 Query 1884 GCAAGTGACAAACAAATACAAAGAACATTCCAAATACTTATGAAAATAACAATGAATATG 1943 ||||||||||||||||||||| ||||||| |||||| | |||||||| || ||||||||| Sbjct 466 GCAAGTGACAAACAAATACAACGAACATTTCAAATATTAATGAAAATTACTATGAATATG 525 Query 1944 ACCTATGATGAACTAAAAATGCTATACCAAAATGAACACAC 1984 || ||| ||||||| |||||||| || || |||||||| || Sbjct 526 ACTTATCATGAACTCAAAATGCTCTATCAGAATGAACATAC 566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15899819904270