Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20palestinensis_20[genbank_20GCA_5F000826325.1_202015- 01-07] 56,742 sequences; 103,482,825 total letters Query= NC_003287.2 Length=6407 Score E Sequences producing significant alignments: (Bits) Value seq14110 183 1e-42 >seq14110 Length=2549 Score = 183 bits (202), Expect = 1e-42 Identities = 103/104 (99%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 5812 CACTCAACCCTATCTCGGGCTATTCTTTTGATTTATAAGGGATTTTGCCGATTTCGGCCT 5871 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 249 CACTCAACCCTATCTCGGTCTATTCTTTTGATTTATAAGGGATTTTGCCGATTTCGGCCT 308 Query 5872 ATTGGTTAAAAAATGAGCTGATTTAACAAAAATTTAACGCGAAT 5915 |||||||||||||||||||||||||||||||||||||||||||| Sbjct 309 ATTGGTTAAAAAATGAGCTGATTTAACAAAAATTTAACGCGAAT 352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 20374185881848