Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_015586.1 Length=5819 Score E Sequences producing significant alignments: (Bits) Value seq153 1276 0.0 >seq153 Length=135117 Score = 1276 bits (1414), Expect = 0.0 Identities = 1140/1424 (80%), Gaps = 12/1424 (1%) Strand=Plus/Minus Query 1 ATGGTCGGTGATCGCGCGGTGCTGGCCGGGTCGGGACTCCCCTCGTCTAACAGGGGAGTC 60 |||| || ||| ||||||||||||| || |||||||||||||||||||||||||||||| Sbjct 7510 ATGGCCGTTGAACGCGCGGTGCTGGAGGGCTCGGGACTCCCCTCGTCTAACAGGGGAGTC 7451 Query 61 AGTGAATTCAGGAACCCCGAGGGAACCCTGACGGTCGGCATTGACTGGTTCTCCGCTTCC 120 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 7450 AGTGAATTCAGGAACGAGACGGGAACCCTGACGGTCGGCATTGACTGGTTCTCCGCTTCG 7391 Query 121 ATCGATCTGCGCGCAGCGCTGGACGAGGTTGCGTTCCGTGATGGCGACAGTTTCG-AAGA 179 | ||||| ||| || || ||||| | ||| || || || | || |||| Sbjct 7390 GTAGATCTTTTCGCCGCCCTTCGGGAGGTCGACTTCACCGAAGGTGAGA----CGCAAGA 7335 Query 180 GG---TCCGCCAGTGGATCGAGTTCTCCCCGGACAATGCCCGCATTGCGGCCTTGCAGGT 236 || | || ||||||||||| | |||| || |||||| | |||||| | ||||| Sbjct 7334 GGAAATGCGGCAGTGGATCGACGCTAGCGCGGAAAACGCCCGCGTCGCGGCCCTACAGGT 7275 Query 237 GTTCTGCTGGTTCTTCGCCGGTCTGGGTCTTGAACTGGATGAAACGGCCGGCGGCGGCCG 296 ||||||||||||||||||||| ||||| ||||| |||| | || |||| || || Sbjct 7274 GTTCTGCTGGTTCTTCGCCGGGCTGGGCCTTGAGTTGGACCTGGCAGCGAGCGGTGGTCG 7215 Query 297 CTTCTACACGTGGCGAATCAAGATCATCGACGCGGCCAAGAAGTTCGTCGGGATGATCGA 356 ||||||| |||||| | |||||| || | || || || |||||||||| |||||||| Sbjct 7214 CTTCTACCTGTGGCGCGTAAAGATCCTCAATGCCGCAAAAGAGTTCGTCGGCATGATCGA 7155 Query 357 ACTGGGTGGCGAAAAGTGCCGCCGCGCAGATGGTACGTATACCGCCCGCATCGAGCTAAC 416 ||||| || ||| ||||||| || || ||||| || |||||||| ||||||||| | || Sbjct 7154 GCTGGGCGGAGAAGAGTGCCGGCGTGCGGATGGAACCTATACCGCACGCATCGAGTTGAC 7095 Query 417 CGGTGATGGATGCAAGGCGATTAGCGCAGCGCGCTGCGGCCATGCGCAGCGGTGGCTGGA 476 ||| ||||||||| | || ||||||||||||||||||||||| ||||||||||||| Sbjct 7094 CGGCACCGGATGCAAGTCCGTTGGCGCAGCGCGCTGCGGCCATGCGAAGCGGTGGCTGGA 7035 Query 477 GCTTCGAGCGAAGCTCGAAAGCTGCGCCGGGAGGATCACCCGTGTCGATGTGTGCGCCGA 536 |||||||||||||||||||||||||||||| |||||||||||||| || |||||||| || Sbjct 7034 GCTTCGAGCGAAGCTCGAAAGCTGCGCCGGAAGGATCACCCGTGTTGACGTGTGCGCTGA 6975 Query 537 TGACCTGGTGGGCGATTACCCGTTGCGCATGGCACAGAAGTGGTACGCCAATGGCGACTT 596 |||| || | ||||| |||||||||||| |||| || |||||||| ||| |||| || || Sbjct 6974 TGACTTGATCGGCGACTACCCGTTGCGCCTGGCTCAAAAGTGGTATGCCGATGGTGAGTT 6915 Query 597 CGACAACCGTGGTCAGCGCCCCAAGGCGCAGCTGGTGGACGACTACGACAGCGGCGACGG 656 |||||||||||| |||||||| || ||||||||||| |||||||||||||| |||||||| Sbjct 6914 CGACAACCGTGGACAGCGCCCTAAAGCGCAGCTGGTTGACGACTACGACAGTGGCGACGG 6855 Query 657 CAAGACGTTCTATGTGGGCGGCAAGAAGTCGGAGAAGCAACTGCGCGTCTACGAGAAGGG 716 ||||||| ||||||||||||| ||||||||||| ||||| |||||||||||||||||||| Sbjct 6854 CAAGACGCTCTATGTGGGCGGGAAGAAGTCGGAAAAGCAGCTGCGCGTCTACGAGAAGGG 6795 Query 717 CAGGGAACAAGGCGACAAGAGTTCGCCGTGGGTGCGCTATGAGGCGCAGTTCCGCAACTC 776 |||||| || |||||||||| || || ||||| |||||||| |||||||||||| || Sbjct 6794 CAGGGAGCAGGGCGACAAGAACTCACCATGGGTTCGCTATGAAGCGCAGTTCCGCGCGTC 6735 Query 777 CAATCGCAAGGAACTGCCGCTCGACATTCTGCGTGATCCGGCCTCCTACCTGCTCGGGGC 836 |||||| ||||| || || |||||| |||| || || || || || |||||||| || || Sbjct 6734 CAATCGGAAGGAGCTTCCTCTCGACGTTCTTCGGGACCCTGCGTCATACCTGCTGGGCGC 6675 Query 837 TTATCCGGTCCTGTCCTTTCTGCGCTGTGTTGCTACGCGCATCGAAATCACGAAAGCCGC 896 ||||||||| || |||||||| || || || || |||||||| || ||||||||||| Sbjct 6674 GTATCCGGTCTTGAACTTTCTGCATTGCGTGGCAACACGCATCGACATTACGAAAGCCGC 6615 Query 897 CGTTGAGGCGACGTGGAAGAGCGTCCGTCGCCACATCCGCCGCCAGTACGGCGCGGCCCT 956 || |||||||| |||||||||| || | ||| | ||||||||||||||||| |||| Sbjct 6614 GGTGGAGGCGACCTGGAAGAGCGCGCGCAGACACTTGCGCCGCCAGTACGGCGCCACCCT 6555 Query 957 CAATTTCATCGCCAAGAACTGCCCAGACGATCAGGCATTGCGGGCGGTAATCGAATCCTG 1016 ||||||| | |||||||| |||| | || | ||| ||| || || ||| |||| Sbjct 6554 GGCTTTCATCAGCCGCAACTGCCCTGACGCTGAGTCGTTGAAGGCAGTCATTGAAACCTG 6495 Query 1017 CACTTCGCCATCGCTGCCGAAGTGGGTCACAGGTGACACAGCAGCGCACTGGCCCGAAAT 1076 ||| |||||| |||||||| ||||| ||||| || |||||||||| ||||||||||| Sbjct 6494 CACCTCGCCAAAGCTGCCGAGGTGGGCAACAGGAGAAACAGCAGCGCTATGGCCCGAAAT 6435 Query 1077 CGCGGCCGTACAGCCAACCTCAAAGGGGTAA--CAA--CACATGAGCATCAAGGTCACCG 1132 ||||| |||| | | |||||||||||||||| ||| ||| | |||||||||||||| Sbjct 6434 CGCGGGCGTAAACCAAACCTCAAAGGGGTAACGCAATGGACAACATCATCAAGGTCACCG 6375 Query 1133 TCCTCAAGAACGAAATTGACGAACGCGGCGGCAGCTTCAAGAACGACGCTGGCGAGAACG 1192 | || | | || || || || ||||||| |||||||||||| ||| ||| Sbjct 6374 TGCTGGATTCGCAGATCGATGAGCGTGGCGGCACGTTCAAGAACGACCGCAACGAAGACG 6315 Query 1193 TGGAATACACCACCCGCAAGCAGAAGGCCAAGCTGGAAACCGGTGGTTTTGCCTACCCGT 1252 | | |||| ||||||||||||||||| ||||||||||||||| || || || ||||| | Sbjct 6314 TCAAGTACAGCACCCGCAAGCAGAAGGGCAAGCTGGAAACCGGCGGCTTCGCGTACCCCT 6255 Query 1253 TCGACGTGCGCCTGGACAAGGGTCAGCCGGGCTACCCCGAGGGCGAGTACGAGCTCGATG 1312 |||| |||||||||||||| || ||||| | ||| ||| |||||| ||||| || || | Sbjct 6254 TCGATGTGCGCCTGGACAACGGCCAGCCCGCTTACGCCGTGGGCGAATACGAACTGGACG 6195 Query 1313 TTGAATCCATGTTGCAGGTCAACAAGGGCGTTGCCTCGCTGAGCAAGTTCACCGTGCTGC 1372 ||| ||||| ||||||||||||||||||| | | ||||||||||||||||| ||| Sbjct 6194 TTGCCGCCATGGCCCAGGTCAACAAGGGCGTTGTCACCCTGAGCAAGTTCACCGTTTTGC 6135 Query 1373 GCCCGCTGCAGAAGGCTGCGCCACGCCCGGCAGCGCAGGCCTGA 1416 ||| |||| ||| | || || ||| |||| || ||||||| Sbjct 6134 GCCAGCTGGGCAAGCCCGCACCGCGCTCGGCCTCGGCGGCCTGA 6091 Score = 96.9 bits (106), Expect = 1e-16 Identities = 121/158 (77%), Gaps = 10/158 (6%) Strand=Plus/Minus Query 4680 CGCGGCCG--CT--CTCCATCATCCGCCGCCATTCCTGCGCC-TGC-GCAGCAGTGAGCG 4733 |||||||| || |||||||||| ||||||||||| |||| || |||| || |||| Sbjct 2208 CGCGGCCGGGCTTCCTCCATCATCAGCCGCCATTCCCGCGCGATGTTGCAG--GTCAGCG 2151 Query 4734 ACAGCCAGGCCAGATCTTCGGGCAGCAACTC-GCGGCCTTCGGGTGTGACCAGTCGGCCA 4792 || |||||||| ||| | ||| ||| | | ||| || ||||||| || |||| Sbjct 2150 ACCACCAGGCCATATCGACAGGCT-CAAGGCTGTAGCCCTCAGGTGTGAACATGTGGCCG 2092 Query 4793 GCCTTAAACGAAAAACCGGCCCAAGGGCCGGTTAGGTT 4830 |||| ||| ||||||||||||||||||||||||||| Sbjct 2091 GCCTGAAAGCCAAAACCGGCCCAAGGGCCGGTTAGGTT 2054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 18506709402120