Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20equiperdum_20[genbank_20GCA_5F001457755.2_202016-12- 15] 2,026 sequences; 26,228,029 total letters Query= NC_007817.1 Length=5486 Score E Sequences producing significant alignments: (Bits) Value seq289 1710 0.0 >seq289 Length=5418 Score = 1710 bits (1896), Expect = 0.0 Identities = 2346/3246 (72%), Gaps = 104/3246 (3%) Strand=Plus/Plus Query 653 AAGGGTATTAAGGATGAATGCTCGAAAATCCTTGAGGAATCCACCATGAAATCACGTAGA 712 || |||||||||||||| || || | | | || |||| ||||| |||||||| |||||| Sbjct 1417 AAAGGTATTAAGGATGAGTGTTCAAGATTGCTGGAGGCCTCCACTATGAAATCGCGTAGA 1476 Query 713 GGCTTTACCGTACAAAGACTAATGAATGCTATGCGCACTGCCCACACTGAGGGCTGGTAC 772 |||||| | | || | | |||||||| ||||| || || |||| || |||| Sbjct 1477 GGCTTTGCTATTCAGCGTTTGATGAATGCAATGCGACAGGCTCATGCTGATGGTTGGTTT 1536 Query 773 GTTGTATTCGATACTCTTACTCTCGCCGATGACCGCCTTAAGGATTTCTATGATAATCCC 832 | || || || ||||| || | || || ||||| | ||| || |||||||||||| Sbjct 1537 ATCGTTTTTGACACTCTCACGTTGGCTGACGACCGATTAGAGGCGTTTTATGATAATCCC 1596 Query 833 AATGCTCTCCGTGACTATTTCCGTGATATTGGTCGTATGGTTCTCACTGCCGAGGGTCGT 892 |||||| | ||||||||||| ||||||||||||||||||||||| ||||||||||||| Sbjct 1597 AATGCTTTGCGTGACTATTTTCGTGATATTGGTCGTATGGTTCTTGCTGCCGAGGGTCGC 1656 Query 893 TCTGTCCATGATTCATCTTCGGACTGCTATCAGTATTTTTGTGTGCCTGAGTATGGCACC 952 | |||||||| | ||||||||||||||||||||||||||||||||||| | Sbjct 1657 AAGGCTAATGATTCACACGCCGACTGCTATCAGTATTTTTGTGTGCCTGAGTATGGTA-- 1714 Query 953 CAGC--ACGGCCGTTTACATTTTCACGCAGTGCACCTTATGCGCACACTTCCTCTGGGTT 1010 |||| | |||||| | ||||| || || |||||| ||||||| ||||||||| ||| Sbjct 1715 CAGCTAATGGCCGTCTTCATTTCCATGCGGTGCACTTTATGCGGACACTTCCTACAGGTA 1774 Query 1011 CTATCGACCCTAACTTTGGCAAGCTGGTGCGTACTAATCGGCAAATAAATAGCTTGCAAA 1070 | |||||||| ||||| | ||| || | | || || ||||||||||||||| Sbjct 1775 GCGTTGACCCTAATTTTGGTCGTCGGGTACGCAATCGCCGCCAGTTAAATAGCTTGCAAA 1834 Query 1071 ATACATGGCCCTATGGTTACTCTATGCCCATCGCGGTCCGGTACTCCCAAGACGCATTTT 1130 |||| ||||| ||||||||| |||||||||||| || || ||| | || ||||| |||| Sbjct 1835 ATACGTGGCCTTATGGTTACAGTATGCCCATCGCAGTTCGCTACACGCAGGACGCTTTTT 1894 Query 1131 CGCGCGCTGGCTGGCTCTGGCCCGTTGATACAAAGGGCGAACCTCTTAAAGCTACCTCGT 1190 | || |||| ||| | ||||| |||||| | || || || || |||||||||||| | Sbjct 1895 CACGTTCTGGTTGGTTGTGGCCTGTTGATGCTAAAGGTGAGCCGCTTAAAGCTACCAGTT 1954 Query 1191 ATATGGCTGTCGGCTTCTACGTCGCTAAATACGTTAACAAAAAATCAGATATTGACATGG 1250 |||||||||| || ||||| || |||||||||||||||||||| |||||||| ||| | | Sbjct 1955 ATATGGCTGTTGGTTTCTATGTGGCTAAATACGTTAACAAAAAGTCAGATATGGACCTTG 2014 Query 1251 CCTCTAAAGGTCTAGGGAATAAAGAATGGAACAATTCACTCAAAACCAAAATCAACCTGC 1310 | ||||||||||||| ||||||||||||||| ||||| |||||||| | || | Sbjct 2015 CTGCTAAAGGTCTAGGAGCTAAAGAATGGAACAACTCACTAAAAACCAAGCTGTCGCTAC 2074 Query 1311 TGCCCAAGAAAATTTTTCGCATCAGGATGTCTCGCAACTTCGGAATGAAGCTGCACACAA 1370 | |||||||| | || | ||||| ||| ||||||||||| ||||| ||| ||||| Sbjct 2075 TTCCCAAGAAGCTGTTCAGAATCAGAATGAGCCGCAACTTCGGGATGAAAATGCTCACAA 2134 Query 1371 TGAGTCACCTCTCAGCGGAAACTCTAATCCAACTGACCCAAGTGGGCTACGACGTGACCC 1430 ||| | || || |||| |||||||||| ||| | |||| ||||||| ||| | Sbjct 2135 TGACAAATCTGTCCACGGAGTGCTTAATCCAACTTACCAAGCTGGGTTACGACGCGACGC 2194 Query 1431 CGTTCAACAACATCTTGAAGCAGAACGCCAAGAAAGAGCTACGATTGAGGCTGGCAAAGA 1490 |||||||| | || |||||||||||||| || | |||| | |||||||||||| ||| Sbjct 2195 CGTTCAACCAGATATTGAAGCAGAACGCAAAAAGAGAGATGAGATTGAGGCTGGGAAAAG 2254 Query 1491 AATCTGTCGCCGACGTTTTGGAGGCGCAACCTGTGACGACCAATCTGCTAAAATTCATGC 1550 |||| ||||||||||||| |||||||||||||||||| |||||||| ||||| |||| Sbjct 2255 TTACTGTAGCCGACGTTTTGGCGGCGCAACCTGTGACGACAAATCTGCTCAAATTTATGC 2314 Query 1551 GCAATTTGACCCGTCAA----ATCGGAGTGTCCAACCTGCAGAGTTTTATCGCTTCAATG 1606 || || || | || || || || |||||||||||||||||||||||||| ||| Sbjct 2315 GCGCTTCGA----TAAAAATGATTGGCGTATCCAACCTGCAGAGTTTTATCGCTTCCATG 2370 Query 1607 ACAACGAAATTAACAAGTATGGATATTTCTGATGAAACCAAAAACTACGTTGATACTGCA 1666 || ||| |||||| | ||||||||||||||| | ||||| || |||||| ||| Sbjct 2371 ACGCAGAAGTTAACACTTTCGGATATTTCTGATGAGTCGAAAAATTATCTTGATAAAGCA 2430 Query 1667 GGAATTACTGCTACTCACTTACGAATTAAATCGAAGTGGACTGCTGGTGGAAAATGAAGA 1726 ||||||||| || || ||||||||||||||||||||||||||||| ||||||||| | Sbjct 2431 GGAATTACTACTGCTTGTTTACGAATTAAATCGAAGTGGACTGCTGGCGGAAAATGAGAA 2490 Query 1727 AATTCAATCTGAACTTAAAAAATTCGAGAAGCTCTTACTTCGCCACCTTTCGCCATCACC 1786 ||||| | || ||| | ||||||||||||||||| || |||||||||||||| | Sbjct 2491 AATTCGACCTATCCTTGCGCAGCTCGAGAAGCTCTTACTTTGCGACCTTTCGCCATCAAC 2550 Query 1787 TGAACG-TACTGGCAAAGACTGACGCTCTCGACGAGGAAAAATACCTAAATATGCTAGGT 1845 | |||| | ||| |||| |||||||| | || ||||| || | || |||||||| || Sbjct 2551 T-AACGATTCTGTCAAAAACTGACGCGTTGGATGAGGAGAAGTGGCTTAATATGCTTGGC 2609 Query 1846 GCTCTCCTCAAGGACTGGTTCCGTTACGAAGAACATTTCGTACATGGTAAACAATCAATG 1905 | || ||||||||||||| | || || |||||| || ||||||| | | || | Sbjct 2610 ACGTTCGTCAAGGACTGGTTTAGATATGAGTCACATTTTGTTCATGGTAGAGATTCTCTT 2669 Query 1906 CTTGACTTATTAAATGAACGTGGACTATTATC-----CACA---TCAACAACCAACCCAA 1957 ||||| | ||||| || |||||| || |||| | | | |||||| | || Sbjct 2670 GTTGACATTTTAAAAGAGCGTGGATTACTATCTGAGTCCGATGCTGTTCAACCA--CTAA 2727 Query 1958 AAGGAAATACAAAATGA---ACTCTAACGAATCTGCTGTTGCCTTCGCTACTGCTCTCGC 2014 ||| || | | |||| | || ||| | || ||| || ||| | || Sbjct 2728 TAGGTAAGAAATCATGAGTCAAGTTACTGAACAATCCGTACGTTTCCAGACCGCTTTGGC 2787 Query 2015 ATCTATCAAGCTCATTCAGGCTTCATCTGTGCTGGACCTGACCGAAGACGACTTCGATTT 2074 ||||| ||||||||||||||||| | || |||| | |||||||| || |||||||| Sbjct 2788 CTCTATTAAGCTCATTCAGGCTTCTGCCGTTTTGGATTTAACCGAAGATGATTTCGATTT 2847 Query 2075 CTTAACCCGTGACCGTGTATGGATTGCCACTGACCGCTCCCGTGCTCGCCGCGCTATTGA 2134 | || || || || |||||||| ||||||||||| |||||||| ||| |||| Sbjct 2848 TCTGACGAGTAACAAAGTTTGGATTGCTACTGACCGCTCTCGTGCTCGTCGCTGCGTTGA 2907 Query 2135 GGCCTGCGTATATGGTACATTGGACTTTGTCGGATACCCTCGCTTTCCTGCTCCTGTTGA 2194 ||| ||||| |||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct 2908 GGCTTGCGTTTATGGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTCCTGTTGA 2967 Query 2195 GTTTATTGCTGCCGTCATTGCTTATTATGTTCATCCCGTTAACATCCAGACAGCATGTCT 2254 ||||||||||||||||||||||||||||||||||||||| ||||| || || || ||||| Sbjct 2968 GTTTATTGCTGCCGTCATTGCTTATTATGTTCATCCCGTCAACATTCAAACGGCCTGTCT 3027 Query 2255 TATTATGGAAGGCGCCGAGTTCACCGAAAATATTATCAATGGTATTGACCAGCCAGTTAA 2314 || ||||||||||| || || || ||||| ||||| ||||| | || | || ||||| Sbjct 3028 CATCATGGAAGGCGCTGAATTTACGGAAAACATTATTAATGGCGTCGAGCGTCCGGTTAA 3087 Query 2315 GGCCGCTGAACTATTCGCTTTTACCCTGCGTGTACGCGCCGGAAACACTGACCATGTTAC 2374 ||||||||| | ||||| |||||| ||||||||||||| |||||||||||| | |||| Sbjct 3088 AGCCGCTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAACACTGACGTTCTTAC 3147 Query 2375 ACATGCAGAAACTAACGTACGTGAACAATTACGTGCTCAAGGAGTAATGTAATGGCTAAA 2434 | |||||| ||||| ||| || |||||||||| ||||||| |||||||| ||||| Sbjct 3148 TGACGCAGAAGAAAACGTGCGTCAAAAATTACGTGCAGAAGGAGTGATGTAATGTCTAAA 3207 Query 2435 ---------------GGCTCTCG---TCGGCGTTC---GCCGTCCCG-----CT------ 2462 ||| |||| | | ||| | ||||| || || Sbjct 3208 GGTAAAAAACGTTCTGGCGCTCGCCCTGGTCGTCCGCAGCCGTTGCGAGGTACTAAAGGC 3267 Query 2463 ----CTAAAGGTGCTCGCCTCTGGTATGTTGGCGGCACACAATTCTAATCTTCTAGGGGC 2518 |||||| ||||| || |||||||| || || |||||| ||| || |||||| Sbjct 3268 AAGCGTAAAGGCGCTCGTCTTTGGTATGTAGGTGGTCAACAATTTTAA--TTGCAGGGGC 3325 Query 2519 TTCGGCCCCTCTATTTAAGGATATAAAATGTCTAACGTTCAAACTTCCGCTGACCGCATT 2578 |||||||||| || || |||||| | |||||||| |||||||| ||| || || || Sbjct 3326 TTCGGCCCCT-TACTTGAGGATAAATTATGTCTAATATTCAAACTGGCGCCGAGCGTATG 3384 Query 2579 CCTAACGACCTTTCTCACCTCGTCTTCGAGGCTGGTAAAATCGGCCGTTTAAAAACTATC 2638 || | |||||||| || || | |||| |||||| | || || ||| | | || || Sbjct 3385 CCGCATGACCTTTCCCATCTTGGCTTCCTTGCTGGTCAGATTGGTCGTCTTATTACCATT 3444 Query 2639 TCCTGGACTCCAGTTGTCGCTGGCGACTCATTTGAAACTGAGATGGTAGGCGCTATTCGC 2698 || ||||| ||| ||||||||||||| || || | || || |||||| | || Sbjct 3445 TCAACTACTCCGGTTATCGCTGGCGACTCCTTCGAGATGGACGCCGTTGGCGCTCTCCGT 3504 Query 2699 CTTTCTCCACTCCGTCGCGGCCTTGCCGTCGACTCTCGCGTGGATATCTTCTCTTTCTAT 2758 ||||||||| | ||||| |||||||| | |||||| || || || || |||| ||| Sbjct 3505 CTTTCTCCATTGCGTCGTGGCCTTGCTATTGACTCTACTGTAGACATTTTTACTTTTTAT 3564 Query 2759 ATTCCGCATCGTCATATCTATGGTCAAGAATTCATTGAATTCATGAAAGCTGGCGTTAAT 2818 | || |||||||| | |||||| || | | ||| | |||||||| | ||| |||||| Sbjct 3565 GTCCCTCATCGTCACGTTTATGGTGAACAGTGGATTAAGTTCATGAAGGATGGTGTTAAT 3624 Query 2819 GCCACTCCTCTCGCACCTGTT---ACTACTGCCTCTGGCTGGGATGCTTCTGCCTATCTT 2875 |||||||||||| | ||||| ||||||| | | || | | || | |||| Sbjct 3625 GCCACTCCTCTCCCGACTGTTAACACTACTGGTTAT---ATTGACCATGCCGCTTTTCTT 3681 Query 2876 GGCACTATTCCATCCTCAAACC-TCAAGGTTCCTAAATTCTTACATCAAGGATACCTTAA 2934 ||||| ||| | ||| | ||| || | ||||| || ||| || || | || Sbjct 3682 GGCACGATT-AACCCTGATACCAATAAAATCCCTAAGCATTTGTTTCAGGGTTATTTGAA 3740 Query 2935 TATTTACAACAACTACTTTAAGCCACCGTGGGATG-CTGACCTTACATACGCTAACCCAT 2993 ||| || |||||||| ||||| | |||| ||||| |||||| ||| | ||||||| Sbjct 3741 TATCTATAACAACTATTTTAAAGCGCCGT-GGATGCCTGACCGTACCGAGGCTAACC--- 3796 Query 2994 CTAACATGCCTGAACAGGATTA---TAAATGGGGCGTTCG-TGTCGCTAACTTAAAATCT 3049 |||| || | | || ||| | | | || | || || || | || |||| | Sbjct 3797 CTAATGAGCTTAATCAAGATGATGCTCGTTATGGTTTCCGTTGCTGCCATCTCAAAAAC- 3855 Query 3050 ATCTGGACCGCCCCCTTACCTCCTAACTCTAAAACATCAGAGACTATGACCACTGGCGCT 3109 || ||||| || || | |||||| | || | || ||||| ||| | Sbjct 3856 ATTTGGACTGCTCCGCTTCCTCCTGAGACTGAGCTTTCTCGCCAAATGACGACTTCTACC 3915 Query 3110 ACGTCTATTGATATTATGGGCCTGCAAGCTGCTTATGCTAAATTGCACACCCAACAAGAA 3169 || |||||||| |||||||| |||||||||||||||||||| ||||| || | |||||| Sbjct 3916 ACATCTATTGACATTATGGGTCTGCAAGCTGCTTATGCTAATTTGCATACTGACCAAGAA 3975 Query 3170 CGTGACTACTTCATGACTCGCTATCGCGATATTATGAAAGACTTCGGAGGTCACACCTCC 3229 ||||| ||||||||| || || | ||| |||| || |||||| | ||||| Sbjct 3976 CGTGATTACTTCATGCAGCGTTACCATGATGTTATTTCTTCATTTGGAGGTAAAACCTCT 4035 Query 3230 TATGACGGTGATAACCGTCCTCTGCTGCTTATGCGCTCTGAATTTTGGGCCTCTGGCTAT 3289 ||||||| ||| ||||||||| | || | ||||||||| | | ||||| ||||||||| Sbjct 4036 TATGACGCTGACAACCGTCCTTTACTTGTCATGCGCTCTAATCTCTGGGCATCTGGCTAT 4095 Query 3290 GACGTCGACGGTACTGACCAATCCTCTTTAGGTCAGTTCTCCGGTCGCGTCCAACAAACA 3349 || || || || ||||||||| | || ||||| ||||| || ||||| || ||||| || Sbjct 4096 GATGTTGATGGAACTGACCAAACGTCGTTAGGCCAGTTTTCTGGTCGTGTTCAACAGACC 4155 Query 3350 TTCAATCACAAAGTACCTCGCTTCTATGTACCTGAACACGGCGTCATTATGACTCTCGCC 3409 | || || || || || |||| ||| ||||| || ||| || | ||||| || Sbjct 4156 TATAAACATTCTGTGCCGCGTTTCTTTGTTCCTGAGCATGGCACTATGTTTACTCTTGCG 4215 Query 3410 GTTACTCGCTTCCCTCCTACT--CATGAAATGGAGATGCACTATCTTGTCGGTAAAGAAT 3467 || ||| || || |||||| | ||| ||||| || || ||| || ||||| Sbjct 4216 CTTGTTCGTTTTCCGCCTACTGCGACTAAA--GAGATTCAGTACCTTAACGCTAAAGGTG 4273 Query 3468 CTTTAACCTATACCGACCTCGCCTGCGACCCTGCTCT-TATGGCTAACCTGCCTCCGCGC 3526 |||| || |||||||| | || ||||||||| | | |||||| ||| |||| ||||| Sbjct 4274 CTTTGACTTATACCGATATTGCTGGCGACCCTGTTTTGTATGGC-AACTTGCCGCCGCGT 4332 Query 3527 GAAGTATCCCTTAAGGAATTCTTCCACTCCTCGCCGGACTCCGCT---AAGTTCAAAATT 3583 ||| | || | ||||| | |||| | || | || || || ||||| || ||| Sbjct 4333 GAAATTTCTATGAAGGATGTTTTCC-GTTCTGG--TGATTCGTCTAAGAAGTTTAAGATT 4389 Query 3584 GCCGAGGGCCAATGGTATCG-CACGCAGCCT--GACCGCGTCGCATTCCCTTATAACGCA 3640 || ||||| || |||||||| | || |||| | | || | | ||||| || Sbjct 4390 GCTGAGGGTCAGTGGTATCGTTATGC-GCCTTCGTATGTTTCTCCT--GCTTATCACCTT 4446 Query 3641 CTTGACGGCTTTCCTTTCTACTC-TGCTCTGCCGTCTACTGACTTAAAACAACGTGTCCT 3699 ||||| ||||| || ||| | || | | ||| ||| ||| || || |||| || || Sbjct 4447 CTTGAAGGCTTCCCATTC-ATTCAGGAACCGCCTTCTGGTGATTTGCAAGAACGCGTACT 4505 Query 3700 AGTTAACACTGATAACTACGACGAAATCTTTCAGTCTATGCAACTCGCACACTGGAATAT 3759 || | || | || ||| | || ||||| | || | || ||||||| Sbjct 4506 TATTCGCCACCATGATTATGACCAGTGTTTCCAGTCCGTTCAGTTGTTGCAGTGGAATAG 4565 Query 3760 GCAAACTAAATTTAATACTACCGTCTATAGACATATGCCTACGACTCGTGATTCAATCAT 3819 || |||||||||| ||||| ||| | || |||| || ||||| ||||||||||| Sbjct 4566 TCAGGTTAAATTTAATGTGACCGTTTATCGCAATCTGCCGACCACTCGCGATTCAATCAT 4625 Query 3820 GACGTC 3825 ||| || Sbjct 4626 GACTTC 4631 Score = 167 bits (184), Expect = 8e-38 Identities = 175/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 5013 TCCCGGCAAAATACTAAGGATGCTGTCTATGCTCAAAACGAGATGCTCGAATATAACCAA 5072 || || || ||||| || || || ||||| ||||| |||||||| | ||| | || Sbjct 445 TCACGCCAGAATACGAAAGACCAGGTATATGCACAAAATGAGATGCTTGCTTATCAACAG 504 Query 5073 AAAGAATCTATGTCACGCGTTGGCTCTATTCTCGAAAACACAAGCCTCACCAAACAACAA 5132 || || |||| | ||||||| |||||| | |||||||| | || |||| ||||| Sbjct 505 AAGGAGTCTACTGCTCGCGTTGCGTCTATTATGGAAAACACCAATCTTTCCAAGCAACAG 564 Query 5133 CAAACTTCTGAAATTATGCGGCAGATGCTTACTCAAGCTCAAACCGCAGGTCAACATTTT 5192 || ||| || |||||||| || |||||||||||||||||||| || ||||| ||||| Sbjct 565 CAGGTTTCCGAGATTATGCGCCAAATGCTTACTCAAGCTCAAACGGCTGGTCAGTATTTT 624 Query 5193 ACAAATGACCAAATCAAAGAACTTACACGAAAAGTTGGTGCTGATATTGA 5242 || |||||||||||||||||| | || || || ||| ||||||| |||| Sbjct 625 ACCAATGACCAAATCAAAGAAATGACTCGCAAGGTTAGTGCTGAGGTTGA 674 Score = 127 bits (140), Expect = 7e-26 Identities = 315/472 (67%), Gaps = 17/472 (4%) Strand=Plus/Plus Query 4138 TAATCAGGTCTTCTCCGTCTGTGCTCACATCACATCTGACGTGGACCCTAAATATATTGC 4197 ||||||||| | || || ||||| | || | | ||| | |||||||||| | |||| Sbjct 4952 TAATCAGGTTGTTTCTGTTGGTGCTGATATTGCTTTTGATGCCGACCCTAAATTTTTTGC 5011 Query 4198 GTGCCTCGTTCGCTTTGAGGTCACTGCTGGTACCACTCCTACCGCTATGCCTCCTGTCTA 4257 || | |||||||||||| || | | | | ||| | || | || ||| ||| Sbjct 5012 CTGTTTGGTTCGCTTTGAGTCTTCTTCGGTTCCGACTAC--CCTC----CCGACTGCCTA 5065 Query 4258 TGATGCTTACCCTATCGCTGGTTACTATGACGCTGGCTCTTATACTGTTGAAGACTGCGC 4317 ||||| ||| ||| | | |||| | |||| | ||| | |||||| || | ||||| | Sbjct 5066 TGATGTTTATCCTTTGGATGGTCGCCATGATGGTGGTTATTATACCGTCAAGGACTGTGT 5125 Query 4318 TACTATT--CCTACTCACGCTGTCTCTTCTGGCAACGATGTATATGTCGGCCTTATGCTT 4375 |||||| | | || | | | | | ||||| |||| ||||| || | ||| || Sbjct 5126 GACTATTGACGTCCTTCCCCGTACGC--CGGGCAATAATGTTTATGTTGGTTTCATGGTT 5183 Query 4376 TTCTCTCGCATGTGGCCCGTTGCAAAACTATCCGGTATCGCTTCCCTTAATCAGGTAAAC 4435 | ||| | | ||| | | ||| ||| | | ||| || |||||||| | Sbjct 5184 TGGTCTAACTTTA---CCGCTACTAAATGCCGCGGATTGGTTTCGCTGAATCAGGTTATT 5240 Query 4436 AAGGAAGTAACCGTTCTCCAACCTCTTAAATAAGGT-ATTCTCTATGTTTGGTGCAATCG 4494 || || | | |||||| || ||||| | |||| ||| |||||||||||| || | Sbjct 5241 AAAGAGATTATTTGTCTCCAGCCACTTAAGTGAGGTGATT---TATGTTTGGTGCTATTG 5297 Query 4495 CTGGCGGTATCGCCTCATCTCTTGCTGGCGGACTCATCAACAAAGCCTTTGGGGGCGGTC 4554 |||||||||| || || |||||||||| || ||| ||| ||||| ||||||| Sbjct 5298 CTGGCGGTATTGCTTCTGCTCTTGCTGGTGGCGCCATGTCTAAATTGTTTGGAGGCGGTC 5357 Query 4555 AATCCGCCTCCTCTACTGGCGTTCAAGGTGATGTCCTCGCTTCTGACAATAA 4606 || ||| |||| |||| ||||||||||||| || ||| | || || || Sbjct 5358 AAAAAGCCGCCTCCGGTGGCATTCAAGGTGATGTGCTTGCTACCGATAACAA 5409 Score = 123 bits (136), Expect = 9e-25 Identities = 107/133 (80%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 4789 CTGCTGCTGATAAAGGCAAGGACACAAAGGATTATCTTGCTTCTGCATTCCCCGACCTCA 4848 |||| ||||||||||| ||||| || |||||||||||| ||||||| || || || | Sbjct 221 CTGCCGCTGATAAAGGAAAGGATACTCGTGATTATCTTGCTGCTGCATTTCCTGAGCTTA 280 Query 4849 ACCCGTGGGAACGTGCTGGCGCTGGTGCTTCGTCTGCTGGCATGGTTGACGCTGGCTTCC 4908 | | ||||| |||||||| |||| |||||| |||||||| ||||||||||| || || Sbjct 281 ATGCTTGGGAGCGTGCTGGTGCTGATGCTTCCTCTGCTGGTATGGTTGACGCCGGATTTG 340 Query 4909 AAAACCAAAAAGA 4921 | || |||||||| Sbjct 341 AGAATCAAAAAGA 353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17442813469590