Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20royreba_20[genbank_20GCA_5F000826365.1_202015-01-07] 24,098 sequences; 79,544,075 total letters Query= NC_001420.2 Length=5577 Score E Sequences producing significant alignments: (Bits) Value seq4008 1570 0.0 >seq4008 Length=4818 Score = 1570 bits (1740), Expect = 0.0 Identities = 2253/3148 (72%), Gaps = 64/3148 (2%) Strand=Plus/Minus Query 462 TAATCGAAGAATTGCAAGAATGCTATGACGTGCTCGGACAACTTGATATTAATAACACTA 521 |||| || |||||| | ||||||| | |||||| |||||||||||||||||||||| Sbjct 3114 TAATGGATGAATTGGCACAATGCTACAATGTGCTCCCCCAACTTGATATTAATAACACTA 3055 Query 522 TAGACCACAAACCCCTCGGTAATGACCATTGGAACCTCCTCTATGAAAAACCCGTATACA 581 |||||||| ||| || | || | ||| | | || || | || ||| Sbjct 3054 TAGACCACCGCCCCGAAGGGGACGAAAAATGGTTTTTAGAGAACGAGAAGACGGT-TACG 2996 Query 582 AACATTGGTATCA-GCTCGTTTCAAATCGACCCCTTAAAGATATCCGCGCCGATTACAAC 640 | || | || ||| | | | | || || ||||| ||||| |||| || || || Sbjct 2995 CAGTTTTGCCGCAAGCTGGCTGCTGAACGCCCTCTTAAGGATATTCGCGATGAGTATAAT 2936 Query 641 TATGCAAAGGCTAAGGGTGTTAAAGATGAGTGCTCAAAAATCTTGGAGGAGTCAACTATG 700 || | || || ||| |||| |||||||| |||| | | |||||| || |||||| Sbjct 2935 TACCCCAAAAAGAAAGGTATTAAGGATGAGTGTTCAAGATTGCTGGAGGCCTCCACTATG 2876 Query 701 AAGTCTCGACGTGGCTTTACCGTTCAAAGATTAATGAATGCTATGCGTACTGCCCATTCT 760 || || || | |||||| | |||| | || |||||||| ||||| || ||| || Sbjct 2875 AAATCGCGTAGAGGCTTTGCTATTCAGCGTTTGATGAATGCAATGCGACAGGCTCATGCT 2816 Query 761 AAGGGCTGGTATGTCGTATTCGATACTCTTACTCTAGCCGATGACCGCTTAAAGGATTTC 820 | || |||| | |||| || || ||||| || | || || ||||| ||| ||| || Sbjct 2815 GATGGTTGGTTTATCGTTTTTGACACTCTCACGTTGGCTGACGACCGATTAGAGGCGTTT 2756 Query 821 TATGATAATCCCAATGCTCTTCGTGACTACTTCCGTGATATTGGTCGTATGGTGCTTACT 880 |||||||||||||||||| | |||||||| || |||||||||||||||||||| ||| || Sbjct 2755 TATGATAATCCCAATGCTTTGCGTGACTATTTTCGTGATATTGGTCGTATGGTTCTTGCT 2696 Query 881 GCCGAAGGTCGCTCGGTGCATGACTCATCTTCCGACTGCTATCAGTATTTTTGTGTGCCA 940 ||||| |||||| || |||| ||| |||||||||||||||||||||||||||| Sbjct 2695 GCCGAGGGTCGCAAGGCTAATGATTCACACGCCGACTGCTATCAGTATTTTTGTGTGCCT 2636 Query 941 GAGTATGGTACACAGCACGGTCGTCTACATTTCCACGCAGTGCATCTTATGCGCACACTT 1000 |||||||||||| | || ||||| |||||||| || ||||| ||||||| |||||| Sbjct 2635 GAGTATGGTACAGCTAATGGCCGTCTTCATTTCCATGCGGTGCACTTTATGCGGACACTT 2576 Query 1001 CCTCTGGGTTCTCTGCACCCTAACTTCGGTAAGCTGGTACGCATCAATCGGCAAATAAAT 1060 ||| ||| | ||||||| || ||| | |||||||| || || ||||| Sbjct 2575 CCTACAGGTAGCGTTGACCCTAATTTTGGTCGTCGGGTACGCAATCGCCGCCAGTTAAAT 2516 Query 1061 AGCTTGCAAAACACGTGGCCTTATGGTTACTCTATGCCCATCGCAGTCCGGTACTCCCAA 1120 ||||||||||| |||||||||||||||||| ||||||||||||||| || ||| | || Sbjct 2515 AGCTTGCAAAATACGTGGCCTTATGGTTACAGTATGCCCATCGCAGTTCGCTACACGCAG 2456 Query 1121 GACGCATTCTCTCGCGCTGGCTGGCTCTGGCCTGTGGACTCAAAGGGTGAACCCCTTAAA 1180 ||||| || || || |||| ||| | |||||||| || | || ||||| || |||||| Sbjct 2455 GACGCTTTTTCACGTTCTGGTTGGTTGTGGCCTGTTGATGCTAAAGGTGAGCCGCTTAAA 2396 Query 1181 GCTACCTCGTATATGGCTGTAGGCTTCTACGTTGCTAAATACGTTAACAAAAAATCAGAT 1240 |||||| ||||||||||| || ||||| || |||||||||||||||||||| |||||| Sbjct 2395 GCTACCAGTTATATGGCTGTTGGTTTCTATGTGGCTAAATACGTTAACAAAAAGTCAGAT 2336 Query 1241 ATTGACATGGCCGTAAAAGGCCTAGGGAATAAAGAATGGAACAATTCACTCAAAACCAAA 1300 || ||| | || | ||||| ||||| ||||||||||||||| ||||| |||||||| Sbjct 2335 ATGGACCTTGCTGCTAAAGGTCTAGGAGCTAAAGAATGGAACAACTCACTAAAAACCAAG 2276 Query 1301 ATCAACCTCATACCCAAGAAAGTGTTCAGAATACGAATGTCTCGCAATTTCGGAATGAAA 1360 | || | |||||||| |||||||||| ||||| ||||| ||||| |||||| Sbjct 2275 CTGTCGCTACTTCCCAAGAAGCTGTTCAGAATCAGAATGAGCCGCAACTTCGGGATGAAA 2216 Query 1361 CTGTTATCAATGGCTCACCTGTCAGCGGAAACCCTGATGGAACTGACCCAAGTGGGTTAC 1420 || | ||||| | | ||||| |||| | | || |||| ||| | |||||||| Sbjct 2215 ATGCTCACAATGACAAATCTGTCCACGGAGTGCTTAATCCAACTTACCAAGCTGGGTTAC 2156 Query 1421 GACGTGACCCCGTTCAACAACATCTTGAAGCAGAACGCCAAGAAAGAGCTCAAATCGAGG 1480 |||| ||| ||||||||| | || |||||||||||||| || | |||| | | || |||| Sbjct 2155 GACGCGACGCCGTTCAACCAGATATTGAAGCAGAACGCAAAAAGAGAGATGAGATTGAGG 2096 Query 1481 CTGGCAAAGAAATCTGTCGCCGACGTTTTGGAGGCGCAACCTGTGACGACGAATCTGCTA 1540 |||| ||| |||| ||||||||||||| |||||||||||||||||| |||||||| Sbjct 2095 CTGGGAAAAGTTACTGTAGCCGACGTTTTGGCGGCGCAACCTGTGACGACAAATCTGCTC 2036 Query 1541 AAATTCATGCGCAATTTGACCCGAACAATCGGAGCGTCCAACCTACAGAGTTTTATCGCT 1600 ||||| |||||| || || || || || | |||||||| ||||||||||||||| Sbjct 2035 AAATTTATGCGCGCTTCGATAAAAATGATTGGCGTATCCAACCTGCAGAGTTTTATCGCT 1976 Query 1601 TCAATGACCACGAAATTAACAAGTACGGATATTTCTGATGAAACCAAAAACTACGTTGCT 1660 || ||||| ||| |||||| | |||||||||||||||| | ||||| || ||| | Sbjct 1975 TCCATGACGCAGAAGTTAACACTTTCGGATATTTCTGATGAGTCGAAAAATTATCTTGAT 1916 Query 1661 TCTGCAGGAATTGCTGTTGCTAACTTACGAATTAAATCGAAGTGGACTGCTGGTGGAAAA 1720 ||||||||| || |||| ||||||||||||||||||||||||||||| |||||| Sbjct 1915 AAAGCAGGAATTACTACTGCTTGTTTACGAATTAAATCGAAGTGGACTGCTGGCGGAAAA 1856 Query 1721 TGAGGAAATTCAATCTCAACTTAAAAAACTCGAGGTCGTCTTACTTTGCAACCTTTCGCC 1780 |||| |||||| | || ||| | |||||| ||||||||||| |||||||||| Sbjct 1855 TGAGAAAATTCGACCTATCCTTGCGCAGCTCGAGAAGCTCTTACTTTGCGACCTTTCGCC 1796 Query 1781 ATCATCTCAACG-TGCTGGCAAAAACTGACGCCCTTGACGAGGAGAAATACTTAAATATG 1839 |||| || |||| | ||| ||||||||||||| | || |||||||| | | |||||| Sbjct 1795 ATCAACT-AACGATTCTGTCAAAAACTGACGCGTTGGATGAGGAGAAGTGGCTTAATATG 1737 Query 1840 TTAGGTGCTCTCCTCAAGGACTGGTTCCGGTACGAAGAACATTTCGTGCATGGTAAACAA 1899 | || | || ||||||||||||| | || || |||||| || ||||||| | | Sbjct 1736 CTTGGCACGTTCGTCAAGGACTGGTTTAGATATGAGTCACATTTTGTTCATGGTAGAGAT 1677 Query 1900 TCAATGCTTGACATACTGAAAGAACGTGGCCTATTATCCACATCGTCAACTGACACAAAC 1959 || | ||||||| | ||||| ||||| || |||| || ||| ||| Sbjct 1676 TCTCTTGTTGACATTTTAAAAGAGCGTGGATTACTATCTGAGTCCGATGCTG--TTCAAC 1619 Query 1960 CAC--AAAGGAAACTGAAATGTCTAAATCAA---AC-GAATCTGCTGTAGCCTTTCAAAC 2013 ||| | ||| || ||||| | | |||| || ||| | ||| || || || Sbjct 1618 CACTAATAGGTAA--GAAAT-CATGAGTCAAGTTACTGAACAATCCGTACGTTTCCAGAC 1562 Query 2014 TGCTATCGCTTCTATCAAACTTATTCAAGCATCTTCTGTTCTTGACTTGACAGAGGACGA 2073 ||| | || ||||| || || ||||| || ||| | ||| | || || || || || || Sbjct 1561 CGCTTTGGCCTCTATTAAGCTCATTCAGGCTTCTGCCGTTTTGGATTTAACCGAAGATGA 1502 Query 2074 TTTTGACTTCTTAACTCGCGACCGTGTCTGGATTGCTACCGACCGTTCACGCGCTCGCCG 2133 ||| || || | || | || || ||||||||||| ||||| || || ||||| || Sbjct 1501 TTTCGATTTTCTGACGAGTAACAAAGTTTGGATTGCTACTGACCGCTCTCGTGCTCGTCG 1442 Query 2134 -TGCTATCGAGGCTTGCGTATATGGAACACTGGACTTTGTCGGGTATCCTCGCTTTCCTG 2192 ||| | ||||||||||| ||||| || ||||||||||| || || ||||||||||||| Sbjct 1441 CTGC-GTTGAGGCTTGCGTTTATGGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTG 1383 Query 2193 CTCCTGTTGAGTTTATTTCTGCCGTCATTGCTTATTACGTTCATCCCGTTAACATCCAAA 2252 ||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||| |||| Sbjct 1382 CTCCTGTTGAGTTTATTGCTGCCGTCATTGCTTATTATGTTCATCCCGTCAACATTCAAA 1323 Query 2253 CCGCCTGTCTCATCATGGAAGGTGCTGAGTTTACCGAAAACATCGTCAATGGTGTTGAAC 2312 | |||||||||||||||||||| ||||| ||||| |||||||| | ||||| || || | Sbjct 1322 CGGCCTGTCTCATCATGGAAGGCGCTGAATTTACGGAAAACATTATTAATGGCGTCGAGC 1263 Query 2313 GCCCCGTTAAAGCCTCTGAACTGTTCGCCTTCACTCTTCTTGTTCGCGCCGGAAACAAAG 2372 | || ||||||||| ||||| ||||||| || || | | ||| ||||| ||||||| | Sbjct 1262 GTCCGGTTAAAGCCGCTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAACACTG 1203 Query 2373 ATCTTATCGGTCACGCTGAAACAAACATCCGTGAACAGTTACGCGCTCAAGGTGTCATGT 2432 | || | | |||| ||| |||| | ||| || | ||||| || |||| || |||| Sbjct 1202 ACGTTCTTACTGACGCAGAAGAAAACGTGCGTCAAAAATTACGTGCAGAAGGAGTGATGT 1143 Query 2433 AAAGACCTTTGATTTTATCGTCTTCACTTTTAAGGAGTT----ATGTAATGAAAAAATCA 2488 || | | | | || | || || | | || | | Sbjct 1142 AATG--------TCTAAAGGTAAAAAACGTTCTGGCGCTCGCCCTGGTCGTCCGCAGCCG 1091 Query 2489 ATTCGCCGCTCTGGTGGCAAATCTAAGGGTGCCCGTCTCTGGTATGTAGGCGGAACACAA 2548 | || | || ||||| ||| || || ||||| ||||||||||| || |||| Sbjct 1090 TTGCGAGGTACTAAAGGCAAGCGTAAAGGCGCTCGTCTTTGGTATGTAGGTGGTCAACAA 1031 Query 2549 TACTAATCTTTTATGTGGGACCGCGGTCCCACTCTATTTAAGGATACAAAAATGTCTAAC 2608 | ||| || | ||| | ||| ||| || || |||||| || |||||||| Sbjct 1030 TTTTAA--TTGCA---GGGGCTTCGGCCCC---TTACTTGAGGATA-AATTATGTCTAAT 980 Query 2609 GTTCAAACATCTGCGGACCGTGTACCTCATGACTTATCTCACCTTGTCTTTGAGGCTGGT 2668 ||||||| || || ||| | || |||||| | || || |||| ||| |||||| Sbjct 979 ATTCAAACTGGCGCCGAGCGTATGCCGCATGACCTTTCCCATCTTGGCTTCCTTGCTGGT 920 Query 2669 AAAATTGGCCGCCTCAAAACTATCTCTTGGACGCCTGGTGGTGCTGGTGACTCTTTCGAG 2728 | ||||| || || | || || || || || | | ||||| ||||| |||||| Sbjct 919 CAGATTGGTCGTCTTATTACCATTTCAACTACTCCGGTTATCGCTGGCGACTCCTTCGAG 860 Query 2729 TGTGATATGGTTGGCGCTATTCGTCTGTCCCCTCTTCGTCGTGGCCTCGCTGTTGACTCA 2788 || ||||||||| | ||||| || || | ||||||||||| ||| ||||||| Sbjct 859 ATGGACGCCGTTGGCGCTCTCCGTCTTTCTCCATTGCGTCGTGGCCTTGCTATTGACTCT 800 Query 2789 CGCGTTGATATCTTTCCTTTCTATATCCCACACCGTCATATCTACGGTCAGCAGTGGATT 2848 || || || ||| |||| ||| |||| || ||||| | || ||| | ||||||||| Sbjct 799 ACTGTAGACATTTTTACTTTTTATGTCCCTCATCGTCACGTTTATGGTGAACAGTGGATT 740 Query 2849 AACTTTATGAAGGATGGCGTTAATGCCTCCCCTCTTCCTCCTGTTACATGCTCCTCTGGT 2908 || || ||||||||||| ||||||||| | ||||| || |||||| | | ||||| Sbjct 739 AAGTTCATGAAGGATGGTGTTAATGCCACTCCTCTCCCGACTGTTA---ACACTACTGGT 683 Query 2909 T---GGGACTCTGCTGCTTATCTCGGTACCATTCCGTCTTCTACCCTTAAAGTGCCTAAA 2965 | ||| ||| |||| ||| || || ||| || |||| |||| | ||||| Sbjct 682 TATATTGACCATGCCGCTTTTCTTGGCACGATTAACCCTGATACCAATAAAATCCCTAAG 623 Query 2966 TTCTTACATCAGGGCTATCTGAATATTTATAATAACTACTTCAAACCGCCTTGGTCTGAT 3025 || |||||| ||| ||||||| ||||| ||||| || ||| |||| || ||| Sbjct 622 CATTTGTTTCAGGGTTATTTGAATATCTATAACAACTATTTTAAAGCGCCGTG----GAT 567 Query 3026 GACTTAACTTAC----GCTAACCCATCCAATATGCCT--TC-TGAGGATTATAAATGGGG 3078 | || | | ||| ||||||| | ||| || | || || ||| | | || Sbjct 566 GCCTGACCGTACCGAGGCTAACC---CTAATGAGCTTAATCAAGATGATGCTCGTTATGG 510 Query 3079 CGTACGTGTCGCTAACCTTAAATCTATCTGGACTGCGCCACTTCCACCGGATACTCGTAC 3138 | ||| | | || ||| || |||||||| || ||||| || || ||| Sbjct 509 TTTCCGTTGCTGCCATCTCAAAAACATTTGGACTGCTCCGCTTCCTCCTGAGACTGAGCT 450 Query 3139 ATCTGAAAACATGACTACTGGTACATCCACTATTGACATTATGGGCCTTCAAGCCGCATA 3198 ||| | ||||| ||| ||| | |||||||||||||||| || ||||| || || Sbjct 449 TTCTCGCCAAATGACGACTTCTACCACATCTATTGACATTATGGGTCTGCAAGCTGCTTA 390 Query 3199 CGCTAAATTACATACGGAACAGGAACGTGATTACTTCATGACCCGTTACCGTGACATTAT 3258 ||||| || ||||| || || |||||||||||||||||| ||||||| ||| |||| Sbjct 389 TGCTAATTTGCATACTGACCAAGAACGTGATTACTTCATGCAGCGTTACCATGATGTTAT 330 Query 3259 GAAAGAGTTCGGCGGTCATACATCCTATGATGGTGACAATCGTCCTCTTCTGCTCATGCG 3318 || || ||| | || || ||||| | |||||| |||||| | || ||||||| Sbjct 329 TTCTTCATTTGGAGGTAAAACCTCTTATGACGCTGACAACCGTCCTTTACTTGTCATGCG 270 Query 3319 CTCTGAATTTTGGGCATCTGGCTATGACGTAGACGGTACTGACCAATCTTCTCTCGGTCA 3378 |||| | | ||||||||||||||||| || || || ||||||||| | || | || || Sbjct 269 CTCTAATCTCTGGGCATCTGGCTATGATGTTGATGGAACTGACCAAACGTCGTTAGGCCA 210 Query 3379 ATTCTCTGGTCGCGTTCAGCAGACCTTCAATCACAAAGTCCCACGCTTCTATGTTCCTGA 3438 || |||||||| ||||| ||||||| || || || || || |||| ||||||||| Sbjct 209 GTTTTCTGGTCGTGTTCAACAGACCTATAAACATTCTGTGCCGCGTTTCTTTGTTCCTGA 150 Query 3439 GCATCGCGTAATTATGACTCTGGCGGTTACTCGCTTTCCGCCTACT--CATGAAATGGAA 3496 |||| || || | ||||| ||| || ||| |||||||||||| | ||| || Sbjct 149 GCATGGCACTATGTTTACTCTTGCGCTTGTTCGTTTTCCGCCTACTGCGACTAAA--GAG 92 Query 3497 ATGCACTATCTTGTAGGTAAAGAAAACTTAACTTATACCGATATTGCTTGTGACCCTGCA 3556 || || || ||| | ||||| || |||||||||||||||||| | ||||||| Sbjct 91 ATTCAGTACCTTAACGCTAAAGGTGCTTTGACTTATACCGATATTGCTGGCGACCCTGTT 32 Query 3557 CTG-ATGGCTAACCTGCCACCTCGTGAA 3583 || ||||| ||| |||| || |||||| Sbjct 31 TTGTATGGC-AACTTGCCGCCGCGTGAA 5 Score = 163 bits (180), Expect = 1e-36 Identities = 176/233 (76%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 5095 ACATCACGCGAAAATACTAAGGATACTGTCTATGCTCAAAATGAAATGCTCGCGTATAAC 5154 || |||||| | ||||| || || || ||||| |||||||| ||||| || ||| | Sbjct 3898 ACTTCACGCCAGAATACGAAAGACCAGGTATATGCACAAAATGAGATGCTTGCTTATCAA 3839 Query 5155 CAAAAAGAGTCTATGTCACGCGTTGGCGCTATTCTCGAAAACACAAGCCTCACCAAACAG 5214 || || ||||||| | ||||||| ||||| | |||||||| | || |||| || Sbjct 3838 CAGAAGGAGTCTACTGCTCGCGTTGCGTCTATTATGGAAAACACCAATCTTTCCAAGCAA 3779 Query 5215 CAACAAACTTCTGAAATTATGCGGCAAATGCTTACTCAGGCTCAAACCGCAGGTCAATAT 5274 || || ||| || |||||||| |||||||||||||| |||||||| || ||||| ||| Sbjct 3778 CAGCAGGTTTCCGAGATTATGCGCCAAATGCTTACTCAAGCTCAAACGGCTGGTCAGTAT 3719 Query 5275 TTTACAAATGACCAAATCAAGGAGCTTACGAGAAAAGTTGGTGCTGATATTGA 5327 ||||| |||||||||||||| || | || | || ||| ||||||| |||| Sbjct 3718 TTTACCAATGACCAAATCAAAGAAATGACTCGCAAGGTTAGTGCTGAGGTTGA 3666 Score = 154 bits (170), Expect = 5e-34 Identities = 325/482 (67%), Gaps = 17/482 (4%) Strand=Plus/Minus Query 4563 TATGTTTGGCTCTATCGCTGGCGGTATCGCCTCCGCACTTGCCGGAGGCCTTATGGGTAA 4622 ||||||||| |||| ||||||||||| || || || ||||| || ||| ||| ||| Sbjct 4445 TATGTTTGGTGCTATTGCTGGCGGTATTGCTTCTGCTCTTGCTGGTGGCGCCATGTCTAA 4386 Query 4623 ATTATTTGGCGGCGGTCAGTCCGCCGACTCTACCGGAATCCAAGGCAACGTCCTTGCTTC 4682 ||| ||||| |||||||| |||| ||| || || ||||| | || |||||| | Sbjct 4385 ATTGTTTGGAGGCGGTCAAAAAGCCGCCTCCGGTGGCATTCAAGGTGATGTGCTTGCTAC 4326 Query 4683 CGACAACAATGTTGTAGGTGCTAATGATGCTGGTATTAAATCTGCTATTCAGGGCTCTAC 4742 ||| |||||| |||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 4325 CGATAACAATACTGTAGGCATGGGTGATGCTGGTATTAAATCTGCCATTCAAGGCTCTAA 4266 Query 4743 TGTCCCTAACTCTCAGGAAGCTGCTCCCT-CTGCTATCTCTGGCATCCTTGCCGACTCTG 4801 ||| |||||| || | || || | ||||| | | | ||||| | || | ||| Sbjct 4265 TGTTCCTAACCCTGATGAGGCCG-TCCCTAGTTTTGTTTCTGGTGCTATGGCTAAAGCTG 4207 Query 4802 G-CAAGCA-----------TGCGCTCTCGTCTCTTACCAATGCTGGTGCAAATAAACTCA 4849 | ||| | | || | | || || ||| | | | |||| | Sbjct 4206 GTAAAGGACTTCTTGAAGGTACGTTGCAGGCTGGCACTTCTGCCGTTTCTGATAAGTTGC 4147 Query 4850 TGGAGGCTGTCGGCCTTTCT---AAGTCTGCCTCTGACAAGGGCAAGGACACAAAAGACT 4906 | || || || ||| | ||||||||| |||| || || ||||| || || | Sbjct 4146 TTGATTTGGTTGGACTTGGTGGCAAGTCTGCCGCTGATAAAGGAAAGGATACTCGTGATT 4087 Query 4907 ATCTCGCCGCCGCATTCCCCGAGCTCAACCCATGGGAACGTGCTGGTGCTGGCGCTTCTA 4966 |||| || || ||||| || ||||| || | ||||| ||||||||||||| ||||| Sbjct 4086 ATCTTGCTGCTGCATTTCCTGAGCTTAATGCTTGGGAGCGTGCTGGTGCTGATGCTTCCT 4027 Query 4967 GTCCAGGCATGCAAGACGCTGGCTTCCAAAATCAGAAGGAGCTAACCAAGATGCAGCTTG 5026 | | || ||| ||||| || || | ||||| || ||||| || || ||||| || | Sbjct 4026 CTGCTGGTATGGTTGACGCCGGATTTGAGAATCAAAAAGAGCTTACTAAAATGCAACTGG 3967 Query 5027 AC 5028 || Sbjct 3966 AC 3965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17729725710940