Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= NC_001954.1 Length=8454 Score E Sequences producing significant alignments: (Bits) Value seq3041 747 0.0 >seq3041 Length=715 Score = 747 bits (828), Expect = 0.0 Identities = 468/503 (93%), Gaps = 1/503 (0%) Strand=Plus/Minus Query 6553 AACTGGCAGAAGCAGAAACGCAAAATACAGTGTCTGCATTCCCGTATCGCAAATATCCGC 6612 |||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||| Sbjct 707 AACTGGCAGAAGCAGAAACGCAAAATACAGCGACTGCATTCCTGTATCGCAAATATCCGC 648 Query 6613 AGAGACTACCTTCATAAAGTCACAACGACCGTCAGCAAAAACCACGCAATGATAGTCATT 6672 || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 647 AGGGACTACCTTCACAAAGTCACAACGACCGTCAGCAAAAACCACGCAATGATAGTCATT 588 Query 6673 GAGGATTTGAAGGTCAGCAACATGTCAAAGTCAGCAGCGGGTACGGTCAGCCAGCCGGGG 6732 |||||||||||||||||||||||||||||||||||||||||||| | | || | Sbjct 587 GAGGATTTGAAGGTCAGCAACATGTCAAAGTCAGCAGCGGGTACAACAAATGAACCCAAG 528 Query 6733 CGCAATGTCCGGGCAAAATCAGGTTTAAACCGTTCGATACTGGATCAGGGCTGGTATGAA 6792 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 527 GATAATGTCCGGGCAAAATCAGGTTTAAACCGTTCGATACTGGATCAGGGCTGGTATGAA 468 Query 6793 ATGCGCCGCCAGCTTGAGTACAAACAGCTCTGGCGTGGAGGTCAGGTGCTTGCTGTTCCG 6852 || ||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||| Sbjct 467 ATACGCCGCCAGCTTGCGTACAAGCAGCTCTGGCGTGGTGGTCAGGTGCTTGCTGTTCCG 408 Query 6853 CCAGCGTACACAAGCCAGCGTTGCGCGTGCTGTGGTCATACAGCGAAAGAAAACCGCCTG 6912 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| Sbjct 407 CCAGCGTACACAAGCCAGCGTTGCGTGTGCTGTGGTCATACAGCGAAAGAAAATCGCCTG 348 Query 6913 TCACAAAGTCAATTCAGATGCCAGGTATGTGGATATACAGCGAACGCCGATGTAAATGGC 6972 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 347 TCACAAAGTAAATTCAGATGCCAGGTATGTGGATATACAGCGAACGCCGATGTAAATGGC 288 Query 6973 GCTCGTAACATTTTAGCGGCGGGGCACGCCGTACTTGCCTGTGGAGGGACGATGCAGTCA 7032 |||||||||||||||||||| || ||||||| ||||||||||||| || | |||||||| Sbjct 287 GCTCGTAACATTTTAGCGGC-GGNNACGCCGTTCTTGCCTGTGGAGAGATGGTGCAGTCA 229 Query 7033 GACCGCCCGTTGAAGCAGGAACC 7055 | |||| |||||||||||||||| Sbjct 228 GGCCGCTCGTTGAAGCAGGAACC 206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 26933355812760