Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20equiperdum_20[genbank_20GCA_5F001457755.2_202016-12- 15] 2,026 sequences; 26,228,029 total letters Query= NC_001420.2 Length=5577 Score E Sequences producing significant alignments: (Bits) Value seq289 1577 0.0 >seq289 Length=5418 Score = 1577 bits (1748), Expect = 0.0 Identities = 2302/3225 (71%), Gaps = 68/3225 (2%) Strand=Plus/Plus Query 462 TAATCGAAGAATTGCAAGAATGCTATGACGTGCTCGGACAACTTGATATTAATAACACTA 521 |||| || |||||| | ||||||| | |||||| |||||||||||||||||||||| Sbjct 1226 TAATGGATGAATTGGCACAATGCTACAATGTGCTCCCCCAACTTGATATTAATAACACTA 1285 Query 522 TAGACCACAAACCCCTCGGTAATGACCATTGGAACCTCCTCTATGAAAAACCCGTATACA 581 |||||||| ||| || | || | ||| | | || || | || ||| Sbjct 1286 TAGACCACCGCCCCGAAGGGGACGAAAAATGGTTTTTAGAGAACGAGAAGACGGT-TACG 1344 Query 582 AACATTGGTATCA-GCTCGTTTCAAATCGACCCCTTAAAGATATCCGCGCCGATTACAAC 640 | || | || ||| | | | | || || ||||| ||||| |||| || || || Sbjct 1345 CAGTTTTGCCGCAAGCTGGCTGCTGAACGCCCTCTTAAGGATATTCGCGATGAGTATAAT 1404 Query 641 TATGCAAAGGCTAAGGGTGTTAAAGATGAGTGCTCAAAAATCTTGGAGGAGTCAACTATG 700 || | || || ||| |||| |||||||| |||| | | |||||| || |||||| Sbjct 1405 TACCCCAAAAAGAAAGGTATTAAGGATGAGTGTTCAAGATTGCTGGAGGCCTCCACTATG 1464 Query 701 AAGTCTCGACGTGGCTTTACCGTTCAAAGATTAATGAATGCTATGCGTACTGCCCATTCT 760 || || || | |||||| | |||| | || |||||||| ||||| || ||| || Sbjct 1465 AAATCGCGTAGAGGCTTTGCTATTCAGCGTTTGATGAATGCAATGCGACAGGCTCATGCT 1524 Query 761 AAGGGCTGGTATGTCGTATTCGATACTCTTACTCTAGCCGATGACCGCTTAAAGGATTTC 820 | || |||| | |||| || || ||||| || | || || ||||| ||| ||| || Sbjct 1525 GATGGTTGGTTTATCGTTTTTGACACTCTCACGTTGGCTGACGACCGATTAGAGGCGTTT 1584 Query 821 TATGATAATCCCAATGCTCTTCGTGACTACTTCCGTGATATTGGTCGTATGGTGCTTACT 880 |||||||||||||||||| | |||||||| || |||||||||||||||||||| ||| || Sbjct 1585 TATGATAATCCCAATGCTTTGCGTGACTATTTTCGTGATATTGGTCGTATGGTTCTTGCT 1644 Query 881 GCCGAAGGTCGCTCGGTGCATGACTCATCTTCCGACTGCTATCAGTATTTTTGTGTGCCA 940 ||||| |||||| || |||| ||| |||||||||||||||||||||||||||| Sbjct 1645 GCCGAGGGTCGCAAGGCTAATGATTCACACGCCGACTGCTATCAGTATTTTTGTGTGCCT 1704 Query 941 GAGTATGGTACACAGCACGGTCGTCTACATTTCCACGCAGTGCATCTTATGCGCACACTT 1000 |||||||||||| | || ||||| |||||||| || ||||| ||||||| |||||| Sbjct 1705 GAGTATGGTACAGCTAATGGCCGTCTTCATTTCCATGCGGTGCACTTTATGCGGACACTT 1764 Query 1001 CCTCTGGGTTCTCTGCACCCTAACTTCGGTAAGCTGGTACGCATCAATCGGCAAATAAAT 1060 ||| ||| | ||||||| || ||| | |||||||| || || ||||| Sbjct 1765 CCTACAGGTAGCGTTGACCCTAATTTTGGTCGTCGGGTACGCAATCGCCGCCAGTTAAAT 1824 Query 1061 AGCTTGCAAAACACGTGGCCTTATGGTTACTCTATGCCCATCGCAGTCCGGTACTCCCAA 1120 ||||||||||| |||||||||||||||||| ||||||||||||||| || ||| | || Sbjct 1825 AGCTTGCAAAATACGTGGCCTTATGGTTACAGTATGCCCATCGCAGTTCGCTACACGCAG 1884 Query 1121 GACGCATTCTCTCGCGCTGGCTGGCTCTGGCCTGTGGACTCAAAGGGTGAACCCCTTAAA 1180 ||||| || || || |||| ||| | |||||||| || | || ||||| || |||||| Sbjct 1885 GACGCTTTTTCACGTTCTGGTTGGTTGTGGCCTGTTGATGCTAAAGGTGAGCCGCTTAAA 1944 Query 1181 GCTACCTCGTATATGGCTGTAGGCTTCTACGTTGCTAAATACGTTAACAAAAAATCAGAT 1240 |||||| ||||||||||| || ||||| || |||||||||||||||||||| |||||| Sbjct 1945 GCTACCAGTTATATGGCTGTTGGTTTCTATGTGGCTAAATACGTTAACAAAAAGTCAGAT 2004 Query 1241 ATTGACATGGCCGTAAAAGGCCTAGGGAATAAAGAATGGAACAATTCACTCAAAACCAAA 1300 || ||| | || | ||||| ||||| ||||||||||||||| ||||| |||||||| Sbjct 2005 ATGGACCTTGCTGCTAAAGGTCTAGGAGCTAAAGAATGGAACAACTCACTAAAAACCAAG 2064 Query 1301 ATCAACCTCATACCCAAGAAAGTGTTCAGAATACGAATGTCTCGCAATTTCGGAATGAAA 1360 | || | |||||||| |||||||||| ||||| ||||| ||||| |||||| Sbjct 2065 CTGTCGCTACTTCCCAAGAAGCTGTTCAGAATCAGAATGAGCCGCAACTTCGGGATGAAA 2124 Query 1361 CTGTTATCAATGGCTCACCTGTCAGCGGAAACCCTGATGGAACTGACCCAAGTGGGTTAC 1420 || | ||||| | | ||||| |||| | | || |||| ||| | |||||||| Sbjct 2125 ATGCTCACAATGACAAATCTGTCCACGGAGTGCTTAATCCAACTTACCAAGCTGGGTTAC 2184 Query 1421 GACGTGACCCCGTTCAACAACATCTTGAAGCAGAACGCCAAGAAAGAGCTCAAATCGAGG 1480 |||| ||| ||||||||| | || |||||||||||||| || | |||| | | || |||| Sbjct 2185 GACGCGACGCCGTTCAACCAGATATTGAAGCAGAACGCAAAAAGAGAGATGAGATTGAGG 2244 Query 1481 CTGGCAAAGAAATCTGTCGCCGACGTTTTGGAGGCGCAACCTGTGACGACGAATCTGCTA 1540 |||| ||| |||| ||||||||||||| |||||||||||||||||| |||||||| Sbjct 2245 CTGGGAAAAGTTACTGTAGCCGACGTTTTGGCGGCGCAACCTGTGACGACAAATCTGCTC 2304 Query 1541 AAATTCATGCGCAATTTGACCCGAACAATCGGAGCGTCCAACCTACAGAGTTTTATCGCT 1600 ||||| |||||| || || || || || | |||||||| ||||||||||||||| Sbjct 2305 AAATTTATGCGCGCTTCGATAAAAATGATTGGCGTATCCAACCTGCAGAGTTTTATCGCT 2364 Query 1601 TCAATGACCACGAAATTAACAAGTACGGATATTTCTGATGAAACCAAAAACTACGTTGCT 1660 || ||||| ||| |||||| | |||||||||||||||| | ||||| || ||| | Sbjct 2365 TCCATGACGCAGAAGTTAACACTTTCGGATATTTCTGATGAGTCGAAAAATTATCTTGAT 2424 Query 1661 TCTGCAGGAATTGCTGTTGCTAACTTACGAATTAAATCGAAGTGGACTGCTGGTGGAAAA 1720 ||||||||| || |||| ||||||||||||||||||||||||||||| |||||| Sbjct 2425 AAAGCAGGAATTACTACTGCTTGTTTACGAATTAAATCGAAGTGGACTGCTGGCGGAAAA 2484 Query 1721 TGAGGAAATTCAATCTCAACTTAAAAAACTCGAGGTCGTCTTACTTTGCAACCTTTCGCC 1780 |||| |||||| | || ||| | |||||| ||||||||||| |||||||||| Sbjct 2485 TGAGAAAATTCGACCTATCCTTGCGCAGCTCGAGAAGCTCTTACTTTGCGACCTTTCGCC 2544 Query 1781 ATCATCTCAACG-TGCTGGCAAAAACTGACGCCCTTGACGAGGAGAAATACTTAAATATG 1839 |||| || |||| | ||| ||||||||||||| | || |||||||| | | |||||| Sbjct 2545 ATCAACT-AACGATTCTGTCAAAAACTGACGCGTTGGATGAGGAGAAGTGGCTTAATATG 2603 Query 1840 TTAGGTGCTCTCCTCAAGGACTGGTTCCGGTACGAAGAACATTTCGTGCATGGTAAACAA 1899 | || | || ||||||||||||| | || || |||||| || ||||||| | | Sbjct 2604 CTTGGCACGTTCGTCAAGGACTGGTTTAGATATGAGTCACATTTTGTTCATGGTAGAGAT 2663 Query 1900 TCAATGCTTGACATACTGAAAGAACGTGGCCTATTATCCACATCGTCAACTGACACAAAC 1959 || | ||||||| | ||||| ||||| || |||| || ||| ||| Sbjct 2664 TCTCTTGTTGACATTTTAAAAGAGCGTGGATTACTATCTGAGTCCGATGCTG--TTCAAC 2721 Query 1960 CAC--AAAGGAAACTGAAATGTCTAAATCAA---AC-GAATCTGCTGTAGCCTTTCAAAC 2013 ||| | ||| || ||||| | | |||| || ||| | ||| || || || Sbjct 2722 CACTAATAGGTAA--GAAAT-CATGAGTCAAGTTACTGAACAATCCGTACGTTTCCAGAC 2778 Query 2014 TGCTATCGCTTCTATCAAACTTATTCAAGCATCTTCTGTTCTTGACTTGACAGAGGACGA 2073 ||| | || ||||| || || ||||| || ||| | ||| | || || || || || || Sbjct 2779 CGCTTTGGCCTCTATTAAGCTCATTCAGGCTTCTGCCGTTTTGGATTTAACCGAAGATGA 2838 Query 2074 TTTTGACTTCTTAACTCGCGACCGTGTCTGGATTGCTACCGACCGTTCACGCGCTCGCCG 2133 ||| || || | || | || || ||||||||||| ||||| || || ||||| || Sbjct 2839 TTTCGATTTTCTGACGAGTAACAAAGTTTGGATTGCTACTGACCGCTCTCGTGCTCGTCG 2898 Query 2134 -TGCTATCGAGGCTTGCGTATATGGAACACTGGACTTTGTCGGGTATCCTCGCTTTCCTG 2192 ||| | ||||||||||| ||||| || ||||||||||| || || ||||||||||||| Sbjct 2899 CTGC-GTTGAGGCTTGCGTTTATGGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTG 2957 Query 2193 CTCCTGTTGAGTTTATTTCTGCCGTCATTGCTTATTACGTTCATCCCGTTAACATCCAAA 2252 ||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||| |||| Sbjct 2958 CTCCTGTTGAGTTTATTGCTGCCGTCATTGCTTATTATGTTCATCCCGTCAACATTCAAA 3017 Query 2253 CCGCCTGTCTCATCATGGAAGGTGCTGAGTTTACCGAAAACATCGTCAATGGTGTTGAAC 2312 | |||||||||||||||||||| ||||| ||||| |||||||| | ||||| || || | Sbjct 3018 CGGCCTGTCTCATCATGGAAGGCGCTGAATTTACGGAAAACATTATTAATGGCGTCGAGC 3077 Query 2313 GCCCCGTTAAAGCCTCTGAACTGTTCGCCTTCACTCTTCTTGTTCGCGCCGGAAACAAAG 2372 | || ||||||||| ||||| ||||||| || || | | ||| ||||| ||||||| | Sbjct 3078 GTCCGGTTAAAGCCGCTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAACACTG 3137 Query 2373 ATCTTATCGGTCACGCTGAAACAAACATCCGTGAACAGTTACGCGCTCAAGGTGTCATGT 2432 | || | | |||| ||| |||| | ||| || | ||||| || |||| || |||| Sbjct 3138 ACGTTCTTACTGACGCAGAAGAAAACGTGCGTCAAAAATTACGTGCAGAAGGAGTGATGT 3197 Query 2433 AAAGACCTTTGATTTTATCGTCTTCACTTTTAAGGAGTT----ATGTAATGAAAAAATCA 2488 || | | | | || | || || | | || | | Sbjct 3198 AATG--------TCTAAAGGTAAAAAACGTTCTGGCGCTCGCCCTGGTCGTCCGCAGCCG 3249 Query 2489 ATTCGCCGCTCTGGTGGCAAATCTAAGGGTGCCCGTCTCTGGTATGTAGGCGGAACACAA 2548 | || | || ||||| ||| || || ||||| ||||||||||| || |||| Sbjct 3250 TTGCGAGGTACTAAAGGCAAGCGTAAAGGCGCTCGTCTTTGGTATGTAGGTGGTCAACAA 3309 Query 2549 TACTAATCTTTTATGTGGGACCGCGGTCCCACTCTATTTAAGGATACAAAAATGTCTAAC 2608 | ||| || | ||| | ||| ||| || || |||||| || |||||||| Sbjct 3310 TTTTAA--TTGCA---GGGGCTTCGGCCCC---TTACTTGAGGATA-AATTATGTCTAAT 3360 Query 2609 GTTCAAACATCTGCGGACCGTGTACCTCATGACTTATCTCACCTTGTCTTTGAGGCTGGT 2668 ||||||| || || ||| | || |||||| | || || |||| ||| |||||| Sbjct 3361 ATTCAAACTGGCGCCGAGCGTATGCCGCATGACCTTTCCCATCTTGGCTTCCTTGCTGGT 3420 Query 2669 AAAATTGGCCGCCTCAAAACTATCTCTTGGACGCCTGGTGGTGCTGGTGACTCTTTCGAG 2728 | ||||| || || | || || || || || | | ||||| ||||| |||||| Sbjct 3421 CAGATTGGTCGTCTTATTACCATTTCAACTACTCCGGTTATCGCTGGCGACTCCTTCGAG 3480 Query 2729 TGTGATATGGTTGGCGCTATTCGTCTGTCCCCTCTTCGTCGTGGCCTCGCTGTTGACTCA 2788 || ||||||||| | ||||| || || | ||||||||||| ||| ||||||| Sbjct 3481 ATGGACGCCGTTGGCGCTCTCCGTCTTTCTCCATTGCGTCGTGGCCTTGCTATTGACTCT 3540 Query 2789 CGCGTTGATATCTTTCCTTTCTATATCCCACACCGTCATATCTACGGTCAGCAGTGGATT 2848 || || || ||| |||| ||| |||| || ||||| | || ||| | ||||||||| Sbjct 3541 ACTGTAGACATTTTTACTTTTTATGTCCCTCATCGTCACGTTTATGGTGAACAGTGGATT 3600 Query 2849 AACTTTATGAAGGATGGCGTTAATGCCTCCCCTCTTCCTCCTGTTACATGCTCCTCTGGT 2908 || || ||||||||||| ||||||||| | ||||| || |||||| | | ||||| Sbjct 3601 AAGTTCATGAAGGATGGTGTTAATGCCACTCCTCTCCCGACTGTTA---ACACTACTGGT 3657 Query 2909 T---GGGACTCTGCTGCTTATCTCGGTACCATTCCGTCTTCTACCCTTAAAGTGCCTAAA 2965 | ||| ||| |||| ||| || || ||| || |||| |||| | ||||| Sbjct 3658 TATATTGACCATGCCGCTTTTCTTGGCACGATTAACCCTGATACCAATAAAATCCCTAAG 3717 Query 2966 TTCTTACATCAGGGCTATCTGAATATTTATAATAACTACTTCAAACCGCCTTGGTCTGAT 3025 || |||||| ||| ||||||| ||||| ||||| || ||| |||| || ||| Sbjct 3718 CATTTGTTTCAGGGTTATTTGAATATCTATAACAACTATTTTAAAGCGCCGTG----GAT 3773 Query 3026 GACTTAACTTAC----GCTAACCCATCCAATATGCCT--TC-TGAGGATTATAAATGGGG 3078 | || | | ||| ||||||| | ||| || | || || ||| | | || Sbjct 3774 GCCTGACCGTACCGAGGCTAACC---CTAATGAGCTTAATCAAGATGATGCTCGTTATGG 3830 Query 3079 CGTACGTGTCGCTAACCTTAAATCTATCTGGACTGCGCCACTTCCACCGGATACTCGTAC 3138 | ||| | | || ||| || |||||||| || ||||| || || ||| Sbjct 3831 TTTCCGTTGCTGCCATCTCAAAAACATTTGGACTGCTCCGCTTCCTCCTGAGACTGAGCT 3890 Query 3139 ATCTGAAAACATGACTACTGGTACATCCACTATTGACATTATGGGCCTTCAAGCCGCATA 3198 ||| | ||||| ||| ||| | |||||||||||||||| || ||||| || || Sbjct 3891 TTCTCGCCAAATGACGACTTCTACCACATCTATTGACATTATGGGTCTGCAAGCTGCTTA 3950 Query 3199 CGCTAAATTACATACGGAACAGGAACGTGATTACTTCATGACCCGTTACCGTGACATTAT 3258 ||||| || ||||| || || |||||||||||||||||| ||||||| ||| |||| Sbjct 3951 TGCTAATTTGCATACTGACCAAGAACGTGATTACTTCATGCAGCGTTACCATGATGTTAT 4010 Query 3259 GAAAGAGTTCGGCGGTCATACATCCTATGATGGTGACAATCGTCCTCTTCTGCTCATGCG 3318 || || ||| | || || ||||| | |||||| |||||| | || ||||||| Sbjct 4011 TTCTTCATTTGGAGGTAAAACCTCTTATGACGCTGACAACCGTCCTTTACTTGTCATGCG 4070 Query 3319 CTCTGAATTTTGGGCATCTGGCTATGACGTAGACGGTACTGACCAATCTTCTCTCGGTCA 3378 |||| | | ||||||||||||||||| || || || ||||||||| | || | || || Sbjct 4071 CTCTAATCTCTGGGCATCTGGCTATGATGTTGATGGAACTGACCAAACGTCGTTAGGCCA 4130 Query 3379 ATTCTCTGGTCGCGTTCAGCAGACCTTCAATCACAAAGTCCCACGCTTCTATGTTCCTGA 3438 || |||||||| ||||| ||||||| || || || || || |||| ||||||||| Sbjct 4131 GTTTTCTGGTCGTGTTCAACAGACCTATAAACATTCTGTGCCGCGTTTCTTTGTTCCTGA 4190 Query 3439 GCATCGCGTAATTATGACTCTGGCGGTTACTCGCTTTCCGCCTACT--CATGAAATGGAA 3496 |||| || || | ||||| ||| || ||| |||||||||||| | ||| || Sbjct 4191 GCATGGCACTATGTTTACTCTTGCGCTTGTTCGTTTTCCGCCTACTGCGACTAAA--GAG 4248 Query 3497 ATGCACTATCTTGTAGGTAAAGAAAACTTAACTTATACCGATATTGCTTGTGACCCTGCA 3556 || || || ||| | ||||| || |||||||||||||||||| | ||||||| Sbjct 4249 ATTCAGTACCTTAACGCTAAAGGTGCTTTGACTTATACCGATATTGCTGGCGACCCTGTT 4308 Query 3557 CTG-ATGGCTAACCTGCCACCTCGTGAAGTATCCTTAAAAGAATTCTTCC--ACTCCTCA 3613 || ||||| ||| |||| || |||||| | || | || || | |||| || | | Sbjct 4309 TTGTATGGC-AACTTGCCGCCGCGTGAAATTTCTATGAAGGATGTTTTCCGTTCTGGTGA 4367 Query 3614 CCCGATTCTGCTAAATTCAAAATCGCTGAGGGCCAATGGTATCGT 3658 || ||| || || || || |||||||| || ||||||||| Sbjct 4368 TTCG--TCTAAGAAGTTTAAGATTGCTGAGGGTCAGTGGTATCGT 4410 Score = 163 bits (180), Expect = 1e-36 Identities = 176/233 (76%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 5095 ACATCACGCGAAAATACTAAGGATACTGTCTATGCTCAAAATGAAATGCTCGCGTATAAC 5154 || |||||| | ||||| || || || ||||| |||||||| ||||| || ||| | Sbjct 442 ACTTCACGCCAGAATACGAAAGACCAGGTATATGCACAAAATGAGATGCTTGCTTATCAA 501 Query 5155 CAAAAAGAGTCTATGTCACGCGTTGGCGCTATTCTCGAAAACACAAGCCTCACCAAACAG 5214 || || ||||||| | ||||||| ||||| | |||||||| | || |||| || Sbjct 502 CAGAAGGAGTCTACTGCTCGCGTTGCGTCTATTATGGAAAACACCAATCTTTCCAAGCAA 561 Query 5215 CAACAAACTTCTGAAATTATGCGGCAAATGCTTACTCAGGCTCAAACCGCAGGTCAATAT 5274 || || ||| || |||||||| |||||||||||||| |||||||| || ||||| ||| Sbjct 562 CAGCAGGTTTCCGAGATTATGCGCCAAATGCTTACTCAAGCTCAAACGGCTGGTCAGTAT 621 Query 5275 TTTACAAATGACCAAATCAAGGAGCTTACGAGAAAAGTTGGTGCTGATATTGA 5327 ||||| |||||||||||||| || | || | || ||| ||||||| |||| Sbjct 622 TTTACCAATGACCAAATCAAAGAAATGACTCGCAAGGTTAGTGCTGAGGTTGA 674 Score = 93.3 bits (102), Expect = 1e-15 Identities = 116/159 (73%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 4870 AAGTCTGCCTCTGACAAGGGCAAGGACACAAAAGACTATCTCGCCGCCGCATTCCCCGAG 4929 ||||||||| |||| || || ||||| || || ||||| || || ||||| || ||| Sbjct 217 AAGTCTGCCGCTGATAAAGGAAAGGATACTCGTGATTATCTTGCTGCTGCATTTCCTGAG 276 Query 4930 CTCAACCCATGGGAACGTGCTGGTGCTGGCGCTTCTAGTCCAGGCATGCAAGACGCTGGC 4989 || || | ||||| ||||||||||||| ||||| | | || ||| ||||| || Sbjct 277 CTTAATGCTTGGGAGCGTGCTGGTGCTGATGCTTCCTCTGCTGGTATGGTTGACGCCGGA 336 Query 4990 TTCCAAAATCAGAAGGAGCTAACCAAGATGCAGCTTGAC 5028 || | ||||| || ||||| || || ||||| || ||| Sbjct 337 TTTGAGAATCAAAAAGAGCTTACTAAAATGCAACTGGAC 375 Score = 91.5 bits (100), Expect = 5e-15 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 4563 TATGTTTGGCTCTATCGCTGGCGGTATCGCCTCCGCACTTGCCGGAGGCCTTATGGGTAA 4622 ||||||||| |||| ||||||||||| || || || ||||| || ||| ||| ||| Sbjct 5281 TATGTTTGGTGCTATTGCTGGCGGTATTGCTTCTGCTCTTGCTGGTGGCGCCATGTCTAA 5340 Query 4623 ATTATTTGGCGGCGGTCAGTCCGCCGACTCTACCGGAATCCAAGGCAACGTCCTTGCTTC 4682 ||| ||||| |||||||| |||| ||| || || ||||| | || |||||| | Sbjct 5341 ATTGTTTGGAGGCGGTCAAAAAGCCGCCTCCGGTGGCATTCAAGGTGATGTGCTTGCTAC 5400 Query 4683 CGACAACAATGTTGTAGG 4700 ||| |||||| |||||| Sbjct 5401 CGATAACAATACTGTAGG 5418 Score = 82.4 bits (90), Expect = 3e-12 Identities = 79/100 (79%), Gaps = 1/100 (1%) Strand=Plus/Plus Query 4672 GTCCTTGCTTCCGACAACAATGTTGTAGGTGCTAATGATGCTGGTATTAAATCTGCTATT 4731 || |||||| |||| |||||| |||||| ||||||||||||||||||||| ||| Sbjct 4 GTGCTTGCTACCGATAACAATACTGTAGGCATGGGTGATGCTGGTATTAAATCTGCCATT 63 Query 4732 CAGGGCTCTACTGTCCCTAACTCTCAGGAAGCTGCTCCCT 4771 || ||||||| ||| |||||| || | || || | ||||| Sbjct 64 CAAGGCTCTAATGTTCCTAACCCTGATGAGGCCG-TCCCT 102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17734007016780