Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_021862.1 Length=8576 Score E Sequences producing significant alignments: (Bits) Value seq1891 188 4e-44 seq6417 187 1e-43 >seq1891 Length=1650 Score = 188 bits (208), Expect = 4e-44 Identities = 382/557 (69%), Gaps = 25/557 (4%) Strand=Plus/Plus Query 6903 ACGTTGGCGGCCGTGCCCACTACGGTGTGCACCAGCCCCGAGTCCGCATCCACACCAATG 6962 |||||||| ||||||||||| ||| ||||||||| ||||| || |||| ||||| ||| Sbjct 993 ACGTTGGCCGCCGTGCCCACCACGCTGTGCACCAAGCCCGACTCATCATCGACACCGATG 1052 Query 6963 TGCGCTTTCATGCCGAAATGCCACTGGTTACCTTTCTTGGTCTGGTGCATCTCTGGGTCA 7022 ||||| ||||||||||| | |||||||||| ||||||||||| ||||| || ||||| Sbjct 1053 TGCGCCTTCATGCCGAAGTAGTACTGGTTACCCTTCTTGGTCTGATGCATTTCCGGGTCG 1112 Query 7023 CGCTTGCCGCTGCCATTCTTGGTCGAACTGGGCGCGGCAATCAGCGAGGCGTCGACCACC 7082 ||||| ||| |||||||||||||| ||||| ||||||| ||| ||||| | | Sbjct 1113 CGCTTACCGTCCTTGTTCTTGGTCGAACTCGGCGCATTGATCAGCGTGGCATCGACGATC 1172 Query 7083 GTGCACGTCTTTGAGCA--GGTAGCCCT---TCGCACTGAGTTGCGCGTTGACGGTCTGC 7137 |||| ||| | ||| | |||||| |||| | || | || | |||| | | || Sbjct 1173 GTGC----CTTGGCGCAGCGACAGCCCTCGGTCGCCCAGA-TAGC-CATTGA-TGACAGC 1225 Query 7138 AGAAATTGC-TCGGCTAACTGGTGTCGCTCCAGCAAGTGCCGAAAGCGCAGAATGCTGAC 7196 | || | |||||| | ||| ||||||||| | || ||| || ||| || Sbjct 1226 CAAGATGCCGGCGGCTAGTTCGTGCTTCTCCAGCAAACGACGGAAGTTGAGGATGGTGGT 1285 Query 7197 CCGGTCCGGCAGTCGGCTTATGCCTCCCAGCCCCGCGAATTGCCGATACAACGGCACGTC 7256 || || | || | | | |||||||||||| || || | | || Sbjct 1286 TTCATCGGGGATACGCTCCAAG---CTCAGCCCCGCGAACTGGCGCAGGATGGTGGTCTC 1342 Query 7257 GTACAGCGCCTCTTCCATCGCCACGTCCGTCAGCCCGAACCATTGCTGCAGAAAGTGGAT 7316 ||||||||||||||||||||| || | |||||||| | |||| | ||| | Sbjct 1343 GTACAGCGCCTCTTCCATCGCTGGATCGCTGTAACCGAACCAGTTTTGCATCAGGTGCAC 1402 Query 7317 GCGCAGCATCGTTTCGACTGGAAACGGCTTCCGACCCGTCGCCTTGACC----GGCGCAT 7372 ||||||||||| | ||| | | | |||| |||||| ||| || || Sbjct 1403 GCGCAGCATCGCCATCAGCGGATAGGCCGGACGAC----CGCCTTCACCCTTGGGATAAT 1458 Query 7373 GCGGCGCTATCAACGCCAAAAAACGCCTGCCACGGCACCACACGTTCCATCTCATCCAGA 7432 ||||| | ||||| || | |||| ||| |||||||||||| || |||||||| ||| Sbjct 1459 GCGGCTCGATCAAGGCAATCAAAC-CCTTCCACGGCACCACCCGATCCATCTCGATCAGG 1517 Query 7433 AATACCTGCTTGCGCGT 7449 || | || ||||| || Sbjct 1518 AACAACTCTTTGCGGGT 1534 >seq6417 Length=1149 Score = 187 bits (206), Expect = 1e-43 Identities = 602/910 (66%), Gaps = 32/910 (4%) Strand=Plus/Plus Query 6553 GCGCATCATCCACAGATTGCTCAGGGCAAACAGCGTGTGTAATTGCTGTGTGTTCTTTAT 6612 |||| ||||||||| || ||| || ||||| || | |||| ||||| || Sbjct 189 GCGCGCCATCCACAGGTTCGACAGAGCGAACAGTGTCACCAGTTGCGCCGTGTTTTTGGC 248 Query 6613 CAAGCCTCGATAGCGCACCCTCAAGTGCCCAAACTGGCGCTTGATGACTCGGAACGGATG 6672 |||||| ||| |||||||| | || || |||||||||||||| || ||||||||||| Sbjct 249 CAAGCCGCGAAAGCGCACCTTGGTGTAACCGAACTGGCGCTTGATTACCCGGAACGGATG 308 Query 6673 TTCCACGCGGGCACGAATGCGCGCCTTGACCCGCTCCAGCTCATCGACGAGC---GCACC 6729 || || ||| || | | |||||| || || | || || || | || Sbjct 309 CTCGACCTTGGCGCGCACCTGAGCCTTGGCCTTTTCAATCTTG-CGCTTGGCTTTGTACA 367 Query 6730 CGACACGGTGCTCTTGTCCAAGGCGCGGCGTTTGCCCGGGCGTAATGCCACATGCCAACG 6789 |||| ||| ||| || | | ||| ||||| ||||| ||||| Sbjct 368 G--CACGCTGCGCTTATCGAGTTTTTTGTAGGTGCTGCGGCGTGCCGCCACCTGCCAGAT 425 Query 6790 CACCTTCAACTCCTGCAC-CTCTTCGCGCTTGTCGATGCCCTGATAGCCGGCATCGCCGA 6848 || |||| |||| || ||| ||||| |||| || ||||| |||||| || Sbjct 426 AAC-TTCACGTCCTTCATGCTCGGGCCGCTTTTCGACACCGGTGTAGCCTGCATCGGCGC 484 Query 6849 ACACGTCGGCCTCCTTGCCATGCACCAATGCGTTGCGCTGGCGTCACGTCGTTGACGTTG 6908 | || || || | |||||||| |||| || |||| || || || || ||| Sbjct 485 AGACCACGTTTTCGTCGCCATGCAGCAATTTGTCCACCTGG-GTGACATCCGCCACATTG 543 Query 6909 GCGGCCGTGCCCACTACGGTGTGCACCAGCCCCGAGTCCGCATCCACACCAATGTGCGCT 6968 || ||||||||||||||| |||||||||| ||||| || |||| | || ||||| || Sbjct 544 GCCGCCGTGCCCACTACGCTGTGCACCAGACCCGATTCGTCATCGGCGCCGATGTGGGCC 603 Query 6969 TTCATGCCGAAATGCCACTGGTTACCTTTCTTGGTCTGGTGCATCTCTGGGTCACGCTTG 7028 |||||||| |||| ||||||| || ||||||||||||||||| || ||||| |||||| Sbjct 604 TTCATGCCAAAATAATACTGGTTTCCCTTCTTGGTCTGGTGCATTTCCGGGTCGCGCTTG 663 Query 7029 CCGCTGCCATTCTTGGTCGAACTGGGCGCGGCAATCAGCGAGGCGTCGACCACCGTGCAC 7088 ||| |||||||||||||||||||| ||||||| || ||||| | |||| | Sbjct 664 CCGTCCTTGTTCTTGGTCGAACTGGGCGCATTGATCAGCGTTGCATCGACGATGGTGCCC 723 Query 7089 -GTCTTTGAG-CAGGTAGCCCTTCGCACTGAGTTGCGCGTTGACGGTCTGCAGAAATTGC 7146 | | | | |||| | | |||| | || | || | |||| | | || || ||| Sbjct 724 TGGCGCAGCGACAGGCCG-CGGTCGCCCAGA-TAGC-CATTGA-TGACAGC-GAGGATGC 778 Query 7147 --TCGGCTAACTGGTGTCGCTCCAGCAAGTGCCGAAAGCGCAGAATGCTGACCCGGTCCG 7204 | || | || |||| |||||||||| | || ||| |||||| || ||| | Sbjct 779 CGGCCGCCAGCTCGTGTTTCTCCAGCAAGCGGCGGAAGTTGAGAATGGTGGTTTCGTCGG 838 Query 7205 GCAGTCGGCTTATGCCTCCCAGCCCCGCGAATTGCCGATACAACGGCACGTCGTACAGCG 7264 | | | ||| | | |||||| || || || || | || |||||||||| Sbjct 839 GGA-TGCGCTCCAGGTT--CAGCCCGGCAAACTGGCGCAGGATCGTGGTTTCGTACAGCG 895 Query 7265 CCTCTTCCATCGCCACGTCCGTCAGCCCGAACCATTGCTGCAGAAAGTGGATGCGCAGCA 7324 | || |||||||| || | |||||||| | |||||| | || | ||||||| Sbjct 896 CTTCCTCCATCGCTGGATCGCTGTAGCCGAACCAGTTCTGCAGCAGATGCACACGCAGCA 955 Query 7325 TCG-TTTCGACTGGAAACGGCTTCCGACCCGTCGCCTTGAC----CGGCGCATGCGGCGC 7379 ||| || || || | || ||| | | | |||| || ||| ||| ||| | Sbjct 956 TCGCCATCAACGGGTA--GG---CCGGACGGCCACCTTCACCTTTCGGATAATGTGGCTC 1010 Query 7380 TATCAACGCCAAAAAACGCCTGCCACGGCACCACACGTTCCATCTCATCCAGAAATACCT 7439 ||||| | ||| || ||| |||||||||||| || |||||||| ||| || | || Sbjct 1011 GATCAAAG-CAATCAAGCCCTTCCACGGCACCACCCGATCCATCTCGATCAGGAACAACT 1069 Query 7440 GCTTGCGCGT 7449 |||||| || Sbjct 1070 CCTTGCGGGT 1079 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 27319321891120