Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20healyi_20[genbank_20GCA_5F000826305.1_202015-01-07] 26,188 sequences; 75,318,243 total letters Query= NC_007856.1 Length=5486 Score E Sequences producing significant alignments: (Bits) Value seq1843 1835 0.0 seq6471 167 8e-38 >seq1843 Length=4743 Score = 1835 bits (2034), Expect = 0.0 Identities = 2580/3591 (72%), Gaps = 137/3591 (4%) Strand=Plus/Plus Query 468 TAATCGAAGAGTTAGACGAATGCTACAACGTGCTCGGACAACTTGATATTAATAACACTA 527 |||| || || || | |||||||||| |||||| |||||||||||||||||||||| Sbjct 520 TAATGGATGAATTGGCACAATGCTACAATGTGCTCCCCCAACTTGATATTAATAACACTA 579 Query 528 TAGACCACAAACCTATCGGTAACGCCAAATGGGACTTAATGTATGAAAAACCTGTCTATA 587 |||||||| || || ||| |||||| ||| | | || || | || Sbjct 580 TAGACCACCGCCCCGAAGGGGACGAAAAATGGTTTTTAGAGAACGAGAAGACGGTT---- 635 Query 588 AACACTGGTATG-----AACTGGTATCAAAACGACCCCTTAAATCAATCAGAGAGGACTA 642 || | | | || | |||| | |||| || ||||| || | || || || Sbjct 636 -ACGCAGTTTTGCCGCAAGCTGGCTGCTGAACGCCCTCTTAAGGATATTCGCGATGAGTA 694 Query 643 CAACTATGCAAAGGCTAAGGGTACTAAAGATGAGTGCTCGAAAATCCTTGAGGAATCCAC 702 || || | || || |||| ||| |||||||| || | | | || |||| ||||| Sbjct 695 TAATTACCCCAAAAAGAAAGGTATTAAGGATGAGTGTTCAAGATTGCTGGAGGCCTCCAC 754 Query 703 CATGAAATCCCGCCGTGGCTTTACCGTTCAGAGATTGATGAATGCTATGCGTACTGCCCA 762 |||||||| || | |||||| | ||||| | ||||||||||| ||||| || || Sbjct 755 TATGAAATCGCGTAGAGGCTTTGCTATTCAGCGTTTGATGAATGCAATGCGACAGGCTCA 814 Query 763 CACTGATGGCTGGTATGTTGTATTCGATACTCTCACCTTAGCTGATGATCGTATTA-AGG 821 ||||||| |||| | | || || || |||||||| || ||||| || || |||| ||| Sbjct 815 TGCTGATGGTTGGTTTATCGTTTTTGACACTCTCACGTTGGCTGACGACCG-ATTAGAGG 873 Query 822 ACTTCTATGCTAACCCCAATGCTCTTCGTGACTATTTCCGTGATATTGGCCGTATGGTTC 881 || |||| ||| ||||||||| | ||||||||||| ||||||||||| |||||||||| Sbjct 874 CGTTTTATGATAATCCCAATGCTTTGCGTGACTATTTTCGTGATATTGGTCGTATGGTTC 933 Query 882 TCACTGCCGAGGGTCGTTCGGTCCATGATTCATCTTCGGACTGCTATCAGTACTTTTGTG 941 | ||||||||||||| || |||||||| | |||||||||||||| ||||||| Sbjct 934 TTGCTGCCGAGGGTCGCAAGGCTAATGATTCACACGCCGACTGCTATCAGTATTTTTGTG 993 Query 942 TGCCTGAGTATGGCACCCAGC--ATGGCCGTTTACACTTTCACGCAGTGCATCTTATGCG 999 ||||||||||||| | |||| |||||||| | || || || || ||||| ||||||| Sbjct 994 TGCCTGAGTATGGTA--CAGCTAATGGCCGTCTTCATTTCCATGCGGTGCACTTTATGCG 1051 Query 1000 CACACTTCCTTTGGGTTCTCTCGACCCTAACTTTGGTAAGCTGGTGCGTACTAATCGGCA 1059 ||||||||| ||| | |||||||| |||||| | ||| || | | || || Sbjct 1052 GACACTTCCTACAGGTAGCGTTGACCCTAATTTTGGTCGTCGGGTACGCAATCGCCGCCA 1111 Query 1060 AATAAATAGCTTGCAAAACACATGGCCTTATGGTTACTCTATGCCCATCGCAGTCCGGTA 1119 |||||||||||||||| || ||||||||||||||| ||||||||||||||| || || Sbjct 1112 GTTAAATAGCTTGCAAAATACGTGGCCTTATGGTTACAGTATGCCCATCGCAGTTCGCTA 1171 Query 1120 TTCTCAGGATGCTTTCTCTCGCGCTGGATGGCTCTGGCCTGTCGATACAAAGGGTGAACC 1179 | ||||| ||||| || || |||| ||| | |||||||| ||| | || ||||| || Sbjct 1172 CACGCAGGACGCTTTTTCACGTTCTGGTTGGTTGTGGCCTGTTGATGCTAAAGGTGAGCC 1231 Query 1180 CCTTAAATCCACCTCGTATATGGCTGTAGGCTTCTACGTTGCTAAATACGTTAATAAAAA 1239 |||||| | ||| ||||||||||| || ||||| || |||||||||||||| ||||| Sbjct 1232 GCTTAAAGCTACCAGTTATATGGCTGTTGGTTTCTATGTGGCTAAATACGTTAACAAAAA 1291 Query 1240 ATCTGATGTTGACATAGCCGCAAAAGGCTTAGGGAATCAAAAATGGAACGCTACATTAAA 1299 || ||| | ||| | || || ||||| |||| | || |||||||| || |||| Sbjct 1292 GTCAGATATGGACCTTGCTGCTAAAGGTCTAGGAGCTAAAGAATGGAACAACTCACTAAA 1351 Query 1300 AACGCAGATGGCTCTTTTACCAAAGAAACTATTTCGAATTCGAATGAGCCGCAACTTCGG 1359 ||| || || | || | || ||||| || || |||| ||||||||||||||||||| Sbjct 1352 AACCAAGCTGTCGCTACTTCCCAAGAAGCTGTTCAGAATCAGAATGAGCCGCAACTTCGG 1411 Query 1360 GATGAAACTACTCCCAATGACGACGCTGACCGCGGAGTGTTTAATCCAACTGACCCAAGT 1419 ||||||| | ||| ||||||| | ||| || ||||||| ||||||||||| ||| | | Sbjct 1412 GATGAAAATGCTCACAATGACAAATCTGTCCACGGAGTGCTTAATCCAACTTACCAAGCT 1471 Query 1420 GGGTTACGACGTGACCCCGTTCAACAACATCTTGAAGCAGAACGCCAAGAAAGAGCTACG 1479 ||||||||||| ||| ||||||||| | || |||||||||||||| || | |||| | | Sbjct 1472 GGGTTACGACGCGACGCCGTTCAACCAGATATTGAAGCAGAACGCAAAAAGAGAGATGAG 1531 Query 1480 ATTGAGGCTGGCAAAGCAATCTGTAGCCGACGTTTTGGAGGCGCAACCTGTGACGACCAA 1539 ||||||||||| ||| |||||||||||||||||| |||||||||||||||||| || Sbjct 1532 ATTGAGGCTGGGAAAAGTTACTGTAGCCGACGTTTTGGCGGCGCAACCTGTGACGACAAA 1591 Query 1540 TCTGCTAAAATTCATGCGCAATTTGACCCGAACAATCGGAGCGTCCAGCCTACAGAGTTT 1599 |||||| ||||| |||||| || || || || || | |||| ||| |||||||| Sbjct 1592 TCTGCTCAAATTTATGCGCGCTTCGATAAAAATGATTGGCGTATCCAACCTGCAGAGTTT 1651 Query 1600 TATCGCTTCAATGACGCAGAAATTAGCAAATACGGATATTTCTGATGAAACTAAAAACTA 1659 ||||||||| ||||||||||| ||| || | |||||||||||||||| | ||||| || Sbjct 1652 TATCGCTTCCATGACGCAGAAGTTAACACTTTCGGATATTTCTGATGAGTCGAAAAATTA 1711 Query 1660 CGTTACTAATGCAGGAATTGCTGTTGCTGACTTACGACTTAAATCGAAGTGGACTGCTGG 1719 || ||| ||||||||| || |||| |||||| |||||||||||||||||||||| Sbjct 1712 TCTTGATAAAGCAGGAATTACTACTGCTTGTTTACGAATTAAATCGAAGTGGACTGCTGG 1771 Query 1720 TGGAAAATGAAGAACTTCAATCTCAACTTAAAGAACTCGAGGGCGTCTTACTTCGCAACC 1779 ||||||||| || ||| | || ||| | |||||| |||||||| || ||| Sbjct 1772 CGGAAAATGAGAAAATTCGACCTATCCTTGCGCAGCTCGAGAAGCTCTTACTTTGCGACC 1831 Query 1780 TTTCGCCATCATCTCAACG-TGGTAGCAAAGACTGACGCGCTTGATGAAGAAAAATGGCT 1838 ||||||||||| || |||| | | |||| ||||||||| | ||||| || || ||||| Sbjct 1832 TTTCGCCATCAACT-AACGATTCTGTCAAAAACTGACGCGTTGGATGAGGAGAAGTGGCT 1890 Query 1839 CAATATGATGGGCGCTCTTCTTAAGGACTGGTTCCGCTATGAACAACATTTCGTACATGG 1898 |||||| | ||| | | | ||||||||||| | ||||| |||||| || ||||| Sbjct 1891 TAATATGCTTGGCACGTTCGTCAAGGACTGGTTTAGATATGAGTCACATTTTGTTCATGG 1950 Query 1899 CAAAGAATCAATGCTTGACATTCTAAATGAACGTGGCCTATTATCCACCTTGCCAAATG- 1957 | ||| || | |||||||| |||| || ||||| || ||| | | | ||| Sbjct 1951 TAGAGATTCTCTTGTTGACATTTTAAAAGAGCGTGGATTACTAT---CTGAGTCCGATGC 2007 Query 1958 -GCTTAAC--TTACAAAGGAATCAAAAATGA---AAGCAAATGAGAACGCAGTAGCCTTT 2011 | | ||| || | | || || |||| ||| | ||| | | ||| || Sbjct 2008 TGTTCAACCACTAATAGGTAAGAAATCATGAGTCAAGTTACTGAACAATCCGTACGTTTC 2067 Query 2012 CAAACCGCTATTGCCTCCATCAAACTTATTCAGGCATCTTCTGTTCTTGACCTGACTGAG 2071 || |||||| | ||||| || || || |||||||| ||| | ||| | || | || || Sbjct 2068 CAGACCGCTTTGGCCTCTATTAAGCTCATTCAGGCTTCTGCCGTTTTGGATTTAACCGAA 2127 Query 2072 GACGATTTCGAATTCTTAACTCGTGACCGTGTATGGATTGCAACTGACCGCTCCCGTGCT 2131 || |||||||| || | || || || || |||||||| ||||||||||| |||||| Sbjct 2128 GATGATTTCGATTTTCTGACGAGTAACAAAGTTTGGATTGCTACTGACCGCTCTCGTGCT 2187 Query 2132 CGCCGCGCTATTGAGGCTTGCGTTTATGGAACTCTGGACTTTGTGGGATACCCTCGCTTT 2191 || ||| ||||||||||||||||||| || ||||||||||| ||||||||||||||| Sbjct 2188 CGTCGCTGCGTTGAGGCTTGCGTTTATGGTACGCTGGACTTTGTAGGATACCCTCGCTTT 2247 Query 2192 CCTGCTCCTATTGAGTTTATTGCTGCCGTCATTGCTTATTATGTTCATCCCGTTAACATT 2251 ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 2248 CCTGCTCCTGTTGAGTTTATTGCTGCCGTCATTGCTTATTATGTTCATCCCGTCAACATT 2307 Query 2252 CAAACGGCATGTCTTATTATGGAAGGCGCTGAATTCACCGAAAACATCATTAATGGTGTC 2311 |||||||| ||||| || ||||||||||||||||| || |||||||| |||||||| ||| Sbjct 2308 CAAACGGCCTGTCTCATCATGGAAGGCGCTGAATTTACGGAAAACATTATTAATGGCGTC 2367 Query 2312 GATGCCCCGGTTAAAGCCGCTGAACTCTTCGCGTTTACCTTGCGTGTACGCGCCGGAAAC 2371 || |||||||||||||||||| | |||||||||||||||||||||||||| |||||| Sbjct 2368 GAGCGTCCGGTTAAAGCCGCTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAAC 2427 Query 2372 ACTGAGCTTATTACTTACGCAGAAAACAATGCGCGTGAAAAACTGCGCGCTCAAGGAGTG 2431 ||||| || ||||| |||||||| | || | |||| ||||| | || || |||||||| Sbjct 2428 ACTGACGTTCTTACTGACGCAGAAGAAAACGTGCGTCAAAAATTACGTGCAGAAGGAGTG 2487 Query 2432 ATG-GATGTC------TAAAAAATCTATTCGC---CGCTCTGGT---------------- 2465 ||| ||||| ||||||| | | || ||| ||||| Sbjct 2488 ATGTAATGTCTAAAGGTAAAAAACGTTCTGGCGCTCGCCCTGGTCGTCCGCAGCCGTTGC 2547 Query 2466 -----------GGCAAATCTAAAGGTGCTCGCCTCTGGTATGTTGGCGGCACACAATTCT 2514 ||||| |||||| ||||| || |||||||| || || |||||| | Sbjct 2548 GAGGTACTAAAGGCAAGCGTAAAGGCGCTCGTCTTTGGTATGTAGGTGGTCAACAATTTT 2607 Query 2515 AATCTCTAAGGGGCTTCGGCCCCTCTATTTAAGGATACAAAATGTCTAACGTACAAACTT 2574 ||| | |||||||||||||||| || || |||||| | |||||||| | |||||| Sbjct 2608 AATTGC--AGGGGCTTCGGCCCCT-TACTTGAGGATAAATTATGTCTAATATTCAAACTG 2664 Query 2575 CCGCTGAACGTATTCCGCATGACCTCTCACATCTGGTATTCGAAGCTGGTAAAATCGGAC 2634 ||| || ||||| ||||||||||| || ||||| | ||| |||||| | || || | Sbjct 2665 GCGCCGAGCGTATGCCGCATGACCTTTCCCATCTTGGCTTCCTTGCTGGTCAGATTGGTC 2724 Query 2635 GCCTTAAAACTATCTCCTGGACTCCTGTTGTCGCTGGTGATTCTTACGAAACTGAAATGG 2694 | |||| || || || ||||| ||| ||||||| || || | ||| | || | Sbjct 2725 GTCTTATTACCATTTCAACTACTCCGGTTATCGCTGGCGACTCCTTCGAGATGGACGCCG 2784 Query 2695 TAGGCGCTATTCGTCTTTCTCCTCTCCGTCGTGGTCTGGCTGTCGACTCTCGCGTCGACG 2754 | |||||| | ||||||||||| | |||||||| || ||| | |||||| || ||| Sbjct 2785 TTGGCGCTCTCCGTCTTTCTCCATTGCGTCGTGGCCTTGCTATTGACTCTACTGTAGACA 2844 Query 2755 TCTTTACTTTCTATATCCCTCATCGTCATGTCTATGGTCAACAATGGATTGACTTTATGA 2814 | |||||||| ||| ||||||||||||| || |||||| |||| |||||| | || |||| Sbjct 2845 TTTTTACTTTTTATGTCCCTCATCGTCACGTTTATGGTGAACAGTGGATTAAGTTCATGA 2904 Query 2815 AGACTGGCGTTAACGCTACTCCTCTGGC-TCCGGTAACTTGTTCCTCTGGCT---GGGAT 2870 || ||| ||||| || |||||||| | | | |||| | |||| | || Sbjct 2905 AGGATGGTGTTAATGCCACTCCTCTCCCGACTGTTAAC----ACTACTGGTTATATTGAC 2960 Query 2871 TCTGCTGCCTATCTTGGCAC---TATCCCGTCAACTAATTTGAAGGTTCCTAA--ATTCC 2925 ||| || | ||||||||| || ||| || ||| || | ||||| ||| Sbjct 2961 CATGCCGCTTTTCTTGGCACGATTAACCCTGATACCAAT---AAAATCCCTAAGCATTTG 3017 Query 2926 TTCATCAATCTTATCTCAATATTTACAACAACTACTTTAAGCCGCCGTGGTCTAATGACC 2985 || ||| |||| | ||||| || |||||||| ||||| |||||||| ||||| Sbjct 3018 TT--TCAGGGTTATTTGAATATCTATAACAACTATTTTAAAGCGCCGTGGATGCCTGACC 3075 Query 2986 TCACCTATGCTAACCCATCTAATATGCCCGCTGAGGAT--TACAAATGGGGCGTTC--GT 3041 ||| | ||||||| ||||| || | | ||| | | | | ||| | Sbjct 3076 GTACCGAGGCTAACC---CTAATGAGCTTAATCAAGATGATGCTCGTTATGGTTTCCGTT 3132 Query 3042 GTCGCTAACTTAAAATCTATCTGGACCGCGCCCCTTCCTCCTGATTCATTAAC-TAAGCA 3100 | || | || |||| | || ||||| || || ||||||||||| | | | | | | Sbjct 3133 GCTGCCATCTCAAAAAC-ATTTGGACTGCTCCGCTTCCTCCTGAGAC-TGAGCTTTCTCG 3190 Query 3101 GGATATGACTACTGGCGCTACCA---CTATCGATATTATGGGCCTACAAGCTGCCTATGC 3157 | ||||| ||| |||||| |||| || |||||||| || |||||||| ||||| Sbjct 3191 CCAAATGACGACT---TCTACCACATCTATTGACATTATGGGTCTGCAAGCTGCTTATGC 3247 Query 3158 TAAACTCCACACTGAACAGGAACGTGACTATTTCATGACTCGCTACCGCGATATTATGAA 3217 ||| | || ||||| || |||||||| || |||||| || |||| ||| |||| Sbjct 3248 TAATTTGCATACTGACCAAGAACGTGATTACTTCATGCAGCGTTACCATGATGTTATTTC 3307 Query 3218 AGACTTTGGCGGTCACACCTCCTACGACGGTGATAACCGTCCTCTGCTCCTGATGCGCTC 3277 ||||| ||| | ||||| || |||| ||| ||||||||| | || | |||||||| Sbjct 3308 TTCATTTGGAGGTAAAACCTCTTATGACGCTGACAACCGTCCTTTACTTGTCATGCGCTC 3367 Query 3278 TGAATTTTGGGCCTCTGGCTATGACGTCGACGGTACTGACCAAACTTCATTGGGTCAGTT 3337 | | | ||||| ||||||||||| || || || ||||||||||| || || || ||||| Sbjct 3368 TAATCTCTGGGCATCTGGCTATGATGTTGATGGAACTGACCAAACGTCGTTAGGCCAGTT 3427 Query 3338 CTCTGGTCGCGTCCAACAAACCTTTAATCATAAAGTGCCTCGCTTCTATGTTCCTGAGCA 3397 |||||||| || ||||| |||| ||| ||| ||||| || |||| |||||||||||| Sbjct 3428 TTCTGGTCGTGTTCAACAGACCTATAAACATTCTGTGCCGCGTTTCTTTGTTCCTGAGCA 3487 Query 3398 TGGCGTAATTATGACTTTATCTGTTACTCGCTTCCCTCCTACT--CACGAAATGGAAATG 3455 |||| || | ||| | | || ||| || || |||||| || ||| || || Sbjct 3488 TGGCACTATGTTTACTCTTGCGCTTGTTCGTTTTCCGCCTACTGCGACTAAA--GAGATT 3545 Query 3456 CACTATCTCGTCGGTAAGGAATCTCTGACTTATACTGACATTGCCTGTGACCCTGCTCT- 3514 || || || || ||| | || |||||||||| || ||||| | ||||||| | | Sbjct 3546 CAGTACCTTAACGCTAAAGGTGCTTTGACTTATACCGATATTGCTGGCGACCCTGTTTTG 3605 Query 3515 TATGGCTAACCTGCCTCCGCGTGAAATTGAGGTAAAAGACCTCTTTCACTCTGCTGGT-- 3572 |||||| ||| |||| |||||||||||| | || || | || | |||| || | Sbjct 3606 TATGGC-AACTTGCCGCCGCGTGAAATTTCTATGAAGGATGTTTTCCGTTCTGGTGATTC 3664 Query 3573 -ACTGGTAAATTCAAAATTGCCGAAGGTCAATGGTATCGTACTCAGCCTGACCGCGTTGC 3631 || || || || ||||| || ||||| ||||||||| | |||| ||| | Sbjct 3665 GTCTAAGAAGTTTAAGATTGCTGAGGGTCAGTGGTATCGTTATGCGCCTTCGTATGTTTC 3724 Query 3632 CTTCC--CTTATAACGCTCTTGACGGCTTCCCTTTCTATTC-TGAACTGCCGTCTAATGA 3688 ||| ||||| || |||||| |||||||| ||| |||| |||| ||| ||| ||| Sbjct 3725 --TCCTGCTTATCACCTTCTTGAAGGCTTCCCATTC-ATTCAGGAACCGCCTTCTGGTGA 3781 Query 3689 TATTCTCGAACGTGTACTTGTTCGAACTGATAACTATGATGAAATCTTCCAGTCTATGCA 3748 | | | ||||| |||||| |||| || | ||||| | |||||||| | || Sbjct 3782 TTTGCAAGAACGCGTACTTATTCGCCACCATGATTATGACCAGTGTTTCCAGTCCGTTCA 3841 Query 3749 ACTTGCACACTGGAACATGCAAACTAAATTTAACACTACTGTATATCGTCATATGCCTAC 3808 | || ||||| | || ||||||||| || || ||||| || |||| || Sbjct 3842 GTTGTTGCAGTGGAATAGTCAGGTTAAATTTAATGTGACCGTTTATCGCAATCTGCCGAC 3901 Query 3809 CACTCGTGATGGCATCATGA---CGTCATAAAA---------------CAAAACGTTGAA 3850 |||||| ||| ||||||| ||| |||||| | |||| ||| Sbjct 3902 CACTCGCGATTCAATCATGACTTCGTGATAAAAGATTGAGTGTGAGGTTATAACGCCGAA 3961 Query 3851 CGGGTACAAATTTTAATTTGTGCCTGTTCAAGGTTGAACAAGCGAAGCGCGTTAGCTAAC 3910 |||| |||||||||||| |||| | |||||| ||||||||||||| ||| | Sbjct 3962 GCGGTAAAAATTTTAATTTTTGCCGCTGAGGGGTTGACCAAGCGAAGCGCGGTAGGTTTT 4021 Query 3911 TTACTTAAGGAAATT-CTCATGTTTCAAACTTATCTCTCTAAACATAATTC 3960 | ||| |||| || |||||||||| |||| | | ||| |||||||| Sbjct 4022 CTGCTT-AGGAGTTTAATCATGTTTCAGACTTTTATTTCTCGCCATAATTC 4071 Score = 104 bits (114), Expect = 8e-19 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 5334 ACCGCCAAGGATGTATCAAATGTCATTAGTGACGCATCTTCTGGTATTGTTGATTATTTT 5393 || || |||||| | || |||||| | | ||| || |||||||| | |||||| |||| Sbjct 24 ACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTGGTGTGGTTGATATTTTT 83 Query 5394 CGTGGCGTTGATAAAGCTGTCGCGGATACTTGGAACAATTATTTCAAAGATGGCAAATCG 5453 | ||| ||||||||||||| || |||||||||||||||| | ||||| || ||| | Sbjct 84 CATGGTATTGATAAAGCTGTTGCCGATACTTGGAACAATTTCTGGAAAGACGGTAAAGCT 143 Query 5454 GATGGGATAAGCTCAAA 5470 ||||| || |||| || Sbjct 144 GATGGTATTGGCTCTAA 160 >seq6471 Length=769 Score = 167 bits (184), Expect = 8e-38 Identities = 298/453 (66%), Gaps = 0/453 (0%) Strand=Plus/Minus Query 4784 TGCTGCTGCTAAAGGTAAGGATACGAAAGATTATCTTGCTTCTGCGTTCCCCGAACTCAA 4843 ||| |||| |||||| |||||||| |||||||||||| |||| || || || || || Sbjct 548 TGCCGCTGATAAAGGAAAGGATACTCGTGATTATCTTGCTGCTGCATTTCCTGAGCTTAA 489 Query 4844 CCCGTGGGAACGTGCTGGCGCTGGTGCTTCTTCTGCTGGAATGGTTGATGCGGGATTCCA 4903 | ||||| |||||||| |||| |||||| |||||||| |||||||| || ||||| | Sbjct 488 TGCTTGGGAGCGTGCTGGTGCTGATGCTTCCTCTGCTGGTATGGTTGACGCCGGATTTGA 429 Query 4904 AAACCAAAAGGAATTAACTCGCATGCAGCTTGACNNNNNNNNNNNNNNNNNNNNNNNNNN 4963 || ||||| || | ||| ||||| || ||| Sbjct 428 GAATCAAAAAGAGCTTACTAAAATGCAACTGGACAATCAGAAAGAGATTGCCGAGATGCA 369 Query 4964 NNNNNNNNNNNNNNNNNNNNNNNNNNNTATCCAGTCTGTTACTTCTCGGCAAAATACTAA 5023 || ||||| | ||||| || || ||||| || Sbjct 368 AAATGAGACTCAAAAAGAGATTGCTGGCATTCAGTCGGCGACTTCACGCCAGAATACGAA 309 Query 5024 GGACTCTGTGTATGCTCAAAACGAAATGCTCCAATACAACCAAAAAGAATCTATGTCACG 5083 ||| || ||||| ||||| || ||||| || | || || || |||| | || Sbjct 308 AGACCAGGTATATGCACAAAATGAGATGCTTGCTTATCAACAGAAGGAGTCTACTGCTCG 249 Query 5084 CGTTGGCGCTATTCTCGAAAACACAAGCCTCACCAAACAACAACAAACTTCTGAAATTAT 5143 ||||| ||||| | |||||||| | || |||| ||||| || ||| || ||||| Sbjct 248 CGTTGCGTCTATTATGGAAAACACCAATCTTTCCAAGCAACAGCAGGTTTCCGAGATTAT 189 Query 5144 GCGGCAAATGCTTACTCAGGCTCAAACCTCAGGTCAACACTTTACAAATGACCAAATCCA 5203 ||| |||||||||||||| |||||||| | ||||| | ||||| |||||||||||| | Sbjct 188 GCGCCAAATGCTTACTCAAGCTCAAACGGCTGGTCAGTATTTTACCAATGACCAAATCAA 129 Query 5204 AGAACTTACTCGAAAGGTCGGCGCTGATATTGA 5236 |||| | ||||| ||||| | ||||| |||| Sbjct 128 AGAAATGACTCGCAAGGTTAGTGCTGAGGTTGA 96 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17438203722420