Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20pearcei_20[genbank_20GCA_5F000826505.1_202015-01-07] 224,137 sequences; 115,614,128 total letters Query= NC_025824.1 Length=6408 Score E Sequences producing significant alignments: (Bits) Value seq40793 159 1e-35 >seq40793 Length=1476 Score = 159 bits (176), Expect = 1e-35 Identities = 115/133 (86%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 5813 CACTCACAACTAACTCGGCCTATTCTTTTGATTTATAAGGATTTTTGTCATTTTCTGCTT 5872 |||||| ||| ||||| ||||||||||||||||||||| ||||| | |||| || | Sbjct 155 CACTCAACCCTATCTCGGTCTATTCTTTTGATTTATAAGGGATTTTGCCGATTTCGGCCT 214 Query 5873 ACTGGTTAAAAAATAAGCTGATTTAACAAATATTTAACGCGAAATTTAACAAAACATTAA 5932 | |||||||||||| ||||||||||||||| |||||||||||| |||||||||| ||||| Sbjct 215 ATTGGTTAAAAAATGAGCTGATTTAACAAAAATTTAACGCGAATTTTAACAAAATATTAA 274 Query 5933 CGTTTACAATTTA 5945 || |||||||||| Sbjct 275 CGCTTACAATTTA 287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 20338984765296